Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP704B3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69500 868 / 0 CYP704B1 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1) AT2G45510 412 / 3e-139 CYP704A2 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) AT2G44890 390 / 9e-131 CYP704A1 "cytochrome P450, family 704, subfamily A, polypeptide 1", cytochrome P450, family 704, subfamily A, polypeptide 1 (.1.2) AT1G63710 374 / 5e-124 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT4G00360 371 / 1e-122 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G01600 370 / 2e-122 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT2G45970 366 / 8e-121 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) AT5G23190 346 / 5e-113 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 342 / 3e-112 Cytochrome P450 superfamily protein (.1) AT5G58860 339 / 1e-110 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G072300 [exp] 439 / 7e-150 AT2G45510 563 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Potri.014G072100 [exp] 433 / 1e-147 AT2G45510 563 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Potri.014G072000 [exp] 402 / 2e-135 AT2G45510 706 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Potri.012G131200 [exp] 369 / 4e-122 AT2G44890 511 / 7e-178 "cytochrome P450, family 704, subfamily A, polypeptide 1", cytochrome P450, family 704, subfamily A, polypeptide 1 (.1.2) Potri.007G072100 [exp] 369 / 1e-121 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.014G085800 [exp] 368 / 3e-121 AT2G45970 866 / 0.0 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Potri.003G129100 [exp] 363 / 2e-119 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.009G043700 [exp] 358 / 3e-118 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.005G092200 [exp] 359 / 1e-117 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037157 [exp] 910 / 0 AT1G69500 868 / 0.0 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1) Lus10036772 [exp] 910 / 0 AT1G69500 863 / 0.0 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1) Lus10037999 [exp] 427 / 1e-143 AT2G45510 539 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Lus10038896 [exp] 410 / 5e-138 AT2G45510 582 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Lus10015018 [exp] 400 / 6e-134 AT2G45510 586 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Lus10009232 [exp] 404 / 7e-131 AT2G45510 639 / 0.0 "cytochrome P450, family 704, subfamily A, polypeptide 2", cytochrome P450, family 704, subfamily A, polypeptide 2 (.1) Lus10040687 [exp] 360 / 7e-119 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 360 / 9e-119 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 360 / 5e-118 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10010193 [exp] 350 / 2e-114 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.008G088900.2 pacid=42806574 polypeptide=Potri.008G088900.2.p locus=Potri.008G088900 ID=Potri.008G088900.2.v4.1 annot-version=v4.1 ATGGAGGAAGATAAGAATCTTCCATTAGTTTCTTCTAATTCATGTGGCTACAACATGGGAATGGTATTGATGCTAGCTTGCATGGTTTTGTCATGGATTT TTATCCACAGATGGAACCAGAGGCAAAAGAGAGGCCCGAAAACATGGCCGATTGTAGGAGCAGCAATTGAGCAGTTTATGAACTATAATCAAATGCATGA CTGGCTTGTTAAATACCTGTCTGAGTTAAGAACGGTGGTTGTACCAATGCCATTCACAACATATACTTACATTGCAGATCCTGCTAATGTAGAACATGTC CTCAAGACCAACTTTGCTAATTATCCCAAGGGTGAGACATACCACTCATATATGGAAGTCCTGCTTGGAGATGGGATATTTAATGTAGATGGAGAACTCT GGAGGAAGCAGAGGAAGACTGCTAGTTTTGAGTTTGCTTCCAGGAATTTAAGGGACTTTAGCACAGTAGTCTTCAGGGAGTATAGCTTGAAGCTCTCTTC TATTCTTAGTCAAGCATCTTTCCACAATCAAGAAGTAGAAATGCAGGGATTGTTAATGAGGATGACTTTGGACTCCATATGCAAAGTTGGGTTTGGAGTA GAAATTGGAACGCTGACTCCCAGCCTACCAGACAATCGCTTTGCTCAGGCATTTGATACTGCCAACATCATCGTGACGCTTCGGTTCATCGATCCATTGT GGAAAGTAAAGAAATTTCTTAATGTGGGTTCAGAGGCTCTACTTGATAAGAGCATTAAAATCGTTGATGATTTCACCTACTCCATGATTCGCAAAAGGAA AGCAGAAATAGAAGAAGCGCGAGGCACTGGTAAAAATAACAAGATGAAGCATGACATACTATCAAGGTTCATTGAGCTAGGTGAAGACCCGGAAAGCAAC TTGACAGACAAAAGCCTAAGAGATGTTGTCCTGAACTTTGTGATAGCAGGGAGAGATACAACAGCAACAACTCTCTCATGGGCTATATACATGGTAATGA CACATAACCATGTAGCCGAGAAGCTTTACTCCGAGCTCAAATTTTTTGAAGAGGATAGGGCAAAGGAAGAGAATGTTAAGTTGCATCAGATAAACACAGA AGATCCTGAATCTTTCAGTCAAAGGGTAATGCAATTTGCAGGATTTCTGACTTATGATTCCTTGGGAAGATTATACTATTTGCATGCAGTGATCACAGAG ACACTTCGTTTGTATCCAGCAGTCCCTCAGGACCCCAAGGGTATCCTGGAGGACGATGTCTTGCCTGATGGAACCAAAGTAAAAGCAGGAGGCATGGTTA CTTATGTTCCCTATTCCATGGGTAGAATGGAGTATAATTGGGGTCCTGATGCAGCTTCATTCAAGCCTGAGAGATGGCTCAAAGATGGTTTCTTCCAAAA TGCATCCCCGTTCAAGTTCACTGCATTTCAAGCTGGACCAAGGATATGCCTGGGTAAGGACTCTGCATATCTCCAAATGAAGATGGCACTGGCCTTATTG TGTAGATTTTTCAGCTTTAGTTTAGTTCCAAATCATTCAGTAGATTACAGAATGATGACAACACTCTCGATGGCACATGGCCTGAAGCTTAGGATAGCCA GGAAATCGTAA
AA sequence Show only first row Show all	>Potri.008G088900.2 pacid=42806574 polypeptide=Potri.008G088900.2.p locus=Potri.008G088900 ID=Potri.008G088900.2.v4.1 annot-version=v4.1 MEEDKNLPLVSSNSCGYNMGMVLMLACMVLSWIFIHRWNQRQKRGPKTWPIVGAAIEQFMNYNQMHDWLVKYLSELRTVVVPMPFTTYTYIADPANVEHV LKTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASRNLRDFSTVVFREYSLKLSSILSQASFHNQEVEMQGLLMRMTLDSICKVGFGV EIGTLTPSLPDNRFAQAFDTANIIVTLRFIDPLWKVKKFLNVGSEALLDKSIKIVDDFTYSMIRKRKAEIEEARGTGKNNKMKHDILSRFIELGEDPESN LTDKSLRDVVLNFVIAGRDTTATTLSWAIYMVMTHNHVAEKLYSELKFFEEDRAKEENVKLHQINTEDPESFSQRVMQFAGFLTYDSLGRLYYLHAVITE TLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGFFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALL CRFFSFSLVPNHSVDYRMMTTLSMAHGLKLRIARKS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G69500		CYP704B1	"cytochrome P450, family 704, ...		Potri.008G088900 [exp]	0	1	CYP704B3
AT2G19570		DESZ, AT-CDA1, ...	cytidine deaminase 1 (.1)		Potri.018G066400 [exp]	3.87	0.8533	CDA1.2
AT5G05340			Peroxidase superfamily protein...		Potri.013G156500 [exp]	5.65	0.8493	Pt-PRX1.15
AT1G28480		roxy19, GRX480	Thioredoxin superfamily protei...		Potri.004G049800 [exp]	17.54	0.8711	Pt-GRX.2
AT4G16260			Glycosyl hydrolase superfamily...		Potri.010G142800 [exp]	18.49	0.7667	HGN1.1
AT1G14600	GARP		Homeodomain-like superfamily p...		Potri.010G099600 [exp]	19.89	0.8338
					Potri.017G153100 [exp]	20.24	0.7628
AT3G05858			unknown protein		Potri.013G001800 [exp]	29.29	0.7703
AT3G03720		CAT4	cationic amino acid transporte...		Potri.019G039600 [exp]	30.00	0.7695
AT5G17380			Thiamine pyrophosphate depende...		Potri.004G094600 [exp]	35.19	0.7435
AT3G53310	B3	REM20	AP2/B3-like transcriptional fa...		Potri.004G219800 [exp]	35.91	0.7925

Compare expression of checked genes

Potri.008G088900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.