Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G03370 108 / 2e-31 acylphosphatase family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G093000 [exp] 132 / 3e-40 AT5G03370 116 / 9e-33 acylphosphatase family (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026533 [exp] 112 / 9e-33 AT5G03370 141 / 6e-43 acylphosphatase family (.1) Lus10013820 [exp] 111 / 2e-32 AT5G03370 135 / 1e-40 acylphosphatase family (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0622 [poplar] [flax] Acylphosphatase PF00708 [poplar] [flax] Acylphosphatase Acylphosphatase
Representative CDS sequence Show only first row Show all	>Potri.006G124966.1 pacid=42768638 polypeptide=Potri.006G124966.1.p locus=Potri.006G124966 ID=Potri.006G124966.1.v4.1 annot-version=v4.1 ATGACTATGGCCATTACTAATCATTCCTCACCTCCTCAATCACCCTCTACGAAAACGGTGAGGTTGGAGTATGCAACCCAATTGGGGTTAAAAGGTTGGT TGAGGAACAGAAGGGATGGTTCTGTGGAGGCTCTATTCTCTGGTGATTCTGATAATGTACAGGAAATGGAGCAGAGGTGCCGCCGTGGCCCACCTGATGC TATGGTTACTGGCTTCCAGGTTTTCCCTTCCACTGATGACCCCGGAACTGGATTTCAGCGCAAAGCAACAGTTTGA
AA sequence Show only first row Show all	>Potri.006G124966.1 pacid=42768638 polypeptide=Potri.006G124966.1.p locus=Potri.006G124966 ID=Potri.006G124966.1.v4.1 annot-version=v4.1 MTMAITNHSSPPQSPSTKTVRLEYATQLGLKGWLRNRRDGSVEALFSGDSDNVQEMEQRCRRGPPDAMVTGFQVFPSTDDPGTGFQRKATV

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G03370			acylphosphatase family (.1)		Potri.006G124966 [exp]	0	1
AT3G15510	NAC	ATNAC2, ANAC056...	NAC-REGULATED SEED MORPHOLOGY ...		Potri.001G404400 [exp]	6.16	0.8826	Pt-ATNAC2.2
AT4G03000			RING/U-box superfamily protein...		Potri.008G198300 [exp]	6.24	0.8249
AT4G35160			O-methyltransferase family pro...		Potri.019G102900 [exp]	7.34	0.8694	COMTL3,Pt-GSI.2
AT5G18980			ARM repeat superfamily protein...		Potri.010G029300 [exp]	9.59	0.8614
AT3G25280			Major facilitator superfamily ...		Potri.002G249100 [exp]	10.95	0.8431
AT5G51670			Protein of unknown function (D...		Potri.015G131800 [exp]	11.66	0.8190
AT2G27990	HD	PNF, BLH8	POUND-FOOLISH, BEL1-like homeo...		Potri.009G009800 [exp]	12.64	0.8160
AT1G68470			Exostosin family protein (.1)		Potri.001G381900 [exp]	13.74	0.8481
AT3G54140		ATPTR1	ARABIDOPSIS THALIANA PEPTIDE T...		Potri.016G111800 [exp]	15.96	0.8199
AT1G08990		PGSIP5	plant glycogenin-like starch i...		Potri.005G033500 [exp]	16.70	0.8377

Compare expression of checked genes

Potri.006G124966 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.