Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G39420 3458 / 0 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G086100 [exp] 5477 / 0 AT4G39420 3493 / 0.0 unknown protein
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005786 [exp] 3757 / 0 AT4G39420 3258 / 0.0 unknown protein Lus10006813 [exp] 1807 / 0 AT4G39420 1662 / 0.0 unknown protein Lus10006814 [exp] 596 / 0 AT4G39420 522 / 3e-163 unknown protein Lus10030711 [exp] 453 / 1e-144 AT4G39420 436 / 7e-140 unknown protein Lus10014011 [exp] 221 / 3e-66 AT4G39420 188 / 4e-56 unknown protein Lus10014012 [exp] 203 / 3e-59 AT4G39420 172 / 1e-49 unknown protein Lus10008760 [exp] 134 / 1e-35 AT4G39420 142 / 1e-39 unknown protein Lus10014010 [exp] 79 / 6e-17 AT4G39420 51 / 9e-09 unknown protein
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF14649 [poplar] [flax] Spatacsin_C Spatacsin C-terminus
Representative CDS sequence Show only first row Show all	>Potri.007G078650.2 pacid=42766776 polypeptide=Potri.007G078650.2.p locus=Potri.007G078650 ID=Potri.007G078650.2.v4.1 annot-version=v4.1 ATGGATTACTGTCTTGGCGGTGAGAGCCCGGCAGTTCTGCAGCTCCATAAATGGGGCCCCTCTCAGTTCAATATTGACTTGTCGGAATTTCGGGAGGGTT TTATATCGCCGACGAGGGAGCTTTTGCTGTTACTGTCTTATCAATGTGAAGCCTTGCTCCTTCCTTTAGTTGCCGGGGAATCGGTAAGTAATCGTGTTTC AGAACCTTTGAATGATGAAAGGCTTCAATGTCGATCTTCAGCAGCTTTCAGCTCTGAATCATGGACAGAACCTAGTAGGTCAGATTTGAAGGATGATATT CCATACACTTCTGCATCAGTAAAGGATTTTGATAATGGTTTTTCTCTTGAACACGAATTTTCAAGATCTAATAATTCTCGTTTTGTTTGTGATGTGAATT CACTGGCTTGGGGTGTGTGTGGGGATACTTATAATCAGCACAAGGAGGCTTCATTTAGAGAGTTTCTATTTGTGTCTAGTAGCAATGGTGTTACAGTGCA TGCTTTCCGTAAGCCTGATATTGATGGCGGAACAACTAAAACTGCACTTGAGGACGAGTTTGGTCAAGGGAGGTGGGTTGATTGGGGCCCTTCCTCTACA CCAGCTCAAAATTTGAAGGATCGGGGCTCTTCAGGCTTGTGTTCTGAAGGCACATCTACCGTCGTGGCTGATGACAGGGCCAATGGAAATAGAGGAAGTC TGCAAGACATAGATAAGGAGAGTGGGGCTGATGAGCTGTTGAGAGGTGTTGCTTCAAAGAGGTGGTTGCGCTCATTCTCCATCAAAGTCAAGACTATCAA ATCTGAGGGTAACATCTGGACCAGGTTTCCAGAGAAGGCATCTTTTCCTGGCTCTGCAGAGGTTGTTTCCTTTAGCGTTTTTGACAGGAATTCACCACTA CTGAACCTACTTTATCATGACAATTCCATCACAACAAATGGGGAGGAGAGCAAGTGCGAATCCATGTTCAATCCAGAGAACGAGAGAGTTATAACCAAGT CTGATGATTTTTGTATTGGTTCATACAAATGCTCCCGAGTTTTCCCCAGCAATTCACATCACCTAATTGGATTTGTTTTAACACTGGTTGATTCTGCTTT TGTGAGTACTGGGAATGAAAGTGAAAGAAGCAAGACAAAAAGTATACTTCTTGTTGGAAAGCTAGACAGTTGGGGAATCCAATGGGTTTCCTTAGTGAAG CTTACGCAAAGTGTACATGTAGACTATGTGTCTGAGTGGGCAGACTTTTGCTTTTCTGATAACCTTCTTGTTTGCCTAAATGCTTCTGGCTTAATCTACT TTTATGCTGCAATGTCCGGTGAGCTTGTTGCTTATGTAGATATTTTACAAGCTTCTGGGTTAAACCCTCATTCAGTCCTATGGCAGCAAGAAAAAATGAC TATGGCTGCTGATTTTCAGATCAAACAAGTTGAAGAAGTTCATGATAAGTCAACTTCCCAATGTGTTGATCTCCTTGGTAAAGGAATGTTTAGAAAATTG CTTACTGGATCCCATACGTCCTTTTTAGCTGTAGTTGATGAATATGGAGTAGTGTATGTCATGCGTACTGGTGACTATTTCTCAAACAACTCCTATGCTT GTGATAAATTGCTTCCACATTTTCAACATTTAGGGCTTGGGATATTGGCTGGCTGGAAGGTTGGTGGTTCTGACATTGGGCACCAATGGGTATATTCTAA TGATCCATCCACTAGGAATGAAAAGGTCTTCTTTTTGGATTATGCTGGAAAAAATGCACTTCATAAAATCCAAATCTCGAACTGCCATGGGTGTGAGGAC TTGATGAATGGTTTTTCTGAGATAGCCACTCACACATTTCATGATTCTGAAGTATGTTCGCACCTGATGCGGAAAGTCTTTCTTCCCACAAATAGATCTA GTGAAGATGATTACATCTGTTTTTCTCCTATGGGAGTCACTCGACTCATTAAGAAGCACGATGCTAAAAGTCAAAGCACTACTCAACTTGTTCATTTTAA TATGCACACAAGCTCAGCAGTTCTTGATGACAGATGCTTGAATACTAGGGTTAACATGAGTTATAGCCAGGGAAAGGGAGAAGCTTCTTTTGGAGAAGCA GTTGGTTGCACCTTCCAAGGATTCTTTTATTTGGTGACTGAAGTTGGTCTTTCAGTTGTTCTTCCCTCTTTTTCTGCTACATCAGATTTCCTTCCTGTTG AAACCATTGGATATCAGCAGCACCTTATCAACACAGATATTGGATGGCGAGCAAGAAGAATGCTGGAAATAAGAGAGTCAATTGAACCCTTCTCACCTTG GAAAGTAGAAGTTTTGGATAGAGTGCTTCTCTATGATGGCCCCGCAGAGGCAGATCACTTATGTTTGACAAATGGGTGGGAGTTGAAAATCTCTAGGTTG TGGTGGCTACAAATGGCATTGGAATACCTGAAATATGATGAAATAGAGCGATCTCTGGAAATGCTTGTCAGCATTAACCTAGCAGAAGAAGGCATTTTGA GATTGCTCTTTGCTGCAGCTTATCTGATGTCTCACAGAAATAGCAATGATAATGAGGTCTCTGCTGCATCAAGGCTCCTTGCATTAGCCAGCCACTTCAC AACTAAAATGATCCGGAAATGTGGGTTACTCCAGCATAAGAAAGATGCATATGTATTACCTGGTTTTGGGATGATCCCTTTGCTCTCTCTTCCACCAGTT TTACCGCATAAATTACAGAATGAAATGGGGGACTCCAGAAGTCTTCATGATATGGCTCACCTTTTGGAGATTATTCGGAATCTTCAATCTGGACTGAGCT CAAAATTGAAGAATACGGGTGTGGGATTGGTGGATGGCAGGGAGGAATTGAGCTTGGTGGAGGCAAATTTATCGCAGGACGAATCTCAGCTTTCAATTCT TTCAGCAGATGCTACATCATCAGACACACCAAACCAGCAAGAACTTCTGGTTTCTGCATCTTCTGTTGTTTCTAATAATGAGAAGCTTGCTTTGATGCAT CGTGATTCCTTGGATATAGAAGATTCAAATGGAGTATCTGTTCTTGTGCCACAGGGTGGTGATTGGGGAAAAAACGTTTTTCCATCTGAAAACCCTAAGG AGATGATTGCACGATGGAAAATGGATAATTTAGACGTAAAAACTGTCGTTAAAGATGCACTACTATCTGGTCGTCTTCCTTTGGCAGTTTTGCAATTGCA TCTTCATCGTTCTAGAGATTCAGAGACTAATAAAGAGCCACCCGATACTTTTAGTGAAGTTCGTGACATTGGAAGAGCCATTGCTTATGACTTATTTTTA AAGGGGGAAACTGAACTTGCTGTTGCAACGTTGCAAAGGCTTGGGGAGGATGTTGAAACCTGCCTCAAGCAGCTATTGTTTGGCACGGTCAGGAGATCTC TTCAACTTCAAGTGGCAGAAGACATGAGAAGATATGGTTATCTGGGACCATATGAATGGGAAACATTGGAGAAGATATTAATCATCGAGAGGCTGTACCC TAGCAGTAGTTTCTGGAGAACTTTTGTTGGTCGGCAGAAGGCATTAAAGAGAGCTACATCGACTTTGAATTCACCAGGCCAAATTAAGCTGCAGCTATTG CCTTCATATCTGTTTAGCAATCTTATCATTGAGTGTGGTGAAATTGATGGAGTAGTTTTAGGTTCATGGACAAGCATCAATGGAAACTCTCCTGATCCTG TAGTTGATGAAGATACTGCTCATGCTGGATACTGGGCTGCTGCTGCAGCTTGGTCTAGTGCCTGGGACCAGAGAACCATTGATCGTATAGTTTTGGATCA ACCTTTCCTTATGGGCGTTCATGTATTGTGGGAATCTCAACTAGAGTACTATCTATGCCACAATGACTGTGAGGAAGTTTCCAAACTTTTGTACCTCATA CCTACATCTGTTTTATCAGATGGAAGCCTCCAGATCACTTTGGACAACTTACAGCATGCTCCAGAGGTTGGATGCAATCGTGAAATTCCTGAGTACAACA GTTATATATGCTCTATTGAAGAATTGGATTCAGCGTGCATTGATATTCCAGGGGTCAAGATTTTCAGGTTTCCTGCCAATGCATTTTGCTCTATGTGGTT AAGAATGCTCATGGAGCAGGAGCTTGCAAAGAAATTTATATTTTTGAAGGAATACTGGGAAGACACTGCTGAGATTGTAGCTCTGCTTGCTCGTTCAGGC ATCATAACTAGCAGGTCTGATAAAATGACATTGGAGGACTATTCTGTTGAGGCTTCATCTGATCTCAATATAACAGATGATGCTGTCCCCATGGAAGCTT TGCATAAATTACTCTTACATTACTGCGTGCAATATAACTTGCCAAATCTTTTGGACCTTTATCTTGACCATTGCAAGTTGGTTCTAGATAATGATTCACT TGGTTCATTACAAGAAACTGCAGGTGATTGTCAATGGGCAAAATGGTTGCTTTTATCTAGGATTAAGGGGCATGAATACAATGCATCATTCTCTAATGCT CGAACAATAATGTCACCTAATATAGTTTCTGATAGCAACCTCAATGTTCTGGAGATCGATGAAATAATTCATACTGTTGATGATATAGCGGAAGGTGGGG GTGAAATGGCAGCTTTAGCAACTCTAATGTATGCCCCTGACCCAATACAAAATTGCTTGAGCAGCGGTAGTGTGAAGAGGCATGGTAGCTCATCAGCTCA GTGCACTTTAGAAAACCTCAGGCCCACTTTGCAGCGATTTCCTACTCTGTGGCGCACACTTGTTGCAGCAAGTTTTGGTCATGATACAACTTCTAATTTC TTGGGTCCTAAGGGAAATAATGCTTTAGCAGACTATCTAAATTGGCGTGACAATATCTTCTTCTCTACTACACATGATACTTCACTTCTACAAATGCTGC CATACTGGTTTCCTAAGACCGTGCGGAGGTTGATTCAACTTTATATTCAGGGTCCTCTTGGTTGGCAATCAGTGTCAGGTCTGCCTACTGCAGACACTTT GTTGTACAGAGACTTTGATTTTTTCATGCATTCTGATGAAAATACAGAGCTAAATGCTGTCTACTGGGAGGCAACTATCCAAAAGCATGTTCAAGAGGAA CTCTATGATTCTTCACTTGAGGAAACTAAACTTGGGCTTGAGCACCATTTACATTGTGGGCGTACACTGGCAGCTTTTAATCATATCCTCAGTGTTAGAG TTCAAAAGTTGAAATTAGAAGGCCAATCTGTTGCTTTGTCACATGGTCAACAAAATTTTCAATCCGATGTTCAGGCACTTCTTGCACCTTTGACACAAAG CGAAGAGGCTGTTCTTTCTTCGGTCATTCCACTTGGTGTCGCTCATTTTGAGGATTCTGTCTTGGTTGCATCATGTGCTTTTCTCCTTGAACTTTGTGGT TTATCTGCCAGCATTCTTCATGTGGATGTTTCTGCCTTGAGACGGGTATCTTCATTTTACAAATTGAGTGAGAACAATGAGAGATATAGCCAAATTTCAC CTAAAGGTAAAGGTTCTGCACTTCACGTGGTATCGCGTGAAGGTAATGTAGTAGAGTCTCTGGCTCGATCACTTGCAGATGAGTATCTGCACAATGATTG TGTAACCAACACTAAGTTAAAGGGGACTTCAAATTCATTCATTGGCAAACAATCTTCAAGAGTTCCAATGCTAGTCCTGCAGCATTTGGAGAAAGCTAGT CTTCCAATAATGATGGATGGAAAGACTTGTGGATCTTGGCTACTGACTGGTAGTGGTGATGGAACTGAATTAAGAGATCAACAAAAAGTAGCAAGCCAAC ACTGGAATTTAGTTACAGCTTTCTGTCAGATGCATCAACTTCCCTTAAGCACAAAGTACCTTGCTGTCTTAGCAAGAGACAATGATTGGGTTGGATTTCT GTCTGAAGCTCAGATTGGAGGATACCCTTTTGATACAGTCGTCGAAGTAGCAACCAAGGAGTTCAGTGACCCACGTCTCAAAATTCATATATTAACAGTC TTAAAAGGCATGCAGTCAAGGAAGAAATCTGGTTCTCCAGCATATTCAGATACTGGGGAAAGTGGAAGTGAAACTTACTGTTTCCAGGAGGACATACTTA TTCCTGCTGAGCTCTTTAGAATCTTAGCAGATTGTGAGAAGCAGAAAAATCCTGGAGAGTCTCTCTTGAAGAAAGCAAAGGAGATGTCCTGGTCAATTTT GGCATTGATTGCATCATGCTTTCCTGATGTGTCTCCCTTGTCCTGTCTAACAGTTTGGCTGGAAATTACTGCAGCGAGGGAAACTTCATCCATCAAGGTG AATGACATTGCATCCCAGATTGCAAATAATGTTGGAGCAGCTGTGGAAGCTATAAATTCCCTGCCAGCTGGTAGCAGGGTCCTGACAGTTCATTACAATC GGCATAATGCAAAACGCAGGCGTCTTATGGAGCCAATTTATGTGGATGTTTTGACTACTTATGGTGGACCAACAAGGTCTGTTGCCCAAGGCACAGTTGC TGAAGATGAAAGAAGAGTAGATGTTCGTGAAAGTGTAAATGTTTCAAGTGATTCTGGTCAAGGACCTGTGTCTCTCTCTAAGATGGTGGCAGTGCTTTGT GAACAACTGTTGTTTCTACCTCTGTTAAGGGCTTTTGAGATGTTTCTTCCTTCGTGTTCTTTGTTACCTTTCATCCGCTCTCTTCAGGCATTTTCCCAAA TGCGTCTATCTGAAGCTTCAGCCCATCTGAGTTCCTTTTCTGTCAGGATAAAGGATGAACAATCCAGTATGCAGGCAAACATAGGAATTGAAGGGCAGGT CAGAACTTCGTGGATAAGCTCCACGGCTGTAAAAGCTGCCAATGCCATGCTTGTAACTTGTCCATCTCCTTATGAAAAAAGATGTTTGTTACAACTTCTT GCCGCAACGGACTTCGGTGATGGTGGATCTGCTGCAACATATTATCGAAGACTTTACTGGAAAATCAATTTAGCTGAGCCTTCACTGCGGAAGGATGACA CTGTACATCTAGGAAATCAGGCTCTAGATGATGATTCACTTTTAGAAGCATTGGAAAAGAACGGGCATTGGGAGCAAGCACGTAATTGGGCCAGGCAGTT GGATGCCAGTGGTGGACCTTGGAAGTCTTCTGTTCACCATGTTACTGAAATTCAGGCTGAATCCATGGTAGCTGAGTGGAAGGAGTTCCTTTGGGATGTT CCAGAAGAGCGAGTTGCTTTATGGGGCCACTGCCAGACACTGTTCGTCAGATATTCCTTCCCTCCTTTACAGGCTGGGTTATTTTTCCTTAAACATGCTG AAGCTGTTGAGAAGGATCTTCCAGCGAGAGAGCTTCATGAATTGCTGCTGCTTTCTCTTCAATGGTTAAGTGGGATGATAACTCTGTCTAATCCAGTTTA TCCAGTGCCCCTTCTGCGAGAAATTGAGACTAGAGTATGGCTCTTGGCAGTAGAATCAGAAGCTCAGGCAAAGAGTGATAGAGACTTTACTTCAACCACT TTGAGTCGGGATCCTTTAATTGGAAATACTTCCACTATCATTGACAGGACTGCAAGTTTAATAACGAAGATGGACAATCATATCAATACAATGAGGAGCA GAACTATAGAGAAACAAGATGCAAGGGAAAATAACCTGACACAGCACAAAAACCAAGTATTGGATTCCATCACTCAGACAACAGGGAGTAGTACAAAGCC AAAACGGAGGGCCAAAGGCAATGCACTATCACGACGACCATTAATGGACCCCATTGATAAAAATACTGAGCCTGAAGATTTTTCTACAAACCTTTTTTCT AGAGGTGACTTGCTGTTGCCAGATGAAAACTTAAAGATAGAAATGTCTTTTTCGAAGTGGGAGGAAAGGGTTGGACCTGCAGAGCTGGAAAGAGCTGTTC TTTCTTTATTGGAGTTTGCACAAATAACAGCTTCCAAGCAACTTCAATATAAGCTGTCTCCAGCACACACCCCTCATGAATTTATACTTGTTGATGTTAC TCTAAAGCTTGCAACTATATCTACTCCTGGTAGCAAAATATCCATATCAATGCTTGATGAGGAAGTGCGTTCTGTGGTCAAGTCACATAATATATTAACT GAGCAGCATCTGGTTGATCCACTGCAGATGCATGGATTGGAATTTTTTACTATGCCAATGAAGATCTTGGAGAAATTGGTTACTGTTTTTACTGAAGGTA GTGGACGCGGACTGTGCAAGAGAATCATAGCAGTTGTAAAAGCTGCAAATGTCTTGGGTCTTTCTTTTTTGGAGGCATTTGATAAGCAGCCAATCGATTT GCTCCAGCTGCTTGCTCTTAAAGCACAAGAGTCATTTGAACAAGCATCTCTCATAGTGCAAACTCATTCCATGCCAGCTGCTAGTATTGCTCAGATTCTT GCAGAATCCTTTCTAAAGGGTCTATTGGCTGCACATCGTGGGGGGTACATGGATTCTCAGAAGGAGGAAGGACCTGCTCCTCTATTGTGGAGATTTTCAG ACTTCTTAAAATGGGCAGAGCTTTGTCCTTCTGAACCTGAAATTGGTCACGCGTTGATGCGTTTGGTGATTACTGGAAAAGAAATACCACATGCCTGTGA GGTTGAACTTCTTATCCTGTCACACCACTTCTACAAATCATCAGCATGCCTGGATGGAGTTGATGTTCTTGTATCCCTTGCTGCCACCAGGGTGGAAGCT TATGTTTCTGAGGGTGATTTTCCATGTTTGGCTCGCCTGATAACTGGAGTAGGAAATTTCCATGTCCTTAATTTCATTCTTGGCATTCTCATAGAAAATG GTCAGCTGGATCTTCTTCTTCAGAAATATTCAGCTGCTGCAGAGACAAATGTGGAAGCTGCAGAGGCTGTCAGAGGATTTCGGATGGCTGTTCTTACGTC ACTGAAGCATTTTAACCCCAAAGATCATGATGCATTTGCTATGGTCTATAACCACTTTGACATGAAGCATGAAACTGCTGCTCTTTTCGAGTCACGGGCA TGGCAGTCTTCTGAGCAGTGGTTTCACCGTTATGATAAAGACCAAAATGAAGACCTCCTTGAATCAATGCGATATTTCATTGAAGCAGCTGGAGTTCACT CTTCCATTGATGCTGGAAATAAAACTCGCAGAGCTTGTGCTCATGCATCCCTTGTTTCCCTGCAAATTCGAATGCCAGATTGCAAGTGGCTGAACCTGTC TGAAACCAATGCTAGGCGATTATTAGTTGAGCAATCCCGTTTCCAGGAGGCCTTAATTGTTGCTGAAGCCTATGGTCTTAACCAGCCAAGTGAGTGGGCA CTGGTGCTTTGGAATCAGATGTTAAAACCAGAACTAACAGAAGAGTTTGTCGCTGAATTTGTGGCTGTTCTTCCACTTCAGCCATCAATGCTTGTTGAAT TGGCAAGGTTCTACAGGGCTGAGGTAGCAGCCAGAGGTGACCAATCCCAATTCTCAGTTTGGCTGACTGGAGGAGGTTTACCTGCAGAATGGGCTAAATA TCTGGAGAGATCGTTTAGATGCTTGTTAAAGAGGACTCGGGATTTGAGGTTAAGGGTGCAGCTGGCCACCACGGCAACTGGTTTTAGTGACATCCTTGAT GTTTGCATGAAAGCATTGGACAAGGTCCCTGACAATGCTGCGCCACTAGTCCTCAGGAAAGGTCATGGCGGTGCCTACCTTCCGCTGATGTGA
AA sequence Show only first row Show all	>Potri.007G078650.2 pacid=42766776 polypeptide=Potri.007G078650.2.p locus=Potri.007G078650 ID=Potri.007G078650.2.v4.1 annot-version=v4.1 MDYCLGGESPAVLQLHKWGPSQFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVSNRVSEPLNDERLQCRSSAAFSSESWTEPSRSDLKDDI PYTSASVKDFDNGFSLEHEFSRSNNSRFVCDVNSLAWGVCGDTYNQHKEASFREFLFVSSSNGVTVHAFRKPDIDGGTTKTALEDEFGQGRWVDWGPSST PAQNLKDRGSSGLCSEGTSTVVADDRANGNRGSLQDIDKESGADELLRGVASKRWLRSFSIKVKTIKSEGNIWTRFPEKASFPGSAEVVSFSVFDRNSPL LNLLYHDNSITTNGEESKCESMFNPENERVITKSDDFCIGSYKCSRVFPSNSHHLIGFVLTLVDSAFVSTGNESERSKTKSILLVGKLDSWGIQWVSLVK LTQSVHVDYVSEWADFCFSDNLLVCLNASGLIYFYAAMSGELVAYVDILQASGLNPHSVLWQQEKMTMAADFQIKQVEEVHDKSTSQCVDLLGKGMFRKL LTGSHTSFLAVVDEYGVVYVMRTGDYFSNNSYACDKLLPHFQHLGLGILAGWKVGGSDIGHQWVYSNDPSTRNEKVFFLDYAGKNALHKIQISNCHGCED LMNGFSEIATHTFHDSEVCSHLMRKVFLPTNRSSEDDYICFSPMGVTRLIKKHDAKSQSTTQLVHFNMHTSSAVLDDRCLNTRVNMSYSQGKGEASFGEA VGCTFQGFFYLVTEVGLSVVLPSFSATSDFLPVETIGYQQHLINTDIGWRARRMLEIRESIEPFSPWKVEVLDRVLLYDGPAEADHLCLTNGWELKISRL WWLQMALEYLKYDEIERSLEMLVSINLAEEGILRLLFAAAYLMSHRNSNDNEVSAASRLLALASHFTTKMIRKCGLLQHKKDAYVLPGFGMIPLLSLPPV LPHKLQNEMGDSRSLHDMAHLLEIIRNLQSGLSSKLKNTGVGLVDGREELSLVEANLSQDESQLSILSADATSSDTPNQQELLVSASSVVSNNEKLALMH RDSLDIEDSNGVSVLVPQGGDWGKNVFPSENPKEMIARWKMDNLDVKTVVKDALLSGRLPLAVLQLHLHRSRDSETNKEPPDTFSEVRDIGRAIAYDLFL KGETELAVATLQRLGEDVETCLKQLLFGTVRRSLQLQVAEDMRRYGYLGPYEWETLEKILIIERLYPSSSFWRTFVGRQKALKRATSTLNSPGQIKLQLL PSYLFSNLIIECGEIDGVVLGSWTSINGNSPDPVVDEDTAHAGYWAAAAAWSSAWDQRTIDRIVLDQPFLMGVHVLWESQLEYYLCHNDCEEVSKLLYLI PTSVLSDGSLQITLDNLQHAPEVGCNREIPEYNSYICSIEELDSACIDIPGVKIFRFPANAFCSMWLRMLMEQELAKKFIFLKEYWEDTAEIVALLARSG IITSRSDKMTLEDYSVEASSDLNITDDAVPMEALHKLLLHYCVQYNLPNLLDLYLDHCKLVLDNDSLGSLQETAGDCQWAKWLLLSRIKGHEYNASFSNA RTIMSPNIVSDSNLNVLEIDEIIHTVDDIAEGGGEMAALATLMYAPDPIQNCLSSGSVKRHGSSSAQCTLENLRPTLQRFPTLWRTLVAASFGHDTTSNF LGPKGNNALADYLNWRDNIFFSTTHDTSLLQMLPYWFPKTVRRLIQLYIQGPLGWQSVSGLPTADTLLYRDFDFFMHSDENTELNAVYWEATIQKHVQEE LYDSSLEETKLGLEHHLHCGRTLAAFNHILSVRVQKLKLEGQSVALSHGQQNFQSDVQALLAPLTQSEEAVLSSVIPLGVAHFEDSVLVASCAFLLELCG LSASILHVDVSALRRVSSFYKLSENNERYSQISPKGKGSALHVVSREGNVVESLARSLADEYLHNDCVTNTKLKGTSNSFIGKQSSRVPMLVLQHLEKAS LPIMMDGKTCGSWLLTGSGDGTELRDQQKVASQHWNLVTAFCQMHQLPLSTKYLAVLARDNDWVGFLSEAQIGGYPFDTVVEVATKEFSDPRLKIHILTV LKGMQSRKKSGSPAYSDTGESGSETYCFQEDILIPAELFRILADCEKQKNPGESLLKKAKEMSWSILALIASCFPDVSPLSCLTVWLEITAARETSSIKV NDIASQIANNVGAAVEAINSLPAGSRVLTVHYNRHNAKRRRLMEPIYVDVLTTYGGPTRSVAQGTVAEDERRVDVRESVNVSSDSGQGPVSLSKMVAVLC EQLLFLPLLRAFEMFLPSCSLLPFIRSLQAFSQMRLSEASAHLSSFSVRIKDEQSSMQANIGIEGQVRTSWISSTAVKAANAMLVTCPSPYEKRCLLQLL AATDFGDGGSAATYYRRLYWKINLAEPSLRKDDTVHLGNQALDDDSLLEALEKNGHWEQARNWARQLDASGGPWKSSVHHVTEIQAESMVAEWKEFLWDV PEERVALWGHCQTLFVRYSFPPLQAGLFFLKHAEAVEKDLPARELHELLLLSLQWLSGMITLSNPVYPVPLLREIETRVWLLAVESEAQAKSDRDFTSTT LSRDPLIGNTSTIIDRTASLITKMDNHINTMRSRTIEKQDARENNLTQHKNQVLDSITQTTGSSTKPKRRAKGNALSRRPLMDPIDKNTEPEDFSTNLFS RGDLLLPDENLKIEMSFSKWEERVGPAELERAVLSLLEFAQITASKQLQYKLSPAHTPHEFILVDVTLKLATISTPGSKISISMLDEEVRSVVKSHNILT EQHLVDPLQMHGLEFFTMPMKILEKLVTVFTEGSGRGLCKRIIAVVKAANVLGLSFLEAFDKQPIDLLQLLALKAQESFEQASLIVQTHSMPAASIAQIL AESFLKGLLAAHRGGYMDSQKEEGPAPLLWRFSDFLKWAELCPSEPEIGHALMRLVITGKEIPHACEVELLILSHHFYKSSACLDGVDVLVSLAATRVEA YVSEGDFPCLARLITGVGNFHVLNFILGILIENGQLDLLLQKYSAAAETNVEAAEAVRGFRMAVLTSLKHFNPKDHDAFAMVYNHFDMKHETAALFESRA WQSSEQWFHRYDKDQNEDLLESMRYFIEAAGVHSSIDAGNKTRRACAHASLVSLQIRMPDCKWLNLSETNARRLLVEQSRFQEALIVAEAYGLNQPSEWA LVLWNQMLKPELTEEFVAEFVAVLPLQPSMLVELARFYRAEVAARGDQSQFSVWLTGGGLPAEWAKYLERSFRCLLKRTRDLRLRVQLATTATGFSDILD VCMKALDKVPDNAAPLVLRKGHGGAYLPLM

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G39420			unknown protein		Potri.007G078650 [exp]	0	1
AT3G17740			unknown protein		Potri.015G033300 [exp]	2.00	0.9141
AT3G01720			unknown protein		Potri.001G336400 [exp]	2.82	0.8717
AT2G15900			Phox-associated domain;Phox-li...		Potri.009G108300 [exp]	4.24	0.8776
AT1G50030		TOR	target of rapamycin (.1.2)		Potri.004G147800 [exp]	5.65	0.8865
AT3G10650		AtNUP1	unknown protein		Potri.008G014800 [exp]	6.32	0.8776
AT1G13040			Pentatricopeptide repeat (PPR-...		Potri.008G185000 [exp]	6.48	0.8719
AT3G24180			Beta-glucosidase, GBA2 type fa...		Potri.003G178000 [exp]	7.21	0.8495
					Potri.002G124250 [exp]	8.12	0.8459
AT4G38600		UPL3, KAK	UBIQUITIN-PROTEIN LIGASE 3, KA...		Potri.004G174700 [exp]	8.94	0.8536
AT3G48470		EMB2423	embryo defective 2423 (.1)		Potri.015G090700 [exp]	9.16	0.8483

Compare expression of checked genes

Potri.007G078650 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.