Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP709.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G46950 528 / 0 CYP709B2 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) AT4G27710 508 / 7e-177 CYP709B3 "cytochrome P450, family 709, subfamily B, polypeptide 3", cytochrome P450, family 709, subfamily B, polypeptide 3 (.1) AT2G46960 497 / 1e-172 CYP709B1 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) AT2G26710 361 / 3e-119 CYP72B1, CYP734A1, BAS1 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) AT3G14640 320 / 2e-103 CYP72A10 "cytochrome P450, family 72, subfamily A, polypeptide 10", cytochrome P450, family 72, subfamily A, polypeptide 10 (.1) AT1G75130 317 / 2e-102 CYP721A1 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) AT3G14630 312 / 1e-100 CYP72A9 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) AT3G14610 310 / 2e-99 CYP72A7 "cytochrome P450, family 72, subfamily A, polypeptide 7", cytochrome P450, family 72, subfamily A, polypeptide 7 (.1) AT3G14690 306 / 2e-98 CYP72A15 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1) AT3G14660 306 / 4e-98 CYP72A13 "cytochrome P450, family 72, subfamily A, polypeptide 13", cytochrome P450, family 72, subfamily A, polypeptide 13 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G154500 [exp] 369 / 3e-122 AT2G26710 789 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.018G070900 [exp] 368 / 4e-122 AT2G26710 796 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.002G134500 [exp] 346 / 4e-113 AT1G75130 540 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Potri.010G139400 [exp] 342 / 8e-112 AT2G26710 402 / 2e-135 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.002G263800 [exp] 339 / 5e-111 AT1G75130 493 / 2e-171 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Potri.011G117600 [exp] 335 / 1e-109 AT3G14620 479 / 7e-166 "cytochrome P450, family 72, subfamily A, polypeptide 8", cytochrome P450, family 72, subfamily A, polypeptide 8 (.1) Potri.005G035200 [exp] 333 / 9e-109 AT1G75130 547 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Potri.017G114200 [exp] 333 / 3e-108 AT5G38450 724 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Potri.004G100400 [exp] 331 / 8e-108 AT5G38450 734 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025756 [exp] 527 / 0 AT2G46950 578 / 0.0 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) Lus10025755 [exp] 535 / 2e-179 AT1G80300 923 / 0.0 nucleotide transporter 1 (.1) Lus10035907 [exp] 440 / 9e-150 AT2G46950 498 / 7e-172 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) Lus10033044 [exp] 375 / 3e-124 AT2G26710 803 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10016310 [exp] 346 / 1e-113 AT1G75130 596 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Lus10026085 [exp] 342 / 1e-111 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10026084 [exp] 337 / 1e-109 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10017775 [exp] 333 / 4e-107 AT3G14630 359 / 2e-117 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) Lus10010821 [exp] 324 / 6e-105 AT1G75130 522 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Lus10017771 [exp] 323 / 7e-105 AT2G26710 705 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.006G022200.1 pacid=42770325 polypeptide=Potri.006G022200.1.p locus=Potri.006G022200 ID=Potri.006G022200.1.v4.1 annot-version=v4.1 ATGATGGTTTACACTTACGTGGGCTACTTCGCAGCAGGTTTGGCTGTTCAGGTTCTTGTTGCAAAGATCTTGAAATTATGCTGGATTGTCCTGTGGAGGC CATATGCCTTGATTAAAAGCTTTGAAAAGCAAGGAATCAAAGGGCCATCCTACTCTATCCTCCACGGTACTCTTCCTGAAATGAAGACCCTGCTAAAAGC TGCGAATGAAGTGATACTAGATACAAACTGCCATGACATCGCTCAAAGAGTTCAGCCGCACTATAATAGATGGTCCGCTGAATATGGAGAGGTATTTTTG TTCTGGCGTGGGGTGCAACCAGCAATAAGGATAGCAGACCCTAAGTTAGCCAAGCAGATACTATCAGATAAGTCTGGTGCCTATGCGCAACCACAGTTCG ACCACAGATTATTATCATTCGCGGGGAATGGAGTGGGTCAGTTGAATGGACCAGACTGGGTTAGACACAGAAGTATTCTCACTCCTGCCTTCACCAAGGA CAAGCTCAAGCTTATGACAAAGAGAATGGCATCATGCACCATAGACATGATTGACGATTGGAAAAATAGGGCTCGAATAGCTGACCATCAAAATATCACG ATAGAAATGAGTGAAGAGTTTAAAAGGCTCACTTGTGATGTAATTACTCATACTGCCTTTGGGAGTAACTATGTTGAAGGCGGAGAAGTCTTTAAAGCAC AAGACGAGCTTATACACCATTGCGTTGCTACTATGGCAGACCTTTACATCCCTGGCAGCCGATTTCTTCCTACACCATCAAACCGTCAAATGTGGAAGAT GGAAAACAATGTGAACAACTCACTGAGACGCTTAATACAGGGGAGACTAGAGTCGGCCCAAGCTAGAGGAAATTTAGATGGATGTTATGGGGATGATGTA CTTGGTTTACTGGTTGAAGCCTCAAAAACTACCAATAAGAGTCTCAAGTTGACAATGGATGAAATCATAGACGAGTGCAAGCAATTCTTCTTTTCTGGCC ACGAGACCACTGCCAAACTATTAACTTGGACCGTTTTCTTGTTGAGCTTGCATCAAGAATGGCAAGAAAGACTGAGGGAAGAGGTGCTGACGGAATGCGG GATGGGAATTCCTGATGCAGATATGGTTTCCAAGTTAAAATTGCTGAACATGGTTCTTCTTGAGACTTTGAGGCTGTATTGTCCTGTACTGGAAACCCTC AGGGAGACATCAAGAGCTACGAAACTAGGGGATTTCCTGATTCCAAAGGGTGTGTTCATAACAATTCAACTGGTGCAGCTGCATAGGAGTAAAGAATACT GGGGAGAGGATGCGAACGATTTCAATCCATTAAGGTTCAAGAATGGAGTATCTCAGGCTGCAAAACACCCAAATGCTTTCCTCGGCTTCGGAATGGGTCC GAGAACTTGCCTTGGTCAGAATTTCGCGATGCTGGAGGTGAAATTGGTGCTTTCGTTATTGCTTCAAAGGTTTTCTTTCTTCCTCTCTCCAGAGTATAAG CATGCACCAGCTAACTACTTGACCATGGAGGCACAATATGGCGTCCCTACTATTGTGAAGCCGCTTCTTTCAAAATAA
AA sequence Show only first row Show all	>Potri.006G022200.1 pacid=42770325 polypeptide=Potri.006G022200.1.p locus=Potri.006G022200 ID=Potri.006G022200.1.v4.1 annot-version=v4.1 MMVYTYVGYFAAGLAVQVLVAKILKLCWIVLWRPYALIKSFEKQGIKGPSYSILHGTLPEMKTLLKAANEVILDTNCHDIAQRVQPHYNRWSAEYGEVFL FWRGVQPAIRIADPKLAKQILSDKSGAYAQPQFDHRLLSFAGNGVGQLNGPDWVRHRSILTPAFTKDKLKLMTKRMASCTIDMIDDWKNRARIADHQNIT IEMSEEFKRLTCDVITHTAFGSNYVEGGEVFKAQDELIHHCVATMADLYIPGSRFLPTPSNRQMWKMENNVNNSLRRLIQGRLESAQARGNLDGCYGDDV LGLLVEASKTTNKSLKLTMDEIIDECKQFFFSGHETTAKLLTWTVFLLSLHQEWQERLREEVLTECGMGIPDADMVSKLKLLNMVLLETLRLYCPVLETL RETSRATKLGDFLIPKGVFITIQLVQLHRSKEYWGEDANDFNPLRFKNGVSQAAKHPNAFLGFGMGPRTCLGQNFAMLEVKLVLSLLLQRFSFFLSPEYK HAPANYLTMEAQYGVPTIVKPLLSK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G46950		CYP709B2	"cytochrome P450, family 709, ...		Potri.006G022200 [exp]	0	1	Pt-CYP709.2
					Potri.001G459001 [exp]	1.00	0.9910
AT5G01600		ATFER1	ARABIDOPSIS THALIANA FERRETIN ...		Potri.006G103900 [exp]	3.46	0.9620
AT1G37140		MCT1	MEI2 C-terminal RRM only like ...		Potri.002G088200 [exp]	5.47	0.9711
AT3G18010	HD	WOX1	WUSCHEL related homeobox 1 (.1...		Potri.010G111400 [exp]	5.74	0.9620
AT5G06860		ATPGIP1, PGIP1	polygalacturonase inhibiting p...		Potri.016G049600 [exp]	5.83	0.9319	PGIP.2
AT1G23420	YABBY	INO, YAB4	INNER NO OUTER, Plant-specific...		Potri.010G042400 [exp]	5.91	0.9895	Pt-INO.2
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Potri.006G103850 [exp]	6.00	0.9295
AT5G67060	bHLH	HEC1, bHLH088	HECATE 1, basic helix-loop-hel...		Potri.007G044600 [exp]	6.24	0.9611
AT1G04645			Plant self-incompatibility pro...		Potri.018G148366 [exp]	7.48	0.9819
					Potri.004G022300 [exp]	7.74	0.9507

Compare expression of checked genes

Potri.006G022200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.