Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	SSTP.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G20160 874 / 0 ATSBT5.2 Subtilisin-like serine endopeptidase family protein (.1.2) AT1G20150 766 / 0 Subtilisin-like serine endopeptidase family protein (.1) AT2G04160 526 / 9e-177 AIR3 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) AT5G67360 499 / 1e-166 ARA12 Subtilase family protein (.1) AT5G59810 499 / 2e-166 ATSBT5.4 Subtilase family protein (.1) AT5G59090 490 / 2e-163 ATSBT4.12 subtilase 4.12 (.1.2.3) AT5G59100 475 / 1e-157 Subtilisin-like serine endopeptidase family protein (.1) AT5G59120 474 / 2e-157 ATSBT4.13 subtilase 4.13 (.1) AT4G34980 474 / 5e-157 SLP2 subtilisin-like serine protease 2 (.1) AT3G14067 469 / 7e-155 Subtilase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G018600 [exp] 1150 / 0 AT1G20160 889 / 0.0 Subtilisin-like serine endopeptidase family protein (.1.2) Potri.003G189200 [exp] 587 / 0 AT1G20160 583 / 0.0 Subtilisin-like serine endopeptidase family protein (.1.2) Potri.011G050300 [exp] 526 / 9e-177 AT2G04160 786 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Potri.011G050000 [exp] 525 / 2e-176 AT2G04160 806 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Potri.011G050100 [exp] 523 / 1e-175 AT2G04160 784 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Potri.001G469000 [exp] 516 / 8e-173 AT5G59810 754 / 0.0 Subtilase family protein (.1) Potri.011G165900 [exp] 515 / 1e-172 AT2G04160 882 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Potri.001G468800 [exp] 513 / 1e-171 AT5G59810 939 / 0.0 Subtilase family protein (.1) Potri.014G171600 [exp] 506 / 3e-169 AT2G04160 986 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034544 [exp] 868 / 0 AT1G20160 846 / 0.0 Subtilisin-like serine endopeptidase family protein (.1.2) Lus10039087 [exp] 526 / 7e-177 AT2G04160 810 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Lus10016064 [exp] 523 / 5e-175 AT2G04160 975 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Lus10023048 [exp] 519 / 6e-174 AT5G59810 762 / 0.0 Subtilase family protein (.1) Lus10039086 [exp] 518 / 1e-173 AT5G59810 850 / 0.0 Subtilase family protein (.1) Lus10038774 [exp] 509 / 4e-170 AT5G59810 839 / 0.0 Subtilase family protein (.1) Lus10014591 [exp] 516 / 4e-169 AT2G04160 716 / 0.0 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) Lus10002780 [exp] 501 / 7e-167 AT5G45650 909 / 0.0 subtilase family protein (.1) Lus10038772 [exp] 498 / 5e-166 AT5G59810 815 / 0.0 Subtilase family protein (.1) Lus10039085 [exp] 493 / 5e-164 AT5G59810 827 / 0.0 Subtilase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00082 [poplar] [flax] Peptidase_S8 Subtilase family CL0570 [poplar] [flax] PPP-I PF05922 [poplar] [flax] Inhibitor_I9 Peptidase inhibitor I9
Representative CDS sequence Show only first row Show all	>Potri.005G243000.2 pacid=42802779 polypeptide=Potri.005G243000.2.p locus=Potri.005G243000 ID=Potri.005G243000.2.v4.1 annot-version=v4.1 ATGAAATATTCTGCCCTATGCTATGTGCTGTTCCTTATCCTCTTTGATGTATTTCTGGTAAAATCAGGAGCAGACGAGGGAGAGAAGGATGGTGTTTATA TTGTTTACATGGGAGCTGCGACAGCAAATGGTTCTTCAAAGAATGAACATGCCCAGCTTCTGAGCTCTGTCTTAAAACGGAGAAAGAATGCTCTAGTGCA CAGCTACGAACATGGAATTTCAGGGTTTACAGCTCGTTTATCAGCAGCAGAGGCACAATCAATTGCTAAAAACCCAGGGGTCGTATCAGTTTTTCCTGAT CCTGTCTACCAACTCCACACAACTCGTTCATGGGATTTCTTGAAATACGGAACCGATGTAAAGATCGACTTGAGCCCAAATTCTGACTCTAACTTATCTT CTCGAGGATATGATGTGATCATTGGAATCCTGGATACAGGTATTTGGCCCGAGTCTAAGAGTTTTAGTGACAAGGATATGGATCCAATACCATCAAGCTG GAAGGGTACCTGTGTCGAAGCTCGAGATTTCAACTCATCCAATTGTAATAGAAAATTAATTGGAGCAAGATCTTACAATGGCCCTGGCGATGACGATGAC GGACTTGTTAATACACCAAGAGATATGAATGGTCATGGCACTCATGTAGCTTCGACTGCAGCAGGAATTATGGTCCCTGGTGCATCTTACCATGGATTAG CTTCCGGGACTGCGAAAGGTGGATCACTTGGGTCAAGGATTGCTGTGTACAGAATATGTACGCCAAACGGATGTGCTGGGTCCAGTATATTAGCTGCATT CAGTGATGCCATTAAAGACGGTGTTGATATACTATCATTGTCACTAGGTTCACCAGCATCACGCATCTCCGATTTTAAGGAAGATCCAATAGCCATTGGA GCGTTCCACGCTGTTGAGAATGGTATCACCGTGGTCTGCTCTGCAGGGAACGATGGGCCATCGGAAAAAACTGTTTCGAATGGTGCGCCCTGGATTCTGA CAGTTGCTGCAACAACCATAGATCGGAGATTCGAGTCTAATGTTGTGCTTGATAAAAAAAAGGTGATCAAGGGTGAAGCCATAAATTTTGCCAATATTGG AAAATCTCCAGTACATCCATTGATTTATGCGAAGTCAGCTAAGAAGGCCGGTGCGGACGCAAGGGATGCCAGAAACTGCTACCCAGATTCTATGGATGGG AAAAAGATCAAAGGAAAAATCGTCATCTGTGACAATGATGAAGATATAAACTCATATTATAAGATGAACGAGGTGCGGAACTTGGAAGGAATTGGTGCTG TCTTGGTCAGCGACAAGACAAATGGAGATGCATCTGATTTCGATGAATTTCCAATGACTGTGATCAGATCAAAGGATGCTGTCGAGATCTTTGCCTACCT AAACTCAACCAAAAATCCAGTTGCAACAATCCTACCCACCACAGTGGTGTCACAATATAAGCCAGCACCTGCTATCGCCTACTTTTCATCCAGAGGGCCT TCCTCCATCTCAAGAAATATCCTCAAGCCTGATATAGCGGCACCGGGATCAAACATACTGGCAGCTTGGACGGCCTATGATGGAGAAGTAACTGATGAAG GTAGAGAAATCCCAAAATTTAAAATTATGTCAGGAACCTCCATGTCATGTCCGCATGTTTCTGGAATGGCTGCTGTGCTCAAATCCCATTACCCCTCTTG GAGTCCCTCTGCTATCAAGTCTGCCATTATGACAACAGCATCTCAGATAAACAATATGAAGGCCCCAATAACAACAGAGTTAGGTGCTATTGCCACAGCT TATGATTATGGGGCGGGTGAAATGAGCACGAACGGAGCATTGCAACCAGGGCTAGTTTATGAAACCACCGCCATTGACTACTTATACTTCCTGTGCTATC ACGGGTACAATATATCCACAATTAAAGTTATTTCCAAAGATGTTCCAGCTGGTTTTGCTTGTCCGAAGGAATCAAAAGTCAATATGATATCCAATATCAA CTATCCGTCAATAGCAGTTTTCAACCTCACTGGAAAACACAGTAGGAACATTACCAGAACCCTCACAAACGTTGCTGGAGATGGTACCGCAACTTACTCT CTAACAATTGAAGCACCTATTGGTCTAACAGTCACCGTGACTCCAACTAGCTTGCAGTTCACAAAGAACGGCCAAAGACTGGGTTATCACATAATTTTCA CTCCAACTGTCTCTTCATTACAGAAAGACATGTTCGGGTCAATTACATGGAGAACCAAAAAATTTAATGTCCGCACTCCGTTCGTCGCAAGTAGTAGGTG A
AA sequence Show only first row Show all	>Potri.005G243000.2 pacid=42802779 polypeptide=Potri.005G243000.2.p locus=Potri.005G243000 ID=Potri.005G243000.2.v4.1 annot-version=v4.1 MKYSALCYVLFLILFDVFLVKSGADEGEKDGVYIVYMGAATANGSSKNEHAQLLSSVLKRRKNALVHSYEHGISGFTARLSAAEAQSIAKNPGVVSVFPD PVYQLHTTRSWDFLKYGTDVKIDLSPNSDSNLSSRGYDVIIGILDTGIWPESKSFSDKDMDPIPSSWKGTCVEARDFNSSNCNRKLIGARSYNGPGDDDD GLVNTPRDMNGHGTHVASTAAGIMVPGASYHGLASGTAKGGSLGSRIAVYRICTPNGCAGSSILAAFSDAIKDGVDILSLSLGSPASRISDFKEDPIAIG AFHAVENGITVVCSAGNDGPSEKTVSNGAPWILTVAATTIDRRFESNVVLDKKKVIKGEAINFANIGKSPVHPLIYAKSAKKAGADARDARNCYPDSMDG KKIKGKIVICDNDEDINSYYKMNEVRNLEGIGAVLVSDKTNGDASDFDEFPMTVIRSKDAVEIFAYLNSTKNPVATILPTTVVSQYKPAPAIAYFSSRGP SSISRNILKPDIAAPGSNILAAWTAYDGEVTDEGREIPKFKIMSGTSMSCPHVSGMAAVLKSHYPSWSPSAIKSAIMTTASQINNMKAPITTELGAIATA YDYGAGEMSTNGALQPGLVYETTAIDYLYFLCYHGYNISTIKVISKDVPAGFACPKESKVNMISNINYPSIAVFNLTGKHSRNITRTLTNVAGDGTATYS LTIEAPIGLTVTVTPTSLQFTKNGQRLGYHIIFTPTVSSLQKDMFGSITWRTKKFNVRTPFVASSR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G20160		ATSBT5.2	Subtilisin-like serine endopep...		Potri.005G243000 [exp]	0	1	SSTP.3
AT2G26560		PLP2, PLAIIA, P...	PATATIN-LIKE PROTEIN 2, phosph...		Potri.019G014405 [exp]	1.73	0.8777
AT4G20990		ATACA4, ACA4	A. THALIANA ALPHA CARBONIC ANH...		Potri.016G043700 [exp]	2.82	0.8686
AT1G20160		ATSBT5.2	Subtilisin-like serine endopep...		Potri.002G018600 [exp]	5.29	0.8367	Pt-SSTP.2
AT4G33910			2-oxoglutarate (2OG) and Fe(II...		Potri.009G091000 [exp]	10.00	0.7587
AT3G43630			Vacuolar iron transporter (VIT...		Potri.002G069400 [exp]	10.09	0.8677
AT4G02590	bHLH	bHLH059, UNE12	unfertilized embryo sac 12, ba...		Potri.005G217800 [exp]	11.83	0.8191
AT1G43650			nodulin MtN21 /EamA-like trans...		Potri.005G192100 [exp]	12.48	0.8651
AT3G57200			unknown protein		Potri.006G045500 [exp]	12.64	0.8331
AT3G15990		SULTR3;4	sulfate transporter 3;4 (.1)		Potri.003G056200 [exp]	18.13	0.7610	SULTR3.6
AT1G19630		CYP722A1	"cytochrome P450, family 722, ...		Potri.002G033000 [exp]	18.76	0.8085	Pt-CYP722.2

Compare expression of checked genes

Potri.005G243000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.