Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G45290 506 / 5e-176 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G39200 486 / 2e-167 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 476 / 4e-163 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G11310 471 / 1e-161 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G33670 385 / 5e-129 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT2G17480 385 / 9e-128 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G17430 379 / 6e-126 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT5G65970 377 / 5e-125 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT1G42560 370 / 2e-123 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G44110 337 / 3e-110 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G002500 [exp] 523 / 0 AT3G45290 551 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.010G220500 [exp] 480 / 8e-165 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 478 / 4e-164 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.009G011900 [exp] 473 / 6e-162 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 468 / 2e-160 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.004G050000 [exp] 412 / 7e-140 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 414 / 5e-139 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.016G088000 [exp] 408 / 5e-138 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G099200 [exp] 408 / 8e-137 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036121 [exp] 518 / 5e-180 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 466 / 5e-159 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 464 / 2e-158 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 461 / 3e-157 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10023506 [exp] 461 / 3e-156 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 412 / 1e-137 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 392 / 8e-130 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 378 / 4e-126 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 372 / 4e-123 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 358 / 2e-117 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [poplar] [flax] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Potri.006G129700.1 pacid=42769069 polypeptide=Potri.006G129700.1.p locus=Potri.006G129700 ID=Potri.006G129700.1.v4.1 annot-version=v4.1 ATGGCTACAGAAGATACTTCAATTCGCACGCTTGAACACACACCATCATGGGCACTCGCCACAGTTTGTTTTGTTATCATATCCGTTTCAATTGTCCTGG AGCACATTTTTCATCTCCTCACAAACTGGCTTAACAGAAGTCGAAGAACTGCTTTGGGCGAGGCAGCGGACAAGCTCAAATCAGAGTTGATGTTGTTAGG ATTCATGTCATTGATGCTGGCGGCGACCCAAAAACCAATTTCTAAAATCTGCATACCAGCCAATCTTGCGAACTCCATGCTTCCTTGTCGTAAAGAGGTT GCAATATCCAAACTCACTGCAGTACAAAATTATGGAAACTTTGCCGGTAGTTTTGTTGGGAGTTTGTCTTCAGAGAATGGTCTGCGTGGTAAGAATATTT TATGGGGGCATAGGAGTTTGTTAGCAGATGACGGTGTAAATATTTCTGATGATCCTTGCAGTTCAAAAGGAAAGGTTTCTTTAATATCAGAAAAAGGGAT CCATCAGCTTCACATATTCATTTTTGTGCTAGCAGTTATGCAAATTGTATATAGTGTTCTAACCATGGCTCTGGGCTGGACCAAGATGAGGCGGTGGGAA GCTTGGGAGAAAGAAAGTCGGACAATTGAATACCAAGTTGCAAATGATCCAAATCGATTTAGACTCACAAGACAAACAACATTCGGAAGACGGCATATAG AGACTTGGACAAACATGTCAGCTCTTCTATGGATGATATGTTTCTTCAGACAGTTTTTTCATTCGGTAGCAAAAGTTGATTATCTCACCTTGAGACATGG TTTTATCTCGGCACACTTGTCAACCAGGAACGTCAACCATTTCAATTTCCAAGAATACATACAGCGATCCTTAGACGACGATTTCAAGGTCATTGTTAGC ATCAGTCCTTTTATGTGGTTTTTGGTGGCAATTTTCTTGCTGCTGGACGTACGTGGTTGGAATGTATACCACTGGATTTCCTATGTTCCACTCGTGATTG TGCTGGTCCTGGGAGCCAAACTTGAGGTGATTGTTGCAAAAATGGCTTTCCGAATCGATGATCAAAACTGTGTGAGCAGAGGAACCCCTCTTGTTCATCC AAATGATAATCTCTTTTGGTTCGGTCAACCAAGATTTGTTCTTGTTCTTATCCATTTTGTTCTGTTTGTGAATGCATTTGAGTTTGCCTTCTTCATTTGG GTTGCAATACAATTCGGGCTTGAATCATGTTACCATGAGAACACTTCATTTATTGTCGCAAGGGTCGTGTTAGCGATCACAGTTCAAGTCATATGCAGCT ACATTACCCTTCCGCTCTATGCACTTGTCACACAGATGGGGTCTCAATTCAAGAGTAAGGTACTAGAAGAGCAAGTGGCTAATATTATAAAGCAACGGCA TGCTGAAGCGAGGGAAAGAAGGAAGACGCAAGATCAATATTCTTTACGGTCTCCGCGTTCTGCTTTGTCTACTGATCGGAGCATCAAAATGTACAGTCCC ATCAGATCGCCAAGACCACCAATATTACATGAACTCACTCTGTCATCCAACGAACAACAGATTGCTGCAAAAGATAATGAAAAACGAAGCCGGCTCATCC ATTAA
AA sequence Show only first row Show all	>Potri.006G129700.1 pacid=42769069 polypeptide=Potri.006G129700.1.p locus=Potri.006G129700 ID=Potri.006G129700.1.v4.1 annot-version=v4.1 MATEDTSIRTLEHTPSWALATVCFVIISVSIVLEHIFHLLTNWLNRSRRTALGEAADKLKSELMLLGFMSLMLAATQKPISKICIPANLANSMLPCRKEV AISKLTAVQNYGNFAGSFVGSLSSENGLRGKNILWGHRSLLADDGVNISDDPCSSKGKVSLISEKGIHQLHIFIFVLAVMQIVYSVLTMALGWTKMRRWE AWEKESRTIEYQVANDPNRFRLTRQTTFGRRHIETWTNMSALLWMICFFRQFFHSVAKVDYLTLRHGFISAHLSTRNVNHFNFQEYIQRSLDDDFKVIVS ISPFMWFLVAIFLLLDVRGWNVYHWISYVPLVIVLVLGAKLEVIVAKMAFRIDDQNCVSRGTPLVHPNDNLFWFGQPRFVLVLIHFVLFVNAFEFAFFIW VAIQFGLESCYHENTSFIVARVVLAITVQVICSYITLPLYALVTQMGSQFKSKVLEEQVANIIKQRHAEARERRKTQDQYSLRSPRSALSTDRSIKMYSP IRSPRPPILHELTLSSNEQQIAAKDNEKRSRLIH

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G45290		ATMLO3, MLO3	MILDEW RESISTANCE LOCUS O 3, S...		Potri.006G129700 [exp]	0	1
AT1G21270		WAK2	wall-associated kinase 2 (.1)		Potri.009G154100 [exp]	1.00	0.9849
AT1G17840		AtABCG11, WBC11...	DESPERADO, CUTICULAR DEFECT AN...		Potri.005G073050 [exp]	1.41	0.9751
AT1G05200		GLUR3, ATGLR3.4	glutamate receptor 3.4 (.1.2)		Potri.002G230000 [exp]	1.73	0.9711	Pt-GLUR3.3
AT1G30860			RING/U-box superfamily protein...		Potri.001G074800 [exp]	2.44	0.9509
AT2G29100		ATGLR2.9	GLUTAMATE RECEPTOR 2.9, gluta...		Potri.004G052500 [exp]	2.82	0.9708
AT4G24010		CSLG2, ATCSLG1	ARABIDOPSIS THALIANA CELLULOSE...		Potri.003G142201 [exp]	4.47	0.9651
AT5G60900		RLK1	receptor-like protein kinase 1...		Potri.003G212000 [exp]	8.06	0.9385
AT2G38290		AMT2;1, ATAMT2	AMMONIUM TRANSPORTER 2;1, ammo...		Potri.019G000800 [exp]	9.48	0.9406
AT5G47240		ATNUDT8	nudix hydrolase homolog 8 (.1)		Potri.018G069100 [exp]	10.09	0.9363
AT4G25640		FFT, ATDTX35	FLOWER FLAVONOID TRANSPORTER, ...		Potri.015G147600 [exp]	11.48	0.9403

Compare expression of checked genes

Potri.006G129700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.