Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G24910 486 / 4e-168 ELA1, CYP714A1 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) AT5G24900 446 / 1e-152 ELA2, CYP714A2 EUI-like p450 A2, cytochrome P450, family 714, subfamily A, polypeptide 2 (.1) AT2G26710 346 / 2e-113 CYP72B1, CYP734A1, BAS1 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) AT5G38450 305 / 2e-97 CYP735A1 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) AT3G14690 302 / 9e-97 CYP72A15 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1) AT3G14640 298 / 2e-95 CYP72A10 "cytochrome P450, family 72, subfamily A, polypeptide 10", cytochrome P450, family 72, subfamily A, polypeptide 10 (.1) AT3G14630 297 / 1e-94 CYP72A9 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) AT1G67110 296 / 2e-94 CYP735A2 "cytochrome P450, family 735, subfamily A, polypeptide 2", cytochrome P450, family 735, subfamily A, polypeptide 2 (.1) AT4G27710 296 / 2e-94 CYP709B3 "cytochrome P450, family 709, subfamily B, polypeptide 3", cytochrome P450, family 709, subfamily B, polypeptide 3 (.1) AT2G46950 296 / 8e-94 CYP709B2 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G026200 [exp] 1010 / 0 AT5G24910 488 / 8e-169 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.013G160800 [exp] 680 / 0 AT5G24910 468 / 6e-161 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.019G064200 [exp] 508 / 4e-177 AT5G24910 652 / 0.0 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.010G116300 [exp] 486 / 2e-168 AT5G24910 376 / 3e-125 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.017G114200 [exp] 348 / 1e-114 AT5G38450 724 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Potri.004G100400 [exp] 340 / 4e-111 AT5G38450 734 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Potri.006G154500 [exp] 335 / 4e-109 AT2G26710 789 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.018G070900 [exp] 327 / 3e-106 AT2G26710 796 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.015G145100 [exp] 326 / 8e-106 AT5G52400 646 / 0.0 "cytochrome P450, family 715, subfamily A, polypeptide 1", cytochrome P450, family 715, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008423 [exp] 509 / 2e-177 AT5G24910 462 / 9e-159 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Lus10033044 [exp] 340 / 8e-111 AT2G26710 803 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10017775 [exp] 326 / 2e-104 AT3G14630 359 / 2e-117 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) Lus10033555 [exp] 322 / 3e-104 AT5G38450 694 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Lus10039234 [exp] 322 / 4e-104 AT5G52400 653 / 0.0 "cytochrome P450, family 715, subfamily A, polypeptide 1", cytochrome P450, family 715, subfamily A, polypeptide 1 (.1) Lus10026085 [exp] 320 / 1e-103 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10017595 [exp] 317 / 5e-102 AT5G38450 697 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Lus10026084 [exp] 311 / 4e-100 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10017771 [exp] 308 / 3e-99 AT2G26710 705 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10042487 [exp] 301 / 7e-96 AT3G14690 604 / 0.0 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.008G026300.1 pacid=42807065 polypeptide=Potri.008G026300.1.p locus=Potri.008G026300 ID=Potri.008G026300.1.v4.1 annot-version=v4.1 ATGGAGCTGCTGCTGCTGCTGCTGCCCAAGGTCACAGTTGCCGTTGCTCTTATCGGCCTTGTCAGCATTGTCATACGGATGTGTGATGCTCTAATATTCA AGCCAGAAAAGCTTCGTTCGAAGCTACGAAATCAAGGTATCCGAGGTCCACCGCCTGCATTTTTGCTTGGAAACATACGGGACATTAAGAAGGCACGATC TAAGGTCTCAAAAGCATCACGGGAAGGAGAACAAGTGATAAGTCATAATTCTTCCAACACTCCCTTCTCATTCTTCGAGCAATGGAGCAAGAAATATGGT TCAACATTCATGTTCTCGCTTGGGAACATACAGATATTGCATATGAACCATCCTGATGCGGTGAAGGAAATCAGCATCTGCACTTCCTTAGACTTGGGGA AGCCTTCTTACCAAGTAAAAGAGCGCGGTCCTCTGCTTGGCCAAGGTATTCTGACCTCAAATGGTGCAATATGGCAACATCAGAGAAAGATCCTTGCTCC TGAATTTTACTTGGAGAATGTCAAGAATTTCATGAGCATCATGGTCGAATCCTCGAATATAGTAGTTGATTCGTGGACTAAAAGGATTGAAAGTGAGGGA GGAGTTGTGGACATCAACGTTGATGAAGACATGAGAAGCTTCTCTGGAGATGTGATTTCAAAAGCATGTTTTGGGAGTAATTATGCCAAAGGAGAAGAGA TATTCCTCAAGCTTAGAGCTCTTCAAGGAGCCATGTCAAAGAAAGCTTTGTCTTCTGGGATTCCCATTTTGAGGGCTCTACCAACTAAGAGCAACAGAGA AGTTTGGAGATTAGAGAAAGAAGTGCGTGCTTTAATTTTGAAGGAAGTGAAGGAAGAAAAGGAACAAACATCGAAGGACCTGTTAGAAATAATCCTGAAA GGAGCCAAGGATAGTGAGACAAGCCAAGCTGAAATGGACCGTTTCGTTGTTGACAATTGCAAGAACATATACTTGGCTGGCTATGAAACAACTTCAGTCA CTGCACAATGGACAATGATGCTTTTGGGATCAAATCCTGAATGGCAAGATAGAGTTCGAGCCGAGGTGCTTGAGGTCTGTGGGGGGCAAATGCCTGATGC TGACATGGTTCGCAGGATGAAAACATTGACGATGGTGATTCATGAATCTCTGCGCCTCTACCCTCCAGTTTGTGTGATATCCAGGGAGGCGTTACAGGAC ATGAAATTTGGAGACATTTTTGTGCCCAAGGGTGTCAACGTTTGGACCTTGATTGTAACCCTACACCAAGACCCTGAAATATGGGGATCTGACGCTGACA AGTTCAATCCTGAGAGGTTTGCCAATGGGGTCAGTGGCGCCTGCAAGCATCCTCATGTTTACATGCCCTTTGGTGTTGGGCCACGGACATGTCTCGGACA GCATTTTGCCATGGCAGAACTCAAAATCCTCATCGCAACGATCGTTTCCAATTTCTCCTTCACTATATCACCCAAATACATTCACGCCCCAGCTCTTTGG TTGGTTATAGAACCTGAGCATGGAGTGAATCTTCTCATTAAAAAGCTGTGA
AA sequence Show only first row Show all	>Potri.008G026300.1 pacid=42807065 polypeptide=Potri.008G026300.1.p locus=Potri.008G026300 ID=Potri.008G026300.1.v4.1 annot-version=v4.1 MELLLLLLPKVTVAVALIGLVSIVIRMCDALIFKPEKLRSKLRNQGIRGPPPAFLLGNIRDIKKARSKVSKASREGEQVISHNSSNTPFSFFEQWSKKYG STFMFSLGNIQILHMNHPDAVKEISICTSLDLGKPSYQVKERGPLLGQGILTSNGAIWQHQRKILAPEFYLENVKNFMSIMVESSNIVVDSWTKRIESEG GVVDINVDEDMRSFSGDVISKACFGSNYAKGEEIFLKLRALQGAMSKKALSSGIPILRALPTKSNREVWRLEKEVRALILKEVKEEKEQTSKDLLEIILK GAKDSETSQAEMDRFVVDNCKNIYLAGYETTSVTAQWTMMLLGSNPEWQDRVRAEVLEVCGGQMPDADMVRRMKTLTMVIHESLRLYPPVCVISREALQD MKFGDIFVPKGVNVWTLIVTLHQDPEIWGSDADKFNPERFANGVSGACKHPHVYMPFGVGPRTCLGQHFAMAELKILIATIVSNFSFTISPKYIHAPALW LVIEPEHGVNLLIKKL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G24910		ELA1, CYP714A1	EUI-like p450 A1, cytochrome P...		Potri.008G026300 [exp]	0	1
AT4G16760		ATACX1, ACX1	acyl-CoA oxidase 1 (.1.2)		Potri.001G155500 [exp]	1.73	0.7922	Pt-ACX1.2
AT5G24910		ELA1, CYP714A1	EUI-like p450 A1, cytochrome P...		Potri.008G026200 [exp]	3.00	0.7246
AT2G43020		ATPAO2	polyamine oxidase 2 (.1)		Potri.005G207300 [exp]	9.48	0.6822
AT4G36810		GGPS1	geranylgeranyl pyrophosphate s...		Potri.007G031100 [exp]	11.18	0.6950
AT3G11420			Protein of unknown function (D...		Potri.008G058900 [exp]	14.00	0.6904
AT4G05530		SDRA, IBR1	SHORT-CHAIN DEHYDROGENASE/REDU...		Potri.011G022400 [exp]	16.97	0.6634
AT4G39660		AGT2	alanine:glyoxylate aminotransf...		Potri.005G082100 [exp]	20.85	0.6650
AT1G76140			Prolyl oligopeptidase family p...		Potri.002G013900 [exp]	25.45	0.6851
AT3G06130			Heavy metal transport/detoxifi...		Potri.010G175800 [exp]	28.98	0.6240
AT3G17860	ZIM	TIFY6B, JAI3, J...	JASMONATE-INSENSITIVE 3, jasmo...		Potri.008G133400 [exp]	31.52	0.6704

Compare expression of checked genes

Potri.008G026300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.