Potri.006G216900 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.006G216900.4 pacid=42768130 polypeptide=Potri.006G216900.4.p locus=Potri.006G216900 ID=Potri.006G216900.4.v4.1 annot-version=v4.1
ATGGCGGCGGGTGGTTTTGTTAGCCGCGCATTTGAATCGATGCTAAAGGAATGTTCGGGCAAGAAGTTCCCCGATCTCCAAAAGGCTATCCAATCTTATT
TAGATGATACAAAAGAGGTGACACAGCAGCCTAAACCCATTGAGACGAATCAGGCAGCATCGGCTGCTGGAGACGGGAGCTCACTTGATTCTGAGGGTGA
AGGTGCAAAAACTGGAACAGAATCAGATCAGTCAGAAACGGTTCAACATACTTCTGAAGAGGCACAGCAGGCGAGTAAGCAAGCAGGCATTAGTCGAAGC
ATTACAGTTGTACTGGCAAATGCTGGGTGCACCTTGGAAGGAGCTGAAGCGGAGCTTGTTTTAAATCCACTACGTTTTGCATTTGAGACGAAGAATTTGA
AAATCTTAGAACCTGCTTTGGATTGTCTTCATAAACTCATTGCATATGATCATTTAGAGGGAGATCCTGGTTTGGAAGGTGGTAAAAATGTTCCGCTGTT
TACGGACATTCTGAACATGGCTTGCAATTGTATTGATAATTCATCACCTGATAGTACGATTCTTCAAGTGTTAAAGGTACTTCTGACAGCTGTGGCATCC
ACAAAGTTTAGAGTACATGGGGAGCCTTTGTTGGGAGTCATCAGAATATGTTACAACATTGCTTTGCACAGCAAGAGCCCTATAAATCAAGCAACATCGA
AGGCAATGTTAACACAGATGATCAACATCATTTTCAGGAGAATGGAATCTGATTCTCAAGCTCAGGCTTCTACTTCAACTGGTTCTACTGGGAATGATGA
AGCTGCTTTGGCAGAGAAATCAGATTTAAGCACTGAAGAAACTCCAAATGCTGACCAAAACGAGGAAGAAATGACTTTGGGGGATGCACTTAATCAGATC
AAAGAAACTTCTCTTGCATCTGTTGAGGAACTCCATAATCTTGCAGGCGGTTCTGATATCAAGGGTCTGGAGGCTGTTCTTGACAAAGCTGTGCATACTG
AAGATGGTAAAAAGATTACAAGAGGGATTGACCTGGAGAGCATGGACATTGGACAACGGGATGCTTTATTGGTATTCCGCACCCTTTGTAAGATGGGCAT
GAAGGAGGATAATGATGAAGTCACCACCAAAACAAGGATTTTGTCTCTAGAGCTTCTGCAGGGTTTATTGGAAGGTGTTAGCCATTCATTTACAAAGAAC
TTCCATTTTATTGACTCAGTAAAAGCATATCTTTCCTATGCTCTGTTGCGTGCTTCAGTGTCACAATCTTCAATCATATTTCAGTATGCAACTGGAATCT
TCTTTGTGCTTTTGTTGCGGTTCAGGGAAAGTCTTAAAGGTGAAGTTGGTGTATTCTTTCCCTTGATAGTTCTACGATCATTGGATGGTGCAGAGTGTCC
TGCTAACCAAAAAATGAGTGTTCTTCGGATGCTTGAAAAAGTTTGTAAGGATCCTCAAATGCTTGTTGATGTATATGTGAATTATGACTGTGATCTCGAG
GCACCAAACCTGTTTGAACGCATGGTTACAACCCTATCTAAAATATCTCAAGGGGCTCAAGTTGCAGATCCAAATTCTGCTGCTGTGTCGCAGACTACCT
CAATTAAAGGTTCATCACTTCAGTGTCTTGTGAATGTACTTAAATCCCTGCTTGATTGGGAGAGATCATGTAGAGAATTGGAAAAGAAAAGTAAAAACAC
CCAATCTCTTGAAGAAGAGGTTTCAGCTAGAGAAATTGCAGAGGTAAAAGGCAGGGAAGATGTGCCCAATAACTTTGAGAAGGCAAAGGCTCATAAATCT
ACAATGGAAGCTGCTATCTCAGAGTTCAATAGGCATTCAGTTAAGGGCTTAGAGTATATGATATCAAACAAGTTGGTGGAAAATAATCCTGCTTCAGTTG
CTCAATTTCTGAGAAATACTCCTAGTTTGAACAAGGCCATGATTGGTGATTATTTGGGCCAACACGAAGAGTTTCCCCTTGCTGTCATGCATGCTTATGT
AGATTCGATGAAGTTTTCAGAAATGAAGTTTGATACAGCAATTCGCGAGTTCCTGAAAGGATTTCGACTTCCAGGGGAAGCTCAAAAGATAGATCGTATC
ATGGAAAAGTTTGCAGAGAGATATTGTGCAGACAATCCAGGTCTTTTCAAAAATGCTGATACCGCATATGTTCTTGCATATGCGGTTATACTGTTGAACA
CTGATGCACATAATCCAATGGTGTGGCCAAAAATGTCTAAGTCAGATTTTATACGTATGAATGCCATGAGTGATGCTGAAGATTGTGCCCCAACAGATCT
ACTGGAAGAGATATATGATTCGATTGTCAAGGACGAGATAAAACTGAAAGATGATGCAGCTGGGATTGGGAAAAACAGCAAACAAAAGCCAGAAGGTGAA
GAGAGAGGCGGCCTTGTCAGTATTCTTAATCTTGCTCTTCCCAAACGAAAGTCATCAACTGATGCCAAGTCAGAGAATGAAGCTATAATTAAGCAAACAC
AGGCAATATTCCGGAAACAAGGAGCTAGAAGAGGAGTTTTCCATACGGTACAACAGATTGAAATTATAAGGCCCATGGTTGAAGCTGTAGGATGGCCTTT
GCTTGTTACTTTCTCTGTCACTATGGAGGAAGGTGATAACAAGCCAAGGGTTGTTCTCTGCATGGAGGGATTTAAAGCTGGAATCCACATTACACATGTT
CTGGGAATGGATACCATGCGTTATGCTTTTTTAACATCTCTGGTCCGATTTACTTTCTTGCATGCCCCGAAGGAGATGCGTAGTAAAAATGTAGAAGCTT
TGAGGACTCTGCTTGCACTATGTGACTCAGAAACGGATTCCCTTCAAGACACATGGAATGCAGTCTTAGAATGTGTTTCTCGGCTTGAATACATCACTTC
AACTCCTTCTATTGCAGTAACTGTCATGCTTGGATCAAATCAAATTTCCAGGGATGCTGTTCTTCAATCCTTAAGAGAATTGGCTGGGAAACCTGCTGAA
CAAGTTTTTGTCAATAGTGTTAAATTACCCAGTGATTCGGTTGTAGAGTTCTTCAATGCTCTATGTGGTGTTTCAGCAGAAGAACTAAGACAGACTCCTG
CTCGTGTATTTAGTTTGCAAAAGCTTGTTGAGATCAGCTATTACAATATGGCTCGTATACGCATGGTCTGGGCTAGAATTTGGTCTGTCTTGGCAAATCA
CTTTATCTCTGCCGGGAGTCATCATGATGAGAAAATTGCCATGTATGCCATAGATTCTCTAAGGCAGCTTGGAATGAAGTATTTGGAGCGTGCTGAACTT
GCTAATTTCACTTTCCAGAATGACATTCTTAAACCCTTTGTTGTTCTTATGCGGAATAGTAGAAGTCAATCCATAAGGAGGCTAATTGTTGATTGCATTG
TTCAAATGATCAAATCTAAAGTTGGAAACATTAAGTCTGGATGGCGCAGTGTTTTTATGATTTTCACTGCTGCTGCTGATGATGAGATGGAATCAATTGT
TGAAAGTGCATTTGAAAATGTTGAGCAGGTTATCTTGGAACACTTTGATCAGGTTGTTGGAGATTGTTTCATGGACTGTGTAAACTGTCTTATAAGATTT
GCCAACAATAAAACTTCTCACCGTATAAGTTTGAAGGCTATTGCACTTCTCCGCATATGCGAGGACCGTCTTGCAGAGGGCCTTATACCTGGTGGTGCTT
TGAAGCCTATTGATGTTTCTGTTGATGCAAACTTTGATGTGACTGAACATTATTGGTTCCCGATGCTAGCTGGTTTATCTGATTTGACATCAGATCTAAG
ACCTGAGGTCAGAAGCTGTGCACTCGAAGTTTTGTTTGATTTGCTAAATGAGAGAGGTAGCAAGTTCTCATCATCATTTTGGGAGAGCATATTCCATCGT
GTCTTGTTCCCCATTTTTGATCATGTTAGACATGCTGGAAAGGAAAGCTTAATCTCTTCTGATGATGAACTGTTTCGAGAAACCAGCATTCATTCGCTTC
AGTTGCTGTGCAATCTCTTTAACACTTTCTATAAGGAAGTGTGTTTCATGCTGCCACCACTTCTGGGTTTGCTTTTAGACTGCGCAAAAAAGACTGATCA
GACGGTGGTTTCCATCTCTCTTGGTGCATTAGTACATCTTATAGAAGTTGGAGGCCACCAGTTCAGCGAGAGTGACTGGGATACTTTGTTGAAAAGCATA
AGAGATGCTTCATACACAACACAACCACTTGAGCTGCTCAATGCTTTGGGTTTTGAAGGTTCTATGGTGCTAGTTACAGATTCAGAGGTTGGCACAGATA
ACCATCAGATTGATGCCAGTGATAATGGACATGTATCTCCACTGCCATCGCCAAGTATCAGTGCTCATGGCACTAGAGGGAATCCTAATGCAATGGTCTT
ACTGGATCACAACCAAGAATTTGGACTGCAAAGTAATTTGGAAGGGTCAGAAGGCCTACCATCGCCTTCAGGAAGATCCCAGAAACCTGCTGAAGATCTT
CAAAGGAATCAAACTATAGGTCAAAAGATCATGGGAAACATGATGGACAATCTGTTTATCAGAAGTTTTACCTCCAAATCCAAGGCTCGTGTTTCTGATG
CCTCAGCACCATCTTCTCCTATCAAGATTCCAGATGCTGTGGAGTCTGATGCCAAAGAGGTGGAAAGTCCACTTATGGCAACTGTTAGGGGCAAGTGCAT
CACTCAATTATTACTTCTTGGTGCCATTGATAGTATTCAGAAGAAGTATTGGAGCAAATTGAAAGCTTCTCAAAAGATTGCTATAATGGATGTTTTATTG
TCCATGTTAGAGTTTGCGGCTTCATATAATTCATATTCGAATCTCAGAATGCGTATGCACCATATTCCTGTTGAGAGGCCTCCTCTAAATCTTCTTCGGC
AAGAATTAGCTGGAACTAGCATTTATCTAGATGTGTTGCAGAAAACAACTTCAGGTTTTGATGCCATCAACGAGAAACAGCAGGAATCTAATGTTGATGT
TGCTCGAGTTCACAATGATTCAAGCTTTGCTGGGCATTCTAGTGGGGAAGAGAAACTTGAAGGAGTTGCAGAAGAGAAACTCGTTTCTTTCTGTGAACAG
GTACTAAGGGAAGCGTCCGACCTTCAATCCAGTGTAGGAGAGACTACTAACATGAATGTTCACCGAGTCCTTGAGTTGCGTTCCCCAGTCATTGTTAAGG
TGCTCAAGGGCATGTGCTTTATGAACAACAAGATTTTCAGAAGACACCTGAGAGAGTTCTATCCCTTGCTTACAAAACTTGTGTGCTGTGATCAGATGGA
TGTTCGCGGGGCACTCGGTGATCTTTTCAGGGTGCAGCTGAAAGCTTTACTGCCATAG
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AA sequence
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>Potri.006G216900.4 pacid=42768130 polypeptide=Potri.006G216900.4.p locus=Potri.006G216900 ID=Potri.006G216900.4.v4.1 annot-version=v4.1
MAAGGFVSRAFESMLKECSGKKFPDLQKAIQSYLDDTKEVTQQPKPIETNQAASAAGDGSSLDSEGEGAKTGTESDQSETVQHTSEEAQQASKQAGISRS
ITVVLANAGCTLEGAEAELVLNPLRFAFETKNLKILEPALDCLHKLIAYDHLEGDPGLEGGKNVPLFTDILNMACNCIDNSSPDSTILQVLKVLLTAVAS
TKFRVHGEPLLGVIRICYNIALHSKSPINQATSKAMLTQMINIIFRRMESDSQAQASTSTGSTGNDEAALAEKSDLSTEETPNADQNEEEMTLGDALNQI
KETSLASVEELHNLAGGSDIKGLEAVLDKAVHTEDGKKITRGIDLESMDIGQRDALLVFRTLCKMGMKEDNDEVTTKTRILSLELLQGLLEGVSHSFTKN
FHFIDSVKAYLSYALLRASVSQSSIIFQYATGIFFVLLLRFRESLKGEVGVFFPLIVLRSLDGAECPANQKMSVLRMLEKVCKDPQMLVDVYVNYDCDLE
APNLFERMVTTLSKISQGAQVADPNSAAVSQTTSIKGSSLQCLVNVLKSLLDWERSCRELEKKSKNTQSLEEEVSAREIAEVKGREDVPNNFEKAKAHKS
TMEAAISEFNRHSVKGLEYMISNKLVENNPASVAQFLRNTPSLNKAMIGDYLGQHEEFPLAVMHAYVDSMKFSEMKFDTAIREFLKGFRLPGEAQKIDRI
MEKFAERYCADNPGLFKNADTAYVLAYAVILLNTDAHNPMVWPKMSKSDFIRMNAMSDAEDCAPTDLLEEIYDSIVKDEIKLKDDAAGIGKNSKQKPEGE
ERGGLVSILNLALPKRKSSTDAKSENEAIIKQTQAIFRKQGARRGVFHTVQQIEIIRPMVEAVGWPLLVTFSVTMEEGDNKPRVVLCMEGFKAGIHITHV
LGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETDSLQDTWNAVLECVSRLEYITSTPSIAVTVMLGSNQISRDAVLQSLRELAGKPAE
QVFVNSVKLPSDSVVEFFNALCGVSAEELRQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDSLRQLGMKYLERAEL
ANFTFQNDILKPFVVLMRNSRSQSIRRLIVDCIVQMIKSKVGNIKSGWRSVFMIFTAAADDEMESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRF
ANNKTSHRISLKAIALLRICEDRLAEGLIPGGALKPIDVSVDANFDVTEHYWFPMLAGLSDLTSDLRPEVRSCALEVLFDLLNERGSKFSSSFWESIFHR
VLFPIFDHVRHAGKESLISSDDELFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLGLLLDCAKKTDQTVVSISLGALVHLIEVGGHQFSESDWDTLLKSI
RDASYTTQPLELLNALGFEGSMVLVTDSEVGTDNHQIDASDNGHVSPLPSPSISAHGTRGNPNAMVLLDHNQEFGLQSNLEGSEGLPSPSGRSQKPAEDL
QRNQTIGQKIMGNMMDNLFIRSFTSKSKARVSDASAPSSPIKIPDAVESDAKEVESPLMATVRGKCITQLLLLGAIDSIQKKYWSKLKASQKIAIMDVLL
SMLEFAASYNSYSNLRMRMHHIPVERPPLNLLRQELAGTSIYLDVLQKTTSGFDAINEKQQESNVDVARVHNDSSFAGHSSGEEKLEGVAEEKLVSFCEQ
VLREASDLQSSVGETTNMNVHRVLELRSPVIVKVLKGMCFMNNKIFRRHLREFYPLLTKLVCCDQMDVRGALGDLFRVQLKALLP
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.006G216900 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.