Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	GT4.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G53150 617 / 0 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G36800 547 / 0 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36780 544 / 0 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 537 / 0 UDP-Glycosyltransferase superfamily protein (.1) AT2G36750 535 / 0 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36790 527 / 0 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT2G36760 525 / 0 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT3G53160 484 / 2e-168 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G15480 404 / 8e-137 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G15490 401 / 6e-136 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G097400 [exp] 870 / 0 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.012G048700 [exp] 538 / 0 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.001G303000 [exp] 436 / 8e-150 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G302400 [exp] 436 / 1e-149 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303600 [exp] 432 / 2e-148 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G099032 [exp] 432 / 4e-148 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098966 [exp] 428 / 1e-146 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 423 / 1e-144 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G098400 [exp] 423 / 2e-144 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014401 [exp] 624 / 0 AT3G53150 537 / 0.0 UDP-glucosyl transferase 73D1 (.1) Lus10014437 [exp] 486 / 5e-169 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10014402 [exp] 485 / 8e-169 AT2G36780 474 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10027739 [exp] 472 / 8e-164 AT2G36780 453 / 2e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10023893 [exp] 468 / 5e-162 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10016268 [exp] 465 / 1e-160 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 464 / 2e-160 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10014403 [exp] 456 / 2e-157 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10014404 [exp] 456 / 5e-157 AT2G36760 507 / 4e-177 UDP-glucosyl transferase 73C2 (.1) Lus10023894 [exp] 456 / 7e-157 AT2G36780 516 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.006G120600.1 pacid=42769954 polypeptide=Potri.006G120600.1.p locus=Potri.006G120600 ID=Potri.006G120600.1.v4.1 annot-version=v4.1 ATGTCTAGTCAACTGCACTTTGTGTTGATCCCGCTTATGGCACAGGGACACATGATCCCCATGATAGACATGGCCAGGCTCATTTCAGAGCGTGGTGTGA CTGTAAGTTTGGTCACTACCCCTCACAATGCATCAAGATTTGCGTCAATAATCGAAAGAGCAAGAGAGTCTAGTCTCCCTATTCGGCTTGTGCAGATACC GTTTCCATGCGAAGAAGTGGGACTCCCTATCGGCTACGAGAATCTTGACACCTTACCTTCAAGAGACCTACTGAAGAGATTCTATATTGCAGTTGCTAGG CTGCAGCAGCCATTAGAACGCATACTTGAACATGCCAAGCCTCGTCCAAGCTGCATAATATCAGACAAGTGCTTATCCTGGACAGCCAAAACCGCTCAAC GTTTCAACATCCCACGGATTGTTTTTCATGGCATGTGCTGCTTTTCTTTGTTGAGTTCTAATAATATAAGGCTTCACAAAGCTCACCTTACTGTAAATTC GGATTCAGAACCTTTTGTGGTGCCAGGGATGCCAAAAAGTTTTGAGATAACAAAGGCTCAGCTACCGGGAGCATTCGTAAGCTTACCTGATTTGGATGAC GTCCGTAACGAGATGCAAGAGGCTGAATCTACAGCTTATGGGGTTGTGGTTAATAGTTTTGACGAGTTGGAGCATGGTTGTGCTGAGGAGTACGGAAAGG CTCTAAAGAAGAAAGTATGGTGCGTTGGACCAGTTTCTCTATGTAACAAGCAGAATTTAGATAAGTTTGAGAGAGGAAACAAAGCTTCAATTGGCAAGAC ACAATGCTTGGAGTGGCTTGACTCTATGGAGCCAGGGTCTGTTATTTACGCTTGCCTCGGTAGCCTATGTCGCCTAGTGCCATCGCAGTTGATAGAACTA GGTTTGGGTTTGGAAGCATCAAATAAACCCTTTATCTGGGTAGTGAAAACTGGAGAGAGAGGTTCTGAATTAGAGGAATGGTTCGTGAAGGAGAGGTTTG AAGAAAGGATCAAAGGAAGGGGGCTTCTGATCAAAGGCTGGGCTCCTCAAGTCCTTATTTTGTCCCATAGAGCAGTTGGAGGATTCTTAACTCATTGTGG TTGGAACTCTACAGTTGAAGGGATCTGCTCTGGCGTGCCAATGATATCATGGCCTCAGTTTTCCGAGCAATTCTTTAATGAGAAGCTAGTCGTTGAGATT TTAAGGATCGGTGTGCGAATCGGCGTTGAGGTTCCAGTGAGATGGGGAGAAGAAGAGAAAGTTGGAGTGTTAGTGAAGAAAGACGAAGTCAGGAAGGCAG TAATTACGTTGATGGATGCAGGCGGAGAAGAAGGCAAGAACAGAAGGAGGAGAGCAATTGAACTTGGAAAGACGGCAAGGAAGTCTATGGAATTGGGTGG ATCTTCCAACCTTAACCTGTCATTCTTAATCCAAGATATCATGAAACTACAAAACTCAAAACAAGTCTAA
AA sequence Show only first row Show all	>Potri.006G120600.1 pacid=42769954 polypeptide=Potri.006G120600.1.p locus=Potri.006G120600 ID=Potri.006G120600.1.v4.1 annot-version=v4.1 MSSQLHFVLIPLMAQGHMIPMIDMARLISERGVTVSLVTTPHNASRFASIIERARESSLPIRLVQIPFPCEEVGLPIGYENLDTLPSRDLLKRFYIAVAR LQQPLERILEHAKPRPSCIISDKCLSWTAKTAQRFNIPRIVFHGMCCFSLLSSNNIRLHKAHLTVNSDSEPFVVPGMPKSFEITKAQLPGAFVSLPDLDD VRNEMQEAESTAYGVVVNSFDELEHGCAEEYGKALKKKVWCVGPVSLCNKQNLDKFERGNKASIGKTQCLEWLDSMEPGSVIYACLGSLCRLVPSQLIEL GLGLEASNKPFIWVVKTGERGSELEEWFVKERFEERIKGRGLLIKGWAPQVLILSHRAVGGFLTHCGWNSTVEGICSGVPMISWPQFSEQFFNEKLVVEI LRIGVRIGVEVPVRWGEEEKVGVLVKKDEVRKAVITLMDAGGEEGKNRRRRAIELGKTARKSMELGGSSNLNLSFLIQDIMKLQNSKQV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G53150		UGT73D1	UDP-glucosyl transferase 73D1 ...		Potri.006G120600 [exp]	0	1	GT4.2
AT1G21550			Calcium-binding EF-hand family...		Potri.005G183300 [exp]	1.73	0.9742
AT4G37290			unknown protein		Potri.007G049500 [exp]	3.00	0.9625
					Potri.008G019250 [exp]	3.46	0.9713
AT5G14930		GENE101, SAG101	senescence-associated gene 101...		Potri.019G007227 [exp]	4.00	0.9597
AT5G65380			MATE efflux family protein (.1...		Potri.002G102100 [exp]	4.24	0.9362
					Potri.004G056374 [exp]	8.00	0.9131
					Potri.019G017304 [exp]	10.09	0.9465
AT4G37290			unknown protein		Potri.005G142900 [exp]	10.48	0.9500
AT3G55290			NAD(P)-binding Rossmann-fold s...		Potri.016G035200 [exp]	10.72	0.9000
AT4G37980		ELI3-1, ATCAD7	CINNAMYL-ALCOHOL DEHYDROGENASE...		Potri.001G268600 [exp]	10.90	0.9442	CADL9,CAD.6

Compare expression of checked genes

Potri.006G120600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.