Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G02600 614 / 0 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 574 / 0 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G24250 435 / 2e-149 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G33670 366 / 5e-122 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G11310 343 / 2e-112 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G42560 340 / 2e-112 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT1G61560 342 / 1e-111 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G17430 340 / 1e-111 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G39200 340 / 5e-111 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G26700 332 / 2e-108 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G000800 [exp] 788 / 0 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 784 / 0 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 603 / 0 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.001G078800 [exp] 471 / 2e-163 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 360 / 2e-119 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 360 / 6e-119 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.009G011900 [exp] 361 / 9e-119 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064300 [exp] 360 / 1e-118 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.002G006700 [exp] 358 / 2e-118 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008340 [exp] 630 / 0 AT4G02600 576 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10027093 [exp] 625 / 0 AT4G02600 580 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10001336 [exp] 572 / 0 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10026276 [exp] 464 / 5e-160 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 359 / 2e-119 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 360 / 2e-118 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 360 / 2e-118 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 354 / 5e-116 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 350 / 3e-114 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 337 / 2e-110 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [poplar] [flax] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Potri.007G146900.2 pacid=42766214 polypeptide=Potri.007G146900.2.p locus=Potri.007G146900 ID=Potri.007G146900.2.v4.1 annot-version=v4.1 ATGGCAGAAGGAGGGACAACCTTAGAGTACACTCCCACATGGGTTGTGGCAGCGGTTTGCTCTGCTATTGTTCTCATTTCTCTTATTGTTGAAAGATTCC TTCACCTCCTTGGCAAGTTATTGAAGAGAAAACACCAGAAACCGCTCTTTGAAGCCTTACAGAAAATCAAAGAAGAGTTGATGCTTTTGGGGTTTATATC ACTGCTACTGACAGTGTTCCAAGGCAGAATTAACACTATCTGCATTTCTGAGGATTTGTCTAAGAAAATGCTGCCCTGCAAGAAAGAAACTAAAGGAACT ACTGCCCACTTCCAGGCTTTCTTTTCCTTCTTTCCTGGTGGGACTTCCCGACGCCTATTAGCCGAGGACTCCCCCGCTAATTCTTGTCCCGAGGGAAAGG TTCCTATGTTATCTACAACAGCACTGCATCATCTTCATATATTTATCTTCGTGCTTGCTTGTGTGCATGTGGTTTTCTGTGCTCTAACCATTCTTTTCGG AAGTGCTAAGATAAGGCAGTGGAAACGTTGGGAGGATTCTATCTCGAACAAGGAACAAGATCCAGAACAAGCTCAAGATCCAAAGCTTACGAATGTTCAA GACCATGATTTTATCAAGACACGCTATCTGGGTTTTGGAAAGAATTCTTACTTTCTGGGTTGGGTGCAATCATTTTTCAAGCAGTTCTATGGATCGGTAA CAAGATCTGATTATATCACATTGCGACTTGGCTTCATTATGACTCATTGCAGGGGAAACCTAAAGTTTAATTTTCACAAATACATGATGCGAGCCCTTGA AGCTGACTTTAAGAAAGTTGTTGGAATAAGTTGGTATCTTTGGTTATTTGTGGTTCTTTTCTTGTTGCTGAATGTTGCTGGCTGGCATGCATATTTCTGG ATTGCATTCATACCCTTCATTCTTCTACTAGCCGTGGGAACTAAGTTGGAGCATGTAATCTCTCAGTTGGCCCATGAGGTCGCCGAGAAACATGTAGCAG TCCAAGGGGATTTGGTTGTTCATCCTTCAGATGATCACTTCTGGTTCAACAAGCCTAAAATCGTTCTTATTTTGATCCACATCATTTTATTCCAAAACTC TTTCGAAATGGCATTTTTCTTCTGGATATGGCTACAATATGGTTTCGACTCCTGCATAATGGGACAAGTTAGTTATATTATTCCAAGACTCGTTATAGGG GCATTCATTCAGTTGCTCTGCAGTTACAGTACCCTACCACTCTATGCAATTGTGACACAGATGGGAAGTTCATTTAAGAAAGCAATATTTGATGAACATG TTCAAGAAGGGCTTGTGGGTTGGGCTAAGCAAGCAAAAAAGAAGACAGTGTTGAGAAAGGCTGCAAATGAATCTACCCATAACCAAGTCGTTCACAGAGA GGAGTCTCCTCTGATTCAGATGGCAAAGGCTGGATCAAAGTAG
AA sequence Show only first row Show all	>Potri.007G146900.2 pacid=42766214 polypeptide=Potri.007G146900.2.p locus=Potri.007G146900 ID=Potri.007G146900.2.v4.1 annot-version=v4.1 MAEGGTTLEYTPTWVVAAVCSAIVLISLIVERFLHLLGKLLKRKHQKPLFEALQKIKEELMLLGFISLLLTVFQGRINTICISEDLSKKMLPCKKETKGT TAHFQAFFSFFPGGTSRRLLAEDSPANSCPEGKVPMLSTTALHHLHIFIFVLACVHVVFCALTILFGSAKIRQWKRWEDSISNKEQDPEQAQDPKLTNVQ DHDFIKTRYLGFGKNSYFLGWVQSFFKQFYGSVTRSDYITLRLGFIMTHCRGNLKFNFHKYMMRALEADFKKVVGISWYLWLFVVLFLLLNVAGWHAYFW IAFIPFILLLAVGTKLEHVISQLAHEVAEKHVAVQGDLVVHPSDDHFWFNKPKIVLILIHIILFQNSFEMAFFFWIWLQYGFDSCIMGQVSYIIPRLVIG AFIQLLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQEGLVGWAKQAKKKTVLRKAANESTHNQVVHREESPLIQMAKAGSK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G02600		MLO1, ATMLO1	MILDEW RESISTANCE LOCUS O 1, S...		Potri.007G146900 [exp]	0	1
AT1G09160			Protein phosphatase 2C family ...		Potri.005G021200 [exp]	6.78	0.8716
AT5G57410			Afadin/alpha-actinin-binding p...		Potri.018G092000 [exp]	14.83	0.8313
AT4G24780			Pectin lyase-like superfamily ...		Potri.001G339500 [exp]	15.29	0.8205
AT1G10200	LIM	WLIM1, SF3	WLIM1, GATA type zinc finger t...		Potri.002G118000 [exp]	22.58	0.8515
AT1G76670			Nucleotide-sugar transporter f...		Potri.002G000500 [exp]	23.68	0.8498
AT5G16490		RIC4	ROP-interactive CRIB motif-con...		Potri.014G147000 [exp]	25.69	0.8468	Pt-RIC2.1
AT3G07880		SCN1	SUPERCENTIPEDE1, Immunoglobuli...		Potri.006G010500 [exp]	32.40	0.8225	Pt-GDI1.1
AT1G02180			ferredoxin-related (.1)		Potri.006G220700 [exp]	33.54	0.8346
AT3G06720		IMPA1, IMPA-1, ...	importin alpha isoform 1 (.1.2...		Potri.014G124200 [exp]	34.98	0.8328
AT1G48480		RKL1	receptor-like kinase 1 (.1)		Potri.015G035500 [exp]	45.67	0.8321

Compare expression of checked genes

Potri.007G146900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.