Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP711.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G26170 723 / 0 CYP711A1, MAX1 MORE AXILLARY BRANCHES 1, "cytochrome P450, family 711, subfamily A, polypeptide 1", cytochrome P450, family 711, subfamily A, polypeptide 1 (.1.2) AT5G25140 145 / 9e-38 CYP71B13 "cytochrome P450, family 71, subfamily B, polypeptide 13", cytochrome P450, family 71, subfamily B, polypeptide 13 (.1) AT5G57260 140 / 4e-36 CYP71B10 "cytochrome P450, family 71, subfamily B, polypeptide 10", cytochrome P450, family 71, subfamily B, polypeptide 10 (.1) AT3G26300 139 / 1e-35 CYP71B34 "cytochrome P450, family 71, subfamily B, polypeptide 34", cytochrome P450, family 71, subfamily B, polypeptide 34 (.1) AT3G26310 137 / 5e-35 CYP71B35 "cytochrome P450, family 71, subfamily B, polypeptide 35", cytochrome P450, family 71, subfamily B, polypeptide 35 (.1) AT5G25180 129 / 4e-32 CYP71B14 "cytochrome P450, family 71, subfamily B, polypeptide 14", cytochrome P450, family 71, subfamily B, polypeptide 14 (.1) AT2G45560 129 / 5e-32 CYP76C1 "cytochrome P450, family 76, subfamily C, polypeptide 1", cytochrome P450, family 76, subfamily C, polypeptide 1 (.1.2) AT3G26330 127 / 2e-31 CYP71B37 "cytochrome P450, family 71, subfamily B, polypeptide 37", cytochrome P450, family 71, subfamily B, polypeptide 37 (.1) AT5G25120 127 / 2e-31 CYP71B11 "ytochrome p450, family 71, subfamily B, polypeptide 11", ytochrome p450, family 71, subfamily B, polypeptide 11 (.1) AT3G26290 127 / 3e-31 CYP71B26 "cytochrome P450, family 71, subfamily B, polypeptide 26", cytochrome P450, family 71, subfamily B, polypeptide 26 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G062100 [exp] 961 / 0 AT2G26170 726 / 0.0 MORE AXILLARY BRANCHES 1, "cytochrome P450, family 711, subfamily A, polypeptide 1", cytochrome P450, family 711, subfamily A, polypeptide 1 (.1.2) Potri.005G037100 [exp] 134 / 1e-33 AT5G06900 383 / 4e-128 "cytochrome P450, family 93, subfamily D, polypeptide 1", cytochrome P450, family 93, subfamily D, polypeptide 1 (.1) Potri.005G037201 [exp] 134 / 1e-33 AT5G06900 382 / 6e-128 "cytochrome P450, family 93, subfamily D, polypeptide 1", cytochrome P450, family 93, subfamily D, polypeptide 1 (.1) Potri.019G071200 [exp] 133 / 2e-33 AT2G26710 346 / 9e-114 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.019G014407 [exp] 128 / 1e-31 AT2G26710 389 / 3e-130 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.014G020500 [exp] 127 / 2e-31 AT4G37370 462 / 2e-159 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G114400 [exp] 127 / 2e-31 AT4G12320 495 / 1e-171 "cytochrome P450, family 706, subfamily A, polypeptide 6", cytochrome P450, family 706, subfamily A, polypeptide 6 (.1) Potri.014G020432 [exp] 126 / 5e-31 AT4G37370 440 / 4e-151 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.010G139400 [exp] 125 / 2e-30 AT2G26710 402 / 2e-135 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008098 [exp] 803 / 0 AT2G26170 726 / 0.0 MORE AXILLARY BRANCHES 1, "cytochrome P450, family 711, subfamily A, polypeptide 1", cytochrome P450, family 711, subfamily A, polypeptide 1 (.1.2) Lus10013133 [exp] 802 / 0 AT2G26170 731 / 0.0 MORE AXILLARY BRANCHES 1, "cytochrome P450, family 711, subfamily A, polypeptide 1", cytochrome P450, family 711, subfamily A, polypeptide 1 (.1.2) Lus10026085 [exp] 145 / 2e-37 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10026084 [exp] 140 / 9e-36 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10017775 [exp] 140 / 2e-35 AT3G14630 359 / 2e-117 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) Lus10017961 [exp] 135 / 4e-34 AT3G48280 502 / 4e-175 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Lus10035502 [exp] 134 / 9e-34 AT5G06900 533 / 0.0 "cytochrome P450, family 93, subfamily D, polypeptide 1", cytochrome P450, family 93, subfamily D, polypeptide 1 (.1) Lus10032026 [exp] 130 / 3e-32 AT4G12300 464 / 1e-159 "cytochrome P450, family 706, subfamily A, polypeptide 4", cytochrome P450, family 706, subfamily A, polypeptide 4 (.1) Lus10042815 [exp] 129 / 6e-32 AT1G13110 396 / 3e-133 "cytochrome P450, family 71 subfamily B, polypeptide 7", cytochrome P450, family 71 subfamily B, polypeptide 7 (.1) Lus10005878 [exp] 127 / 2e-31 AT5G06900 440 / 1e-150 "cytochrome P450, family 93, subfamily D, polypeptide 1", cytochrome P450, family 93, subfamily D, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.006G226700.2 pacid=42769152 polypeptide=Potri.006G226700.2.p locus=Potri.006G226700 ID=Potri.006G226700.2.v4.1 annot-version=v4.1 ATGGATTTACAGGTCTTGTTTACAGATGTACCTGTGGTCACAGCTATTATTTGCACAGTGTTCGCCATGCTATTGGGATTATTGGGTTACTTGTATGGAC CCTACTGGGGTGTTAGGAAGGTGCCAGGCCCTCCAGTGATCCCCTTGTTGGGTCACCTTCCCTTGATGGCGAAGCATGGCCCTGATGTGTTTTCAGTTCT TGCAAAACGTTATGGCCCCATTTTCAGGTTTCATATGGGGAGACAACCACTGATCATAGTTGCTGACCCAGAGCTTTGTAAAGAAGTTGCGATAAAGAAG TTCAAAGACATTCCAAATAGAAGTGTTCCCTCTCCCATCTCAGCTTCTCCTCTTCATCAGAAAGGTCTCTTCTTCACCAGGGATGCAAGATGGTCAACCA TGAGAAACACAATACTTTCAGTCTACCAGCCATCACACTTAGCCAGCTTAGTGCCCACCATGCAATCATTCATTGAGTCTGCAACCGATAATTTTCAGTC TTCTAATGAAGAAATCACCTTCTCCAACTTCTCCCTCAAATTGGCCACGGATGTGATAGGACAAGCTGCTTTTGGTGTTGATTTTGGCCTCTCTAAACCA CAATCAGCCAGTGATTCAATCAACAGTTTCCATAACCAAGGCAAAGACAACTGTGATGTGTCAGAGTTCATTAATCAACATATCTACTCAACAACACAAC TTAAGATGGACTTGTCAGGTTCCTTTTCAATTATAATAGGTCTACTTGTCCCCATACTGCAGGAGCCATTTAGGCAGATCCTTAAACGAATTCCTGGCAC CATGGACTGGAAAGTTGATAGGACTAATAGGAATATAAGCGGCCGGCTTGATGAGATTGTCAGAAAGAAAATGGAAGAGAAAAATAGGGGTTCAAAGGAC TTCTTGTCACTAATATTACGTGCAAGGGAATCAGAGACTCTGTCAAAGAAAGTTTTTACTCCAGATTATATTAGTGCAGTTACTTATGAGCATCTTCTTG CTGGATCTATTACAACATCCTTTACATTATCTTCAGTTGTTTATTTAGTTGCTCAACATCCAGAAACTGAGAAGAAGTTGCTTGCTGAAATTGATGGGTT TGGTCCTCATGAGCAGATTCCAACAGCTCTTGATCTTCAAAACAAATTCCCCTATCTTGACCAGGTAGTTAAAGAGGCAATGAGGTTTTACGTTGTTTCT CCATTAGTTGCAAGAGAAACATCAAAAGAAGTAGAGATAGGAGGTTATGTTCTCCCGAAGGGCACATGGATCTGGTTAGCACCTGGAGTTCTAGCAAAAG ACCCTAAGAACTTCCCAGAGCCAGACAGGTTCAAGCCAGAGAGGTTTGATCCAAATTGCGAAGAAGAAAAACGAAGGCATCCTTGCGCTCTTATACCCTT TGGAATCGGACCTAGAGCTTGCATTGGCAAGAAATTTTCCATACAAGAAATCAAGCTCTCCCTGATACACTTGTACCGGAAATATTTATTTCGACATTCC CCAACCATGGAAAAACCTCTTGAATTTGAATTTGGCATAGTTCTCAACTTCAAGCGTGGAGTAAAGCTTAGAATCATAAAACGAACTTGA
AA sequence Show only first row Show all	>Potri.006G226700.2 pacid=42769152 polypeptide=Potri.006G226700.2.p locus=Potri.006G226700 ID=Potri.006G226700.2.v4.1 annot-version=v4.1 MDLQVLFTDVPVVTAIICTVFAMLLGLLGYLYGPYWGVRKVPGPPVIPLLGHLPLMAKHGPDVFSVLAKRYGPIFRFHMGRQPLIIVADPELCKEVAIKK FKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLASLVPTMQSFIESATDNFQSSNEEITFSNFSLKLATDVIGQAAFGVDFGLSKP QSASDSINSFHNQGKDNCDVSEFINQHIYSTTQLKMDLSGSFSIIIGLLVPILQEPFRQILKRIPGTMDWKVDRTNRNISGRLDEIVRKKMEEKNRGSKD FLSLILRARESETLSKKVFTPDYISAVTYEHLLAGSITTSFTLSSVVYLVAQHPETEKKLLAEIDGFGPHEQIPTALDLQNKFPYLDQVVKEAMRFYVVS PLVARETSKEVEIGGYVLPKGTWIWLAPGVLAKDPKNFPEPDRFKPERFDPNCEEEKRRHPCALIPFGIGPRACIGKKFSIQEIKLSLIHLYRKYLFRHS PTMEKPLEFEFGIVLNFKRGVKLRIIKRT

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G26170		CYP711A1, MAX1	MORE AXILLARY BRANCHES 1, "cyt...		Potri.006G226700 [exp]	0	1	Pt-CYP711.1
AT2G23970			Class I glutamine amidotransfe...		Potri.009G078200 [exp]	5.00	0.6853
AT1G26310	MADS	CAL1, AGL10, CA...	CAULIFLOWER, AGAMOUS-like 10, ...		Potri.012G100200 [exp]	9.21	0.7649
AT1G65810			P-loop containing nucleoside t...		Potri.004G077100 [exp]	23.81	0.6720
AT4G27220			NB-ARC domain-containing disea...		Potri.001G404875 [exp]	26.88	0.7212
AT1G32960		ATSBT3.3	Subtilase family protein (.1)		Potri.011G151200 [exp]	28.98	0.6630
AT1G65810			P-loop containing nucleoside t...		Potri.004G077650 [exp]	38.24	0.6551
AT1G67030	C2H2ZnF	ZFP6	zinc finger protein 6 (.1)		Potri.014G123700 [exp]	40.49	0.6414
AT5G50335			unknown protein		Potri.012G094000 [exp]	50.19	0.6505
AT2G01260			Protein of unknown function (D...		Potri.010G120700 [exp]	53.44	0.6160
AT1G18400	bHLH	bHLH044, BEE1	BR enhanced expression 1 (.1)		Potri.004G099400 [exp]	58.91	0.6634

Compare expression of checked genes

Potri.006G226700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.