Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ZOG1.9
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43840 461 / 1e-160 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G43820 451 / 2e-156 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT1G05680 393 / 1e-133 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 392 / 3e-133 UDP-Glycosyltransferase superfamily protein (.1) AT2G31790 369 / 2e-124 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 347 / 9e-116 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 345 / 6e-115 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G15480 271 / 6e-86 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT3G21560 269 / 9e-85 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT4G15490 266 / 4e-84 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140600 [exp] 723 / 0 AT2G43840 375 / 2e-127 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140500 [exp] 578 / 0 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.014G175000 [exp] 457 / 7e-159 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.001G389200 [exp] 450 / 7e-156 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 439 / 8e-152 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032500 [exp] 418 / 2e-143 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 413 / 2e-141 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 411 / 7e-141 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.017G032700 [exp] 410 / 3e-140 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020556 [exp] 506 / 4e-178 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10009412 [exp] 500 / 9e-176 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 483 / 1e-168 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10020559 [exp] 473 / 2e-164 AT2G43820 436 / 3e-150 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 440 / 6e-152 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 433 / 4e-149 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006353 [exp] 414 / 2e-141 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 405 / 3e-138 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10006721 [exp] 402 / 3e-137 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10024486 [exp] 385 / 3e-130 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.007G117200.1 pacid=42764865 polypeptide=Potri.007G117200.1.p locus=Potri.007G117200 ID=Potri.007G117200.1.v4.1 annot-version=v4.1 ATGGAAAAGATGGTCAATAGGAGCCATGTGCTAGTAGTTCCACTGCCAGGCGCAGGCCACATAAATCCCATGCTGCAATTCTCTAGGCGTTTGGTCTCCA AAGGGCTCAAAGTCACCTTCGTAATCACCGAATTCATATCCAAGTCTAGGCAGCTTGGCTCATCAATTGGTTCCATTCAACTTGATACCATATCAGATGG CTATGATGATGGATTTAATCAAGCTGGTAGCAGGGAACCCTATCTTTCAAGCCTACATGATGTTGGTCCAAAAACCCTATCAGATCTCATCAAGAGATAC CAAACCTCTTCAATCCCTATCCATGCTGTAATATACGAGCCTTTCTTGGCTTGGGCTCTGGATGTGGCAAAGGATTTCGGGTTATTTGCAGCTGCTTTTT TTACACATGCTTGTGCTGTTGATTACATTTTTTACAATGTCTACCATGAAGTGTTAAGGGTGCCAGTTTCTTCAACCCCTGTGTTGATTGAGGGATTACC ACTACTGCTTGAGCTTCAAGACTTGCCAACATTTGTTGTTCTGCCAGATTCATACCCTGCTAATGTTAAGATGACCATGAGTCAGTTTGCTAATTTGGAC AAGGCTGATTGGATCCTCATCAACACTTTCTACAAGCTGGAGTGTGAGGTAGTGGATACAATGTCAAAAGTTTGTCCATTATTGACAATTGGACCAACAA TCCCATCAATATACTTGGACAAGAGTATTGAAGATGAGGATGACTACGGTATTAGTCTATGTGAAATAGACGCATCTCTTTCTATCAATTGGCTCAGCAG TAAGCCCACTGCATCAGTTGTATATGTGTCTTTTGGTAGCTGTGCTACTCTAAGCAGCAAGCAAATGGAGGAAATTGCGTGGGGCTTAAAGAGGAGCAAT TTTCACTTCTTGTGGGTGGTGATGGATTCCGAGAAAGAGAAGATTCCAGAAGGGTTTGTTGAAGAAGTGGAGAATAAGGGATTGGTAGTGAATTGGAGTC CCCAAGTGAAAGTGCTAGCAAATGAGGCTGTGGGATGTTTTTTCACACATTGCGGTTGGAACTCAACAATCGAGGCATTGAGCTTGGGTGTGCCAATGGT GACAATGCCAGGATGGAGTGATCAACAAACGAATTCTAAACTCGTTGAAGATGCTTGGAAGGTGGGAGTCAGAGCTAAAGTTGATGAGCATGGAATTGTG AGAAGAGAAGAGATTGCCCTTTGCATAAAAGAAGTGATGGAGGGAGATACAGGCAGAGAAATGAAAATGAATTCCAAGAAATGGAAAGAGCTGGCAATCG AGGCTGCGAGCGAAGGTGGAACTTCTGATACTAACATTAATGAACTGGTAGCTATGTTGAGAAGCACCAAATGA
AA sequence Show only first row Show all	>Potri.007G117200.1 pacid=42764865 polypeptide=Potri.007G117200.1.p locus=Potri.007G117200 ID=Potri.007G117200.1.v4.1 annot-version=v4.1 MEKMVNRSHVLVVPLPGAGHINPMLQFSRRLVSKGLKVTFVITEFISKSRQLGSSIGSIQLDTISDGYDDGFNQAGSREPYLSSLHDVGPKTLSDLIKRY QTSSIPIHAVIYEPFLAWALDVAKDFGLFAAAFFTHACAVDYIFYNVYHEVLRVPVSSTPVLIEGLPLLLELQDLPTFVVLPDSYPANVKMTMSQFANLD KADWILINTFYKLECEVVDTMSKVCPLLTIGPTIPSIYLDKSIEDEDDYGISLCEIDASLSINWLSSKPTASVVYVSFGSCATLSSKQMEEIAWGLKRSN FHFLWVVMDSEKEKIPEGFVEEVENKGLVVNWSPQVKVLANEAVGCFFTHCGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAKVDEHGIV RREEIALCIKEVMEGDTGREMKMNSKKWKELAIEAASEGGTSDTNINELVAMLRSTK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G43840		UGT74F1	UDP-glycosyltransferase 74 F1 ...		Potri.007G117200 [exp]	0	1	Pt-ZOG1.9
AT1G52827		ATCDT1	cadmium tolerance 1 (.1)		Potri.001G177366 [exp]	2.00	0.9566
AT4G35760			NAD(P)H dehydrogenase (quinone...		Potri.005G106500 [exp]	3.46	0.9490
AT5G52420			unknown protein		Potri.015G146400 [exp]	4.00	0.9575
AT5G43260			chaperone protein dnaJ-related...		Potri.003G171800 [exp]	5.29	0.9529
AT1G33270			Acyl transferase/acyl hydrolas...		Potri.001G209500 [exp]	7.41	0.9490
AT4G13430		ATLEUC1, IIL1	isopropyl malate isomerase lar...		Potri.010G065100 [exp]	8.48	0.9508
AT5G15802			unknown protein		Potri.017G099600 [exp]	12.48	0.9486
AT4G34730			ribosome-binding factor A fami...		Potri.004G164200 [exp]	14.14	0.9520
AT1G06110		SKIP16	SKP1/ASK-interacting protein 1...		Potri.015G078100 [exp]	15.29	0.9496
AT1G22850			SNARE associated Golgi protein...		Potri.019G071900 [exp]	17.14	0.9557

Compare expression of checked genes

Potri.007G117200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.