Plant FIBer expression Database

Potri.007G091700 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT5G10190 661 / 0 Major facilitator superfamily protein (.1)
AT1G78130 658 / 0 UNE2 unfertilized embryo sac 2, Major facilitator superfamily protein (.1)
AT4G36790 365 / 1e-121 Major facilitator superfamily protein (.1)
AT2G18590 292 / 2e-93 Major facilitator superfamily protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.007G091800
[exp]
767 / 0 AT5G10190 643 / 0.0 Major facilitator superfamily protein (.1)
Potri.007G030800
[exp]
336 / 5e-110 AT4G36790 633 / 0.0 Major facilitator superfamily protein (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10038972
[exp]
697 / 0 AT5G10190 720 / 0.0 Major facilitator superfamily protein (.1)
Lus10027264
[exp]
333 / 1e-112 AT5G10190 337 / 1e-114 Major facilitator superfamily protein (.1)
Lus10026037
[exp]
327 / 8e-107 AT4G36790 639 / 0.0 Major facilitator superfamily protein (.1)
Lus10041712
[exp]
318 / 9e-104 AT4G36790 663 / 0.0 Major facilitator superfamily protein (.1)
Lus10027265
[exp]
123 / 3e-33 AT5G10190 129 / 3e-36 Major facilitator superfamily protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0015 MFS PF03137 OATP Organic Anion Transporter Polypeptide (OATP) family
Representative CDS sequence
>Potri.007G091700.1 pacid=42766528 polypeptide=Potri.007G091700.1.p locus=Potri.007G091700 ID=Potri.007G091700.1.v4.1 annot-version=v4.1
ATGAAACAAGAGGCACTAACATTGGTACTGGTGAATTTTGCGGGGATTATGCAGAGAGCTGATGAGTCTTTGTTGCCGGGAGTGTATAAAGAAGTTGGTG
CAGCTCTACATACAGACCCAACTGGGCTGGGTTCACTCACTTTGTTTAGATCAGTAGTTCAGTCTTCTTGCTACCCATTAGCAGCTTACCTTGCTGTGCA
TCATAATCGTGCCCATGTCATTGCTCTTGGTGCTTTTCTTTGGGCTGCTGCCACCTTCCTTGTTGCCATATCCTCTACATTCTTACAGGTGGCAATTTCA
AGAGGTCTAAATGGGATCGGACTTGCCATAGTCATACCTGCCATTCAGTCTCTTGTTGCCGATTCGACCGATGAAAGCAATCGCGGTATGGCATTTGGAT
GGCTCCAGCTAACAGGAAACCTTGGCTCCATCATTGGAAATCTCTGTTCGGTACTACTAGCCACAACATCGTTCATGGGGATAGCTGGTTGGAGAGTTTC
TTTCCATTTGGTTGGAATAATAAGTGTAATAGTTGGTGTTTTGGTCTATCTCTTTGCCAAGGATCCACACTTCTCCGATACTGATGGTAGAGCTAAAGAT
AAAACTCCTCAGACTTTTATTTCAGAGTTCAAGGACCTGATCAAAGATGCGAAGTCAGTTGTAAAAATACCAACCTTCCAAATACTTGTTGCTCAAGGTG
TCTCTGGAACATTTCCTTGGTCAGGTTTATCATTCGCTCCTATGTGGTTAGAGCTTATTGGATTCTCTCATAAACAAACAGCATCCCTCCTGAACATTTT
TGTAATCGGTGGTTCATTCGGTAGTCTGTTTGGAGGAAGAATGGGGGATATCCTTGCTAAACGCTTGCCTAATTCTGGGAGAATAATGCTATCACAGATA
AGTGCTGGTTCAAGCATTCCTTTAGCAGGGATTTTGCTTCTGGTGTTGCCATATGATCCATCAACAGCATTCAAGCATGGTCTGGTCTTTTTCACAATGG
GACTCTGCACATCCTGGAATGCTCCAGCTACAAACAATCCAATATTTGCAGAGATAGTGCCAGAGAGATCTCGAACAACAATCTATGCTTTGGATAATTC
ATTTGAGTCCGTACTGTCTTCTTTTGCTCCCCCAATAGTTGGCATTTTGGCTCAGCGCTTATATGGCTACAAAGTTCCCAAAACATCATCGGATTCTGTC
AAAGTTGAAACAGATAGAGAAAATGCTGAATCACTTGCCAAGGCACTCTTCATGTCATTTGTCATTCCAATGTCAATATGTGTTTTCATCTACTCCTTCC
TCTACTGGTCGTATCCAAGAGACCGGGAGCGGGCAAAGATGAATGCGTTGATAGAATCAGAAATGCAACAAGTAGAGGCACAGGATTCTCCTCTCGGAGA
AGAATACTCTCAACTACATCTTTCAGAATCAAAAGGGCTTGATGGAAAGGAAACAGCAGAAACTGATGTAGAATATGGAAAAATCGATAGGTTGGATTTC
GATGATGATAGCGACGACAAGGCTCTACTTTCAATAAACTAA
AA sequence
>Potri.007G091700.1 pacid=42766528 polypeptide=Potri.007G091700.1.p locus=Potri.007G091700 ID=Potri.007G091700.1.v4.1 annot-version=v4.1
MKQEALTLVLVNFAGIMQRADESLLPGVYKEVGAALHTDPTGLGSLTLFRSVVQSSCYPLAAYLAVHHNRAHVIALGAFLWAAATFLVAISSTFLQVAIS
RGLNGIGLAIVIPAIQSLVADSTDESNRGMAFGWLQLTGNLGSIIGNLCSVLLATTSFMGIAGWRVSFHLVGIISVIVGVLVYLFAKDPHFSDTDGRAKD
KTPQTFISEFKDLIKDAKSVVKIPTFQILVAQGVSGTFPWSGLSFAPMWLELIGFSHKQTASLLNIFVIGGSFGSLFGGRMGDILAKRLPNSGRIMLSQI
SAGSSIPLAGILLLVLPYDPSTAFKHGLVFFTMGLCTSWNAPATNNPIFAEIVPERSRTTIYALDNSFESVLSSFAPPIVGILAQRLYGYKVPKTSSDSV
KVETDRENAESLAKALFMSFVIPMSICVFIYSFLYWSYPRDRERAKMNALIESEMQQVEAQDSPLGEEYSQLHLSESKGLDGKETAETDVEYGKIDRLDF
DDDSDDKALLSIN

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT5G10190 Major facilitator superfamily ... Potri.007G091700
[exp]
0 1
AT1G64480 CBL8 calcineurin B-like protein 8 (... Potri.001G090200
[exp]
4.47 0.9318
AT2G21045 Rhodanese/Cell cycle control p... Potri.014G131300
[exp]
6.48 0.9539
AT5G39970 catalytics (.1) Potri.017G075800
[exp]
6.70 0.9564
AT2G29120 ATGLR2.7 GLUTAMATE RECEPTOR 2.7, gluta... Potri.014G028500
[exp]
6.78 0.9563
AT3G19000 2-oxoglutarate (2OG) and Fe(II... Potri.012G069200
[exp]
9.38 0.9519
AT5G07010 ATST2A ARABIDOPSIS THALIANA SULFOTRAN... Potri.001G036700
[exp]
15.29 0.9448
AT5G22860 Serine carboxypeptidase S28 fa... Potri.010G232300
[exp]
17.23 0.9405
AT2G01340 At17.1 unknown protein Potri.010G113800
[exp]
18.11 0.9205
AT1G14920 GRAS RGA2, GAI RESTORATION ON GROWTH ON AMMON... Potri.016G027800
[exp]
18.16 0.9502
AT4G14746 unknown protein Potri.005G051900
[exp]
20.00 0.9431

Potri.007G091700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.