Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43840 463 / 3e-161 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G43820 462 / 6e-161 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT1G05680 398 / 9e-136 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 394 / 3e-134 UDP-Glycosyltransferase superfamily protein (.1) AT2G31790 368 / 6e-124 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 357 / 1e-119 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 346 / 4e-115 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G15490 281 / 7e-90 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT1G05560 280 / 3e-89 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G15480 280 / 4e-89 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G117200 [exp] 552 / 0 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.014G175000 [exp] 461 / 2e-160 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140600 [exp] 448 / 4e-156 AT2G43840 375 / 2e-127 UDP-glycosyltransferase 74 F1 (.1.2) Potri.001G389200 [exp] 441 / 3e-152 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 431 / 2e-148 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.017G032300 [exp] 426 / 2e-146 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G140300 [exp] 414 / 6e-142 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 413 / 2e-141 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 405 / 2e-138 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020556 [exp] 588 / 0 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10009412 [exp] 585 / 0 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020559 [exp] 522 / 0 AT2G43820 436 / 3e-150 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 470 / 9e-164 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006353 [exp] 438 / 3e-151 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 428 / 2e-147 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10010712 [exp] 422 / 4e-145 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10024486 [exp] 402 / 3e-137 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006352 [exp] 397 / 3e-135 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10017825 [exp] 393 / 1e-133 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.007G140500.1 pacid=42765649 polypeptide=Potri.007G140500.1.p locus=Potri.007G140500 ID=Potri.007G140500.1.v4.1 annot-version=v4.1 ATGGAGGAGTCATGGAAAGGGCATGTACTACTAGTTCCATATCCAGGCCAAGGCCATATAAATCCCATGATGCAATTCTCAAGGCGTTTGATCTCCAAAG GGCTCAAAGCCACTCTTGTAACATCCATTTTCATTGCCAAGTCTATGAAGCTCGGCTCCTCAATCGGCCCTGTCCATCTTGATGTAATTTCTGACGGTTT TGATGAAGAAGGCTTTCCAACAGGTGGTTCTAGTGAACTCTATCTCCAAAAGCTAGAGGCAGCAGGTTCAAAAACCCTAGCTGAACTTATTGTCAAGTAT CGAGGCACACCATACCCTATTGTTTGTGTCATCTATGAGCCTTTCTTGCATTGGGCCTTGGATGTTGCTAAGGATTTCGGGGTCATGGGAGCTGCCTTTT TCACTCAACCTTGTGTTGTTGATTATATTTATTACAACATTCAGCATGGATTGCTGAGTTTGCCAATTACTTCAGCACCTGTTTCCATTCCTGGATTGCC TCTGCTTGAGTCTCGAGACATGCCATCCTTCATTAACGTCCCTGGCTCGTATCCTGCTTACTTCAAGATGTTGCTGGATCAGTTTTCCAATACAGACAAA GTTGATTACATTCTTATCAACACTTTCTACAAGCTAGAGGCTGAGGCAGTGGATACAATATCAAAAGTCTGCCCAACATTGACAATTGGACCAACAGTTC CATCAAGATACTTGGACAAGCGTATTGAAGATGATGATTACTATAATCTTGATCTCTTTACATTACACGCATCTATTTCCACCAATTGGATCAGCAATAA ACCACCAAGGTCAGTTGTATATGTGGCCTTTGGTAGCATTTCTAACCTATGTGAGAAGCAAATTGAAGAACTTTCTTGGGGCTTAAAGAATAGTAATTAC TATTTCTTGTGGGTAATAAGGGAATCTGGGCAAATCAATCTCCCCAAAACATTTTTGGAGGACTTAGGTGAAAAGGGTTGTGTGGTGGGGTGGAGTCCTC AAGTTAGGATGCTAGCAAACGAAGCTGTGGGATGTTTTCTTACACATTGCGGTTGGAACTCGACAATTGAGGCATTGAGTCTTGGCATGCCAATGGTGGC AATGCCACAGTGGACTGACCAGCCACCAAACGCCAAGCTGGTAGAGGATGTTTGGAAGGTGGGAATTAGAGTTAAGGTTAATGAGGAAGGAATTGTGCCA AGAGATGAGATTGAGTGTTGTATTAAGGAAGTGATGGAGGGAGAGAAGGGCGAAGAGATGAAAAAGAATGCAAAGAAATGGAGAGAGTTGGCTATTGAGG CTGTTAGTGAAGGTGGTTCTTCGGACAAGAACATTGATGAATTGGTATCTAAGATTCTAAAATTCAAGAATTGA
AA sequence Show only first row Show all	>Potri.007G140500.1 pacid=42765649 polypeptide=Potri.007G140500.1.p locus=Potri.007G140500 ID=Potri.007G140500.1.v4.1 annot-version=v4.1 MEESWKGHVLLVPYPGQGHINPMMQFSRRLISKGLKATLVTSIFIAKSMKLGSSIGPVHLDVISDGFDEEGFPTGGSSELYLQKLEAAGSKTLAELIVKY RGTPYPIVCVIYEPFLHWALDVAKDFGVMGAAFFTQPCVVDYIYYNIQHGLLSLPITSAPVSIPGLPLLESRDMPSFINVPGSYPAYFKMLLDQFSNTDK VDYILINTFYKLEAEAVDTISKVCPTLTIGPTVPSRYLDKRIEDDDYYNLDLFTLHASISTNWISNKPPRSVVYVAFGSISNLCEKQIEELSWGLKNSNY YFLWVIRESGQINLPKTFLEDLGEKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVEDVWKVGIRVKVNEEGIVP RDEIECCIKEVMEGEKGEEMKKNAKKWRELAIEAVSEGGSSDKNIDELVSKILKFKN

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G43840		UGT74F1	UDP-glycosyltransferase 74 F1 ...		Potri.007G140500 [exp]	0	1
AT1G61560		ATMLO6, MLO6	MILDEW RESISTANCE LOCUS O 6, S...		Potri.008G041400 [exp]	3.31	0.9702	Pt-MLO12.2
AT1G76520			Auxin efflux carrier family pr...		Potri.001G456400 [exp]	4.24	0.9576
AT3G07040		RPS3, RPM1	RESISTANCE TO PSEUDOMONAS SYRI...		Potri.001G134500 [exp]	5.47	0.9659
AT1G07650			Leucine-rich repeat transmembr...		Potri.019G007900 [exp]	7.00	0.9629
AT1G68380			Core-2/I-branching beta-1,6-N-...		Potri.008G123500 [exp]	7.48	0.9695
AT3G21150	CO	EIP6, BBX32	EMF1-Interacting Protein 1, B-...		Potri.008G007000 [exp]	7.61	0.9525
AT2G29460		GST22, ATGSTU4	GLUTATHIONE S-TRANSFERASE 22, ...		Potri.015G042000 [exp]	9.59	0.9559
AT1G14870		AtPCR2, PCR2	PLANT CADMIUM RESISTANCE 2 (.1...		Potri.010G109100 [exp]	10.67	0.9570
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Potri.004G025200 [exp]	12.12	0.9439
					Potri.001G131600 [exp]	13.00	0.9594

Compare expression of checked genes

Potri.007G140500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.