Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	FZF.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G31420 459 / 2e-161 C2H2ZnF Zinc finger protein 622 (.1.2) AT2G24500 417 / 1e-144 C2H2ZnF FZF Zinc finger protein 622 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G006300 [exp] 606 / 0 AT4G31420 463 / 1e-162 Zinc finger protein 622 (.1.2) Potri.002G149800 [exp] 50 / 3e-06 AT1G01930 527 / 0.0 zinc finger protein-related (.1) Potri.005G186700 [exp] 43 / 0.0002 AT1G43860 513 / 0.0 sequence-specific DNA binding transcription factors (.1) Potri.002G073200 [exp] 42 / 0.0004 AT1G43860 560 / 0.0 sequence-specific DNA binding transcription factors (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026949 [exp] 491 / 1e-173 AT4G31420 508 / 3e-180 Zinc finger protein 622 (.1.2) Lus10020150 [exp] 489 / 7e-173 AT4G31420 506 / 8e-180 Zinc finger protein 622 (.1.2) Lus10009236 [exp] 44 / 0.0002 AT1G01930 576 / 0.0 zinc finger protein-related (.1) Lus10038006 [exp] 44 / 0.0003 AT1G01930 575 / 0.0 zinc finger protein-related (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0361 [poplar] [flax] C2H2-zf PF12171 [poplar] [flax] zf-C2H2_jaz Zinc-finger double-stranded RNA-binding CL0361 [poplar] [flax] C2H2-zf PF12756 [poplar] [flax] zf-C2H2_2 C2H2 type zinc-finger (2 copies)
Representative CDS sequence Show only first row Show all	>Potri.006G275300.1 pacid=42768389 polypeptide=Potri.006G275300.1.p locus=Potri.006G275300 ID=Potri.006G275300.1.v4.1 annot-version=v4.1 ATGCCAGGATTAACTTGTAACGCTTGTAATAAGGAATTCGATGATGATGCTGAACAAAAACTCCACTACAAGTCTGAATGGCACCGTTACAATCTTAAAC GAAAGGTTGCTGGTGTTCCGGGAGTGACTGAAGCCCTGTTTGTGGCTAGACAGTCTGCAATTGCTAAAGAGAAAGAGAAGAATGAAACCCCTATGCTTTA TAGCTGTGTTCTATGTAACAAGGGATATCGAAGTTCCAAAGCTCATGATCAGCACCTTAAATCAAGGAGCCATATACTGCGAGCTTCTCAAGGAACAAAC CAGGAAGAGGAGAATACTGTGATTAAACCGCTTCCTCGACGGGAGGTGAATAAGCGTGTTGTGCAAAGGGAGGCAGATGTTAAAGAAAGTGAAGAGAGTG AGGATGAGTGGGAAGAAGTTGATTCGGATGAAGAGTTGGTTGCTGAGGCCACAAAGTCTTTGACTGGTTTGAATGTAAATGAGATGGCCTCCCTTGATGA TATTGTTGAGGATGATGAAGATGATGTGTTGTTGGATCCATCATGTTGCTTCGTGTGTGATCAAGAGCATGATAACATAGAAAGCTGCATGGTTCACATG CATAAGCAGCATGGGTTCTTTATTCCTGATGTTGAGTATTTGAAGGATCCACAGGGTCTTCTTACTTATCTTGGCCTCAAGGTGAAGAGGGATTTCATGT GTTTGTACTGCAATGACAAGCGTCAACCTTTCAACAGCTTGGAAGCAGTTAGGAAGCATATGGAAGCAAAAAGTCACTGCAAAGTACATTACGGTGATGG TGATGAGGATGAGGAAGCTGAGTTAGAAGACTTCTATGATTATAGCAGCAGCTATGTGGCTGAGGATGGTAGACAACTTGTTGCATCAGGTGACATGGCC AACACTGCTGAACTTGGTAGTGGTGGTTCAGAGCTAATTATAACCACAAAATCTGGTAAAAAAGTATCATCCAAAACACTAGGTTCCCGAGAATACTTGC GCTATTATCGCCAGAAGCCACGACCATCGCATGCAAATCATATAGCCATTGCTGCTGCACTTGCGTCCAGATACCGGAGCATGGGGCTGACAACTGTCCA GTCAAGAGAGCAAATGGTGAGGATGAAAGTGATGAAGCAAGTGAGTCGATCAGCAGAGGCCATGCGGACCAAAATTAACATGAAGAATAACGTTATTTGG AACCTGCCCAAGAACGTCCCATATTAG
AA sequence Show only first row Show all	>Potri.006G275300.1 pacid=42768389 polypeptide=Potri.006G275300.1.p locus=Potri.006G275300 ID=Potri.006G275300.1.v4.1 annot-version=v4.1 MPGLTCNACNKEFDDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFVARQSAIAKEKEKNETPMLYSCVLCNKGYRSSKAHDQHLKSRSHILRASQGTN QEEENTVIKPLPRREVNKRVVQREADVKESEESEDEWEEVDSDEELVAEATKSLTGLNVNEMASLDDIVEDDEDDVLLDPSCCFVCDQEHDNIESCMVHM HKQHGFFIPDVEYLKDPQGLLTYLGLKVKRDFMCLYCNDKRQPFNSLEAVRKHMEAKSHCKVHYGDGDEDEEAELEDFYDYSSSYVAEDGRQLVASGDMA NTAELGSGGSELIITTKSGKKVSSKTLGSREYLRYYRQKPRPSHANHIAIAAALASRYRSMGLTTVQSREQMVRMKVMKQVSRSAEAMRTKINMKNNVIW NLPKNVPY

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G31420	C2H2ZnF		Zinc finger protein 622 (.1.2)		Potri.006G275300 [exp]	0	1	FZF.2
AT2G41500		EMB2776, LIS	LACHESIS, WD-40 repeat family ...		Potri.006G045800 [exp]	6.08	0.8456
AT5G07900			Mitochondrial transcription te...		Potri.001G034700 [exp]	7.93	0.8378
AT4G17830			Peptidase M20/M25/M40 family p...		Potri.001G143200 [exp]	11.00	0.8161
AT4G04950		AtGRXS17	Arabidopsis thaliana monothiol...		Potri.004G042200 [exp]	14.69	0.8144
AT5G07900			Mitochondrial transcription te...		Potri.001G035000 [exp]	17.02	0.8383
AT1G08410			P-loop containing nucleoside t...		Potri.009G017000 [exp]	18.73	0.8143
AT3G15460			Ribosomal RNA processing Brix ...		Potri.001G403100 [exp]	18.76	0.7697
AT3G08710		TRXH9, ATH9	THIOREDOXIN TYPE H 9, thioredo...		Potri.006G110100 [exp]	21.44	0.8349
AT2G20560			DNAJ heat shock family protein...		Potri.017G016100 [exp]	23.23	0.8338
AT4G26000		PEP	PEPPER, RNA-binding KH domain-...		Potri.006G277200 [exp]	24.81	0.8053

Compare expression of checked genes

Potri.006G275300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.