Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G50380 2378 / 0 Protein of unknown function (DUF1162) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G100600 [exp] 46 / 0.0008 AT1G48090 3782 / 0.0 calcium-dependent lipid-binding family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022476 [exp] 3060 / 0 AT3G50380 2266 / 0.0 Protein of unknown function (DUF1162) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06650 [poplar] [flax] SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13
Representative CDS sequence Show only first row Show all	>Potri.007G034900.6 pacid=42765338 polypeptide=Potri.007G034900.6.p locus=Potri.007G034900 ID=Potri.007G034900.6.v4.1 annot-version=v4.1 ATGTTCTTCCACGACGCCGTTTACCGGCGACTGGTGTCATTATTGCGGCCGTGGTTGCAAGAAGAACCGGAAATTGAACTCCAATTAGGGTTTATCAACT CTGAATTGACCGCAAAGAAGTTAAAATTCGATGTCTCTGCTCTCAATAATGAATCCGAATCCTCTCGGTTTCAATTTAAAGAAGTCACCGTTGATCACTT GAGTTTTCGCTTCTCCAATTGGTCTTCCCCTGCTTGCAAAATTGGAATTCGCGGTGTCAATATCACTCTTTTAGCTGGGGAAGTGAAGGAGGAGGGGAGT TTGAGAAGGGCGAGGAAATTGAGTGAGGAAAAGAAGAAGGCGGTTGCCGGGTTTGATCCTGAGGGTAGTGCCTTGCATAATGTGCTGGAGAGGATCTTGC TTAACCCACCTTCAAGGAATTGGTTTAAAACCTCTCTGTTGAATCTTCTTCTCAAACATTGCCACTTACAGATTTCCGATACTAATCTGCAAGTGCAGTT TCCCGACTTGAATGACGCTGTAGTTTTTTTGTTGGAACTAAAGGATTTTAATGGAGAATCTGAGCACTCTGACCCTGGGTGTCTTTTAAGAGGGGTTGTT GGTGCAGTTTTTAAACCTCTAAAAGTGGTTTCTTTTGTTATGGATTTTAGAGGTTTTGGGTTTGCCTATAAGATGGAAGATCAGATAAACCACATTTCTT CTTTCACAGATCTGCTTTCTTGCATTAAATTAAATGACCTTCGGGTGGCAGACTTTAATATCCGTGTTCCAAAATTAAGTCTGTTGTTTTCTCCACTTGA TCTCCTTGTTTTGTCAGCTTTTGGTAAACTATCAACGAAAGAACGAAAACATGTCAGAAGTGGTAGACAACTATGGAAACTAGCTGCAAACAGATTAGGA TATGTCCCTTCCTCTCCCAGATTATCATTGCATAAATTAGTTGATTTCATTTGCCTCTGGCTACGTTATCAAAATGCATATGAGTATTTGCTGTCTCTGC TAGGATATTCTGCTGACAACTTATTAAAGAAGTCTGTTATTAAGTTGTCTGAGGACAAAATGTTTCTGAATTCTGTCAAACACAATTGGGGGGAGATTTC TGGCATAGAGAAGGAGTTGCCAGCCGAAGCTATTGCCCAGGCACGACGGATAGCACGATACAGAGCAGTCTCAAACATTCAAAATGGTAAAAATAGTTTC AAAGAATCTTCAATGGATAAACAAGTCAATGTTTTCTCCAAGATCCTTTCAGTATTCATAGTCATTTGGAATGTTATGTACAAGATTTTGCTCTCAATTT TACATTGTTTCTTTTTTATTATACTTTTCTTTCAACGACCAAAACTTGATTGGAATCCGGGAAACAATTCTGAAGATTACAGCTCCCGATATTGCTTCCT GCTAAACTTTGGAAAGATTTTAGTTACTTTTTCTTCAACAAGCAAGCACAAGAATGTTGATGAAAGAATAGAGTCCCATACAGGGATTTCATATTCTGAT ATACACTCATTCAGTCTATCGATTCATATGCTGTTACTTGCATATGTTGATGAAGTTTTTGAACAGTCTTTGTCTCTTTCCTGTGGGAAGCTGAAGGTTA AGTCCTCTTCTGTTATGGAGACTGCAATTGTGGATAGGAGTGTAAAGAATCCTTTTAGTTCAAAAAAAGTACGTCGGAAAGGGAGTGTTGATAAATTAAA AACTATCCTGATGGGTAAGCCTGCACAAGTATTTCTTCCTTCACAAACTAGTGAAACCAGTGTTGCAAATCCAGCTGAAGGAACCTGTAATCCATATTTG CAGACACTTATGGGAGAAATGTGGTTGGCTTGGCAAAAATCTTCTGCGGGATATAAGGATAACGAGATTGCATATTCTGAAACTCCATGGCTTCTTTGTG AGATTAAAAACTGTTTGATGGATCCAAACCTGAAGAGACCAGTTTCTGGGTTTTGGAAATGCAGTTTGACAGCCGGGAAATTAAATTTAGCTTTGGGGTA TTCATCAGTATTGTCATTGGCTATACTGCTTGGCCAGATACAGCATGCTCTAAATTTGAATGAGAGCACTGGGAGGGCAACTGTACCTCTGAATTTTCCT CCAACCATTGAAAATCAGGAAGAAATTAGTTGGGAAGATAAATATGAGTTGTATTCTAATAGACTGAAGTTGACTTTTCTTAGAATGCTTCCGGAGAAAC ATATTGAACTTGGAGTTTTTGTAACTGGTCCTTGTATTGAAATGACACCGAGAAAGGTTGGACTTAACAGTGGGGATAAAGACACGAATCAGGATGATTT TCAACTTGGTTTTGATATCCAAAATATTGAGGTTGTTGTATGGCCAACCTCAAAATCAGATTTGGCATTAACTGGATGGTCAGAATCTGATGGTGCAGAA CCAGAGAGCCACAAATTGCGAGAGCCTCAGATAATTGAAATTCCTAAACCAGATAATGAAAAGTATGCATCTGAGGGATGGATTTCACTTGGTTCTTACT TCAAGATTAGTGGTTTCGATATTTACAAGGGGAATTCAGCAGAAAGAGAACAAAACCAAATCTTTTCAATGAAGCCAATAGCTGCTCGGTTATCATTCTT CAGGGAGTTTGTATATACGTTTAGCACGACTGTCATTGCTTTCTCAACAACTTTCTCTGTGACGGCTTCAGGATTTCATATTATATCATATATGGATGAG TTGTATGTTCTCTTTCAGGTGGTTGCAGGTTTGCTTTCAACAGTTTCGCTTTCATATGCTTTTAGGAGCTTTGATATAAGTGGTTTTATGCCTCTTCAAA ACTTTGTGAGGCAAAATATGGTGTTCAATGAACTTGAGAATGATGAAATTAGTGCTGAAGGAGCAGCTTTGATTTGTAATAGCACTTTGGTCTCAACTAC TGGAACCTTCAACTTCAAGTCGATGGATGTAATTCTTCAGAATTCTAGGATAGATGATAAGGAGGGAAGTTCTGTAAAAACATATGCTGCTATGAGCAAC CAAATGGCTGGGCATGATTTGCCTGATTGTGGAATTTTGATTTCTGTTCATCAAACTCACGCAGAGGTATCTTTGGAAGAGCACAAATTGAAAATTCTCT GTGATTTGCAAGGAATTCAGTTTGTAATTTCTAGATATCCGGATCACATGCTAAAAAGTTTTGATCACTCTGTAGTTAGAAACTTGCTGCAGCAAACTGA GGGTGGATTATATGAAATATTTCTTTCTGATTTCACATTTACATTTTGGCTGGGTCAACCTCACAATAGTTTGAATAACTCGGTTGGTAAAACTTCTTCA AGTGGTAATACATCACAAACAGTGGACAATGCCCATTTGATCAGTGAGTGTGAAACATCAACTGCTCAATCCTCTAGATTCACTCAGAAGTCAGATTTTG CTACAGATATTACAGCTTCATCCCCAAGTCAATGGATTCTCGTAAATGTTACACTTGGTATAATTTTTGTGGCTAAGGGCTCATTAAAGAATTCTCTGGT TGGGCCAAATCAATTCAATAAGCTTACTGCATTGCTTGAAGTTGGGAGAAATCTTCAGACATTCTCTTGGGGAATAAAGGGTGGCGTTCTTGTCCTTGAA ACAGCAGCATTAACAATGTTTTTTCGGTGTGTTGTTTCATATCTCCAACGTATAAAACATCTCTTATCAATCATTAGTTCTTCTGTTAAACAAGCTGAAA ATGCTGAAAATGAGGCCCAAGAGACGCTACATATGACCCGACAAACCAAATGGGAATGGCTTGAAGCTTCCACCATAGACGTGTCTCAGTTTTCTCTTAC TCTTGTTGTTGAAGATGGCTCTGGAGGTTTTCAGGAACTTGTGATTGAGGTTGATGTCCATATGAAGTTCGAATCTGCAATTCTGCTGAGGAAATTCATA TTTAACCTTTCCAGGATGGTGATCTTTTCTCAAGTTCATAGAAATTATGTAGAAAATGAAAATCATGGAAGTCATCAGAGCAAAATGTTGAATAATTTAG TTGCCTCTATATCAGCTGAAAAGCATGAGAATGATCATAAATCAAATCAGGTTTGGGTTGGCATGGGTTCTATTTCAGATTTTGAAATGACAATATCCTT GTCTGAAATACAGATGATTTTATCCATGGTTTCATCCTTCTCCTCTGCATCCAACAAAGAGATAGGCAGTGACCTGAAACGAAGGCGATTGTCCAGTAAC CAAGAACCTGACAACTGTTTGAAAGCTATGGTTCCTGATGGAGCAATTGTGGCAATTCAAGATGTGCATCAACACTTGTACTTTGCTGTTGAAGAAAGGG AAAATAAGTATAGTTTGTTTGGTGTTATGCATCATTCACTTGTAGGGGAGAAGGCACTTTTTAGGGTCAAGCACCATAAGCAAGGAATGTGGAAGTCATC AGTTCTGTGGTTTTCCTTGATATCATTGCATGCTAAGAACAATGTTGGCGAACCATTGCGATTGAACTATCATTCTGGATCAGGTTTTGTTGGGATCTCC AGTGCTAATGATAGTGGTTGGTCACTCTGGAGGATACTTCCTTGTGAGCCTGAAAGCTACAACAGTGATATTGATTGGGAGCCATACAATAAGTTGGTTA AAGATACTTTTTACCTGGTAAATAAGAAGAGTGACTCAGCTGTTGCATTTGTTGATGGAGTTCCGTTGTTTGTTAAAAAGCCTGGACACCCTTTCAAGTT TAAAGTATGTAATCAGTTTCCTTGGACGCATGAGGATGCAGGCAGAATTTCTGGGCAGTGCAGAAGTCTCCCTTGCCTTCAAATTAAAATTGACCATGTT TCTGTGACCATTGTCCATGAACTTTTAGATACAAGGGACAGGTTTCCACTTCTTCGTGGCTGCATCAGTAATACCGAACTTAATCTCCAGATTCTATATT ATAAAACCAGAGTTATGAGCACATCAATTGCTTTGCTTGATTACTTTGATGCCCAAAAAAATTTGTGGAGAGAACTTGTTCACCCTCTTGAAATATGTAC ATTCTATCGTTCAGTTTTCCACATTCAGGATTCAGAAACTGTTCAGCATGGAGCACCAGTTCATTTCTATTGCCGAAGTAAAGAGTTGGACATATCCCTA ACTGAGCTCTCCTTGGACGTACTTCTTTTTGTGATTGGGAAATTACAATTGGCTGGTCCATTTTCATCGAGGAGCTCCATGATTTTGTCCAACAGCTGCA AGGTGGAAAACCAAACAGGTTTGAGCCTTATTTGTCACTTCTACAACAAGAAAAGTGTTACAATAGCCAGAAAACAGTCTGCTTCTGTTTCTTTAAGCAG CCAAATATTGGCAAATCAACCTCCAGAAAGCAAGTCACTTGTTACAATTCAGCTTTCTGATCTTGGATCTTTTGCTACTTCCTCACTTGATATTTCTATC CTAGAAACTCGAGTGCTTGCTTGGAGAACATCTATAGTGTCACTTCAAGATTCAAGAACTTACCCTGGGCCATTTGTAGTGGTTGAGACTTCAAGGAAAT CCGAGGATGGTTTGTCAATTTCGGTTTCTCCTTTAATAAGAATTCATAATGAAACTGAATTCTCCATGGAACTATGTTTTCGACGTTCTCAACAAGATGA AGATGTGTTCGCTCCAATTTTACTGAAGAAGGGGTCTTCTGTTGATGATTCCATGAAAGTGTTTGAGGCTATAGGTTCATCTGGTGGATTAAAGAAGGCA TTAATGTCTTTCACTGTTGGAAACTTCTTATTTTCTTTTAGACCTGAAATCACAGATGATTTGATAAATTCTAAGAGTCCTCTTTCAGCAGAATGGTCAG ACGAGCTTAAAGGGGGAAAGGCTGTTTTCCTTTCTGGAATTTTCGATAAACTAAGCTACAAAGTCCGCAAGGCATTGTCCGTTGATACAATTAAATGTTC CTTTAGCACTGCTGCTTGTACCCTAAAATCTGGAGACGCGCATGCTACTAACCTGCATTTTCTTATTCAAAGCATTGGAAGAGATGTGCCTATCATACAG CCTGATAAGTCTAGTGGTAGTTCTGATATGACTTCAGCTGTTGCATTACAGGAGCAGAAGGAAATTTTTATACTTCCTACTGTAAGGGTGTCCAATTTAC TGCACTCTGAGATACATGTGCTTTTGACTGAGAAGGGTCTATGTACTACTGTTGGTAGTGACAGTTTTGGGAAGCAGGCAGCCATACCACGTGGATCAAC AGTTGACTTTTATGCTAATCCTGCTATATTATATTTTACTGTTACCTTAACTGCTTTTAGTATGAGCTGCAAACCAGTGAACAGTGGTGATTGGGTCAAG AAGTTACTTAAGAACAAAAATAAAGTGCACTTTCTGGACATTGATCTGGAGTTTGGTGGTGGAAAGTATTTTGCATCACTAAGATTGTCACGTGGGTACA GGGGCATATTAGAGGTTTCTGTCTTTACACAATATTCCTTGAAGAACGACACTGAATTTTCACTCTTTATGTTTGCACCACATCAGAAGCCTCTGTCTAG GGATGAGGTCAGGAGATTCGGTTCCACCATTCCTCCTGATTTGGGATTATTTTCTCCTCCTAACTCAATAAGATCATGGTTTTTAAAATCACACAAGACG CGGCTTAAATTGTTAGAGGACTCTGCATCTGAGGCACTGTTAGACTTGGATGCTCTGTCTGGCCTCACTGAGATAAGCTTGGACAAAGAAGAAGGGTCTG GAGAGAAAAGCATTGTGAAGTTTGGGGTTTCTGTGGGACCCTCTTCGAGTAGTGTGATGGTCCCATCACAGATAGTGACTATGGTCCCAAGACATGTTGT ATTTAACGAGTCAGAAGAACATATCACTGTCCGTCAGTATTATTTGGAGAAGGATGAAGTGACAAGCCTTGTCCACATTAACAGTAAACAGAGAACAGCA CTAAAGCTTTGGAATGGAATTAGCGAGAGGAAAGAATTCAGTTTATTCGAGAATTTCATCAGGAAGCATAGAAATGATATCGATACTTCTTTAGTATATA TCCAGTTTCGGCTGAATGACCCTGAATCTAGCTGGTCAGGGCCAGTATGCATTGTTTCATTAGGACGGTTTTTCATAAAATTCAGGAAACAATCAAATCA AGATCAAGCATTAGACAACAGTGCATTCGAATTTGCTGCTATTCATGTGGTTGAAGAAGGTTCTACTGTTGGTGTACACTTCCACAAACCACCAAATGTT ACTCTACCATATCGGATTGAGAATCACTTGCATGATTTATCTCTCACTTTCTGTCAAAAGGATTCATCAGAGAGAGAGATTCTTGGATCTGGCTGTAGTG CTTATTATGTCTGGGATGATTTGACTCTTCCGCGTAAACTGGTTGTTTTAATCAATGATCTTCAACGTGAGATAAACTTGGATAAGGTACGGGCGTGGAA ACCTTTTTTCAAATCGACAAAACTTCGAGGATTGGCATCTCATTCTTTTTTGCACAAAGAGTCCAGAGACCAGAAAAGCTACTTTGATAATTTAAACAGC ATGGATATTATGAAGGTGGGGTATGAAGTATATGCTGAGGGTACCACACGAGTTTTAAGAATTTGCGAGTTTTTGGATAGTCACAAGAGAGATAGATTGT CTCAGTTACGTGCCAAGATCCAAGTGAGAGTGTTTCATTTTGCAATCCACTTTCTTGAGCATGAAAAAAAGGATGTTGATGAGGTTGTGGATCTCACTTA TACGCCACTTATAGTTGCAAGGCTTGGAAATATCAGTGTGGACTCAGTGTTCACTGATCTGAAGAAATTTAACCGGATCAGTGTGCAGTCATTAAATGTG GATCAGAAGTGGTTAGGTTCTCCTTTTGCGGCAATGCTTCGCAGACATCAATCAGACTACAGTGACTCAAATGCTTCTGTACTCGAATTTGTCCTTGTCC TACTTTCAACCAGCTCCAATGTTAGGCAAGTTGAATACTCATCCATGATTCTGCAGCCAATTGATTTGAATCTTGATGAGGAAACTTTAATGAGAATTGC CTCATTTTGGCGTACGTCTCTCAGTGACAGCAGTACTCCAAGTCGACAACATTACTTTGATCATTTTGAGATCCATCCAGTGAAGATTATTACTAATTTT CTTCCCGGGGACACGTATTCAAGTTATAATTCAGCACAGGAGACCCTAAGGTCCTTACTGCATAGTGTAGTAAAGGTTCCTCCCATAAAAAATATGGTTG TTGAACTCAATGGGGTACTGGTTACTCATGCTTTAATAACCATGCATGAATTGTTTATCAGATGTGCACAGCATTATTCATGGTATGCAATGAGGGCTAT CTATATTGCAAAAGGAAGCCCTTTGCTTCCGCCAGCTTTTGCATCCATATTTGATGATTTGGCTTCGTCTTCTCTCGACGTCTATTTTGATCCTTCACGT GGGTTGATTAAGATTCCAGGTTTCAATTTAGGTGCATTCAAATTCCTCAGTAAATGTATCAATGCTAGAGGGTTCTCGGGGACAAAACGCTACTTTGGTG ACCTGGAAAAAACTTTGAGAACAGTGGGATCCAATATGGTGTTTGCTGCTGCCACTGAAATATCAGACTCTGTTCTGAAGGGAGCAGAAACAAATGGTTT TGATGGAATGGCTAGTGGTTTCCACCAAGGGATTCTGAAATTGGCTATGGAACCATCACTACTGGGGACTGCTTTAAAAGGCGGCGGCCCAGATAGAAAG GTGCAGCTTGATCGAAATCCAGGCATTGATGAGTTGTATGTCGAAGGATACTTGCAAGCAATGTTGGATACAACGTACAGACAAGAGTATCTTAGAGTCA GAGTGATTGATGATCAGGTTTTCCTTAAAAACCTACCCCCGAATAGTGCCCTCATAGATGAGATCATGGATCGTGTGAAGGGATTCCTGATAAGCAAAGG ATTGCTGAAAGGTGATCCTTCAACATCTTATCGCCCCTTGCGTCATCTTCAAGGAGAGAGTGAATGGAAAATTGGACCAACAGTGTGGACATTGTGTGAA CATCTTGTTGTGAGCTTTGCAATCCGCATGCTGAGAAAGCAAACTGGAAAATTCGTGGCCAAGATTAATTTGAAAAAAGAACCAGAAAGCGATGATGGCA AAGCAATTGTCCCTGCAGACTCCCGTGAACAGGAGAAGAAGGGGAAGTTTATATGGAAACGGGGCATTCGTAGCTTTGTGTTTTCAGGCATTCTTGCATA TATTGATGGAAGGCTATGTCGTTCTATTCCTAACCCTTTAGCACGACGAATTGTCAGTGGCTTTTTGTTCAGCTTTTTGGACAAAAACGATAGTGGATAG
AA sequence Show only first row Show all	>Potri.007G034900.6 pacid=42765338 polypeptide=Potri.007G034900.6.p locus=Potri.007G034900 ID=Potri.007G034900.6.v4.1 annot-version=v4.1 MFFHDAVYRRLVSLLRPWLQEEPEIELQLGFINSELTAKKLKFDVSALNNESESSRFQFKEVTVDHLSFRFSNWSSPACKIGIRGVNITLLAGEVKEEGS LRRARKLSEEKKKAVAGFDPEGSALHNVLERILLNPPSRNWFKTSLLNLLLKHCHLQISDTNLQVQFPDLNDAVVFLLELKDFNGESEHSDPGCLLRGVV GAVFKPLKVVSFVMDFRGFGFAYKMEDQINHISSFTDLLSCIKLNDLRVADFNIRVPKLSLLFSPLDLLVLSAFGKLSTKERKHVRSGRQLWKLAANRLG YVPSSPRLSLHKLVDFICLWLRYQNAYEYLLSLLGYSADNLLKKSVIKLSEDKMFLNSVKHNWGEISGIEKELPAEAIAQARRIARYRAVSNIQNGKNSF KESSMDKQVNVFSKILSVFIVIWNVMYKILLSILHCFFFIILFFQRPKLDWNPGNNSEDYSSRYCFLLNFGKILVTFSSTSKHKNVDERIESHTGISYSD IHSFSLSIHMLLLAYVDEVFEQSLSLSCGKLKVKSSSVMETAIVDRSVKNPFSSKKVRRKGSVDKLKTILMGKPAQVFLPSQTSETSVANPAEGTCNPYL QTLMGEMWLAWQKSSAGYKDNEIAYSETPWLLCEIKNCLMDPNLKRPVSGFWKCSLTAGKLNLALGYSSVLSLAILLGQIQHALNLNESTGRATVPLNFP PTIENQEEISWEDKYELYSNRLKLTFLRMLPEKHIELGVFVTGPCIEMTPRKVGLNSGDKDTNQDDFQLGFDIQNIEVVVWPTSKSDLALTGWSESDGAE PESHKLREPQIIEIPKPDNEKYASEGWISLGSYFKISGFDIYKGNSAEREQNQIFSMKPIAARLSFFREFVYTFSTTVIAFSTTFSVTASGFHIISYMDE LYVLFQVVAGLLSTVSLSYAFRSFDISGFMPLQNFVRQNMVFNELENDEISAEGAALICNSTLVSTTGTFNFKSMDVILQNSRIDDKEGSSVKTYAAMSN QMAGHDLPDCGILISVHQTHAEVSLEEHKLKILCDLQGIQFVISRYPDHMLKSFDHSVVRNLLQQTEGGLYEIFLSDFTFTFWLGQPHNSLNNSVGKTSS SGNTSQTVDNAHLISECETSTAQSSRFTQKSDFATDITASSPSQWILVNVTLGIIFVAKGSLKNSLVGPNQFNKLTALLEVGRNLQTFSWGIKGGVLVLE TAALTMFFRCVVSYLQRIKHLLSIISSSVKQAENAENEAQETLHMTRQTKWEWLEASTIDVSQFSLTLVVEDGSGGFQELVIEVDVHMKFESAILLRKFI FNLSRMVIFSQVHRNYVENENHGSHQSKMLNNLVASISAEKHENDHKSNQVWVGMGSISDFEMTISLSEIQMILSMVSSFSSASNKEIGSDLKRRRLSSN QEPDNCLKAMVPDGAIVAIQDVHQHLYFAVEERENKYSLFGVMHHSLVGEKALFRVKHHKQGMWKSSVLWFSLISLHAKNNVGEPLRLNYHSGSGFVGIS SANDSGWSLWRILPCEPESYNSDIDWEPYNKLVKDTFYLVNKKSDSAVAFVDGVPLFVKKPGHPFKFKVCNQFPWTHEDAGRISGQCRSLPCLQIKIDHV SVTIVHELLDTRDRFPLLRGCISNTELNLQILYYKTRVMSTSIALLDYFDAQKNLWRELVHPLEICTFYRSVFHIQDSETVQHGAPVHFYCRSKELDISL TELSLDVLLFVIGKLQLAGPFSSRSSMILSNSCKVENQTGLSLICHFYNKKSVTIARKQSASVSLSSQILANQPPESKSLVTIQLSDLGSFATSSLDISI LETRVLAWRTSIVSLQDSRTYPGPFVVVETSRKSEDGLSISVSPLIRIHNETEFSMELCFRRSQQDEDVFAPILLKKGSSVDDSMKVFEAIGSSGGLKKA LMSFTVGNFLFSFRPEITDDLINSKSPLSAEWSDELKGGKAVFLSGIFDKLSYKVRKALSVDTIKCSFSTAACTLKSGDAHATNLHFLIQSIGRDVPIIQ PDKSSGSSDMTSAVALQEQKEIFILPTVRVSNLLHSEIHVLLTEKGLCTTVGSDSFGKQAAIPRGSTVDFYANPAILYFTVTLTAFSMSCKPVNSGDWVK KLLKNKNKVHFLDIDLEFGGGKYFASLRLSRGYRGILEVSVFTQYSLKNDTEFSLFMFAPHQKPLSRDEVRRFGSTIPPDLGLFSPPNSIRSWFLKSHKT RLKLLEDSASEALLDLDALSGLTEISLDKEEGSGEKSIVKFGVSVGPSSSSVMVPSQIVTMVPRHVVFNESEEHITVRQYYLEKDEVTSLVHINSKQRTA LKLWNGISERKEFSLFENFIRKHRNDIDTSLVYIQFRLNDPESSWSGPVCIVSLGRFFIKFRKQSNQDQALDNSAFEFAAIHVVEEGSTVGVHFHKPPNV TLPYRIENHLHDLSLTFCQKDSSEREILGSGCSAYYVWDDLTLPRKLVVLINDLQREINLDKVRAWKPFFKSTKLRGLASHSFLHKESRDQKSYFDNLNS MDIMKVGYEVYAEGTTRVLRICEFLDSHKRDRLSQLRAKIQVRVFHFAIHFLEHEKKDVDEVVDLTYTPLIVARLGNISVDSVFTDLKKFNRISVQSLNV DQKWLGSPFAAMLRRHQSDYSDSNASVLEFVLVLLSTSSNVRQVEYSSMILQPIDLNLDEETLMRIASFWRTSLSDSSTPSRQHYFDHFEIHPVKIITNF LPGDTYSSYNSAQETLRSLLHSVVKVPPIKNMVVELNGVLVTHALITMHELFIRCAQHYSWYAMRAIYIAKGSPLLPPAFASIFDDLASSSLDVYFDPSR GLIKIPGFNLGAFKFLSKCINARGFSGTKRYFGDLEKTLRTVGSNMVFAAATEISDSVLKGAETNGFDGMASGFHQGILKLAMEPSLLGTALKGGGPDRK VQLDRNPGIDELYVEGYLQAMLDTTYRQEYLRVRVIDDQVFLKNLPPNSALIDEIMDRVKGFLISKGLLKGDPSTSYRPLRHLQGESEWKIGPTVWTLCE HLVVSFAIRMLRKQTGKFVAKINLKKEPESDDGKAIVPADSREQEKKGKFIWKRGIRSFVFSGILAYIDGRLCRSIPNPLARRIVSGFLFSFLDKNDSG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G50380			Protein of unknown function (D...		Potri.007G034900 [exp]	0	1
AT1G29400		AML5	MEI2-like protein 5 (.1.2)		Potri.002G059800 [exp]	2.44	0.8768
AT4G11110		SPA2	SPA1-related 2 (.1)		Potri.003G137100 [exp]	3.74	0.8345
AT5G07980			dentin sialophosphoprotein-rel...		Potri.012G061400 [exp]	3.74	0.8760
AT4G32820			Tetratricopeptide repeat (TPR)...		Potri.018G057900 [exp]	4.89	0.8747
AT2G25660		EMB2410	embryo defective 2410 (.1)		Potri.018G034700 [exp]	6.48	0.8212
AT1G77310			unknown protein		Potri.002G078800 [exp]	7.34	0.8275
AT1G07705			NOT2 / NOT3 / NOT5 family (.1....		Potri.017G065900 [exp]	8.00	0.8300
AT1G63700		EMB71, MAPKKK4,...	YODA, MAP KINASE KINASE KINASE...		Potri.012G143900 [exp]	8.12	0.8194
AT1G02080			transcription regulators (.1.2...		Potri.002G143000 [exp]	8.48	0.8570
AT1G17680			tetratricopeptide repeat (TPR)...		Potri.013G128900 [exp]	8.48	0.8373

Compare expression of checked genes

Potri.007G034900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.