Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G48090 3780 / 0 calcium-dependent lipid-binding family protein (.1) AT4G17140 1345 / 0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) AT5G24740 142 / 2e-35 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) AT1G04090 46 / 0.0007 Plant protein of unknown function (DUF946) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G148800 [exp] 1907 / 0 AT4G17140 3708 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Potri.001G455600 [exp] 116 / 5e-25 AT5G24740 3006 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Potri.009G102900 [exp] 48 / 0.0002 AT3G19190 1477 / 0.0 autophagy 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017107 [exp] 5720 / 0 AT1G48090 3351 / 0.0 calcium-dependent lipid-binding family protein (.1) Lus10037833 [exp] 3444 / 0 AT1G48090 2202 / 0.0 calcium-dependent lipid-binding family protein (.1) Lus10003007 [exp] 1806 / 0 AT4G17140 3544 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10011036 [exp] 1791 / 0 AT4G17140 3546 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10017108 [exp] 207 / 5e-61 AT1G48090 206 / 2e-62 calcium-dependent lipid-binding family protein (.1) Lus10003835 [exp] 99 / 1e-19 AT5G24740 1701 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Lus10017582 [exp] 50 / 5e-05 AT2G44260 582 / 0.0 Plant protein of unknown function (DUF946) (.1), Plant protein of unknown function (DUF946) (.2) Lus10003834 [exp] 50 / 7e-05 AT5G24740 858 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Lus10027952 [exp] 48 / 0.0002 AT3G04350 754 / 0.0 Plant protein of unknown function (DUF946) (.1) Lus10019868 [exp] 47 / 0.0007 AT3G19190 1357 / 0.0 autophagy 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0154 [poplar] [flax] C2 PF00168 [poplar] [flax] C2 C2 domain CL0154 [poplar] [flax] PF06101 [poplar] [flax] Vps62 Vacuolar protein sorting-associated protein 62 CL0484 [poplar] [flax] Peroxisome PF06398 [poplar] [flax] Pex24p Integral peroxisomal membrane peroxin CL0484 [poplar] [flax] PF06650 [poplar] [flax] SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13 CL0484 [poplar] [flax] PF16909 [poplar] [flax] VPS13_C Vacuolar-sorting-associated 13 protein C-terminal
Representative CDS sequence Show only first row Show all	>Potri.008G100600.7 pacid=42808650 polypeptide=Potri.008G100600.7.p locus=Potri.008G100600 ID=Potri.008G100600.7.v4.1 annot-version=v4.1 ATGTTCGAAGCTCACGTTTTGCATTTGCTTCGAAGATACCTGGGCGAATATGTCCACGGGCTGTCAGTGGAGGCTTTAAGAATAAGTGTCTGGAAAGGCG ATGTTGTCCTCAAAGATTTGAATTTGAAGGCTGACGCACTAAATTCACTAAAACTTCCAGTCACTGTCAAAGCTGGTTTTGTTGGTACTATTACATTAAA GGTTCCCTGGAAAAGTTTAGGAAAAGAACCTGTGGTTGTTCTTGTCGATCGCGTTTTCATTCTTGCTCATCCTGCCCCTGATAGCCGGACTCTCAAGGAG GACGACCGGAGAAAACTTTTTGAAACCAAACTTCAACAAATTGAGGAAGCAGAATCTGCAACTCTTGAAGCAACTAGATCAAAGCTGGGAAGTCCTCCTC CAGGAAATTCATGGCTGGGCTCTCTGATTGCCACTATTATTGGAAATCTTAAAATTTCAATTAGCAATGTGCATATCAGATACGAGGATTCAGTCAGTCA TCCTGGGCATCCATTTTCTTGTGGTGTTACCCTAGCGAAGCTGGCAGCTGTCACAACAGATGAGCAGGGTATTGAAACATTTGATATCAGTGGTGCTTTG GATCGATTACGGAAGTCATTACAACTTGAGAGGCTTGCTGTGTATCATGATTCTGATAACCTCCCTTGGAAGAAAGACAAAAAGTGGGAAGATTTAAGTC CTGAGGAATGGGTTGAGATATTTGAAGATGGTGTAAATGAACCCTCTACTGGTCATGGTATGGTGTCTAAATGGGCTATGAATCGTAACTACTTGGTGTC ACCAATCAATGGAGCCCTTAAATATCATCGTCTTGGAAAACAAGAAAGAAGTGATCCAGAGATTCCATTTGAGAAGGCTTCTCTTGTCCTAAGTGATGTC TCATTAACAATTACAGAGGTGCAATATCATGATTGGATAAAACTTTTGGAAGCTGTTTCAAGATACAAGACATATGTTGAAATTTCCCATTTAAGACCTA AGATACCTGTCTCTGACAATCCTTGTCTGTGGTGGCGATATGCTGCTCAAGCTGTTCTGCAGCAGCGAAAAATGTGCTACCGATTCTCATGGGACCGCAT TCAGCATCTCTGTCAGCTTCGTCGCCATTATGTTCAATTGTATGCTGCCATGCTGCAACAATCATCAAATGCTAGCACCTCGGAACTTAGAGAAATGGAG AAAGATCTTGATTCTAAAGTTATTCTCTTGTGGAGGTTACTTGCACATGCCAAGGCTGAATCATTGAAAACAAAGGAAGCTGCTGAGCAGAGGAGGCTAA AAAAGAAAGGCTGGTTTTCATTTGGATGGCGTACGAATTCTGAAGATGCCTCTGATGGGGATGCTTCTGAAGCATCCCAGTTAAGAGAAGAAAAGCTGAC TCAAGAGGAATGGCTTGCAATTAATAAATTGCTTAGTTACCAGTCAGACGAAGAGTTAATGCCACATTCAGGAAAGGACATGCAGAATATGATTCGGTAT TTAGTGACTGTGTCTGTTAAGCAGGCTGCTGCCAGGATAATTGACATAAATCAGACTGAGATTGTCTGTGGTAGATTTGAGCAGCTTCAAGTCTCAACCA AATTGAAAAATCGCTCTACCCACTGTGACGTGTCCCTAAAATTATATGGTTTATCTGCACCAGAAGGTTCACTTGCACAGAGCGTTTCCAGTGAACAGAA GGTGAATGCATTATCTGCCAGTTTTGTACATTCCCCAGTGGGGGAGAATGTTGACTGGAGGTTGTCAGCCACAATTTCGCCTTGCCATGTTACGGTTTTA ATGGAAAGTTTTGATCGCTTTTTTGAGTTTGTGAGGAGAAGTAATGCAGTTAGCCCTACTGTTGCATTAGAAACTGCAAATGCTTTGCAGATGAAGATTG AGAAAGTGACTCGAAGAGCGCAAGAGCAATTTCAAATGGTATTAGAGGAACAAAGCAGATTTGCCCTTGACATTGATCTGGATGCTCCAAAAGTTACAGT TCCTATGAGGACAGTCAGTTCTTCCAACTGTGATATGCATTTTCTTTTGGATTTTGGTCACTTCACATTACACACTATGGAAACAGAGTCTGATGAAAAG AGGCAGAGTATATATTCTCGTTTCTACATATCTGGCAGAGATATAGCTGCTTTCTTTACGGACTGTGATTCTCACTGCTACAACTCCACAGTGGTTGTGC CAAATCATAATAGCCAGTCACTGACATCCCAGATACCAGAAAAAGTTGACAATTACTTTTCTCTTATTGATAGGTGTGGAATGGCTGTAATTGTTGACCA GATCAAAGCACACCACCCTAGTTATCCTTCAACGCGGATTTCTGTTCAAGTACCAAATCTTGGCATTCACTTTTCACCAGCAAGATACTCTAGACTTATG GAATTGGTGAACATACTGTACAATACAGTTGACAACTATGGTCAGTCTACCGTCGATAATTTTCAAACCCAGATTGCTCCTTGGAGTTCTGCTGATCTTG CTACCGATTCTAGAATCCTTGTTTGGAGGGGGATTGGCAATTCTGTGGCTCATTGGCAACCCTGTTTTCTTGTGTTATCTGGACTATATCTTTATGTTAT GGAATCCCAGAAGTCCCAAAGCTACCAGCGATACTTGAGCATGGCTGGTAGACAGATAAATGAGGTTCCTCCATCAAGTGTTGGTGGTTCCCAATTCTGT GTTGCTGTGAGTTTCAGGGGAATGGACATTCAGCAAGCGTTGGAATCTTCTAGTACCTGGATTTTAGAGTTTCAGGATGATGAGGAGAAAACCTGTTGGT TAAAAGGACTTATACAGGCTACCTATCTAGCTTCTGCTCCTCCATCAATGGATGTGCTTGGAGAAACAAGTGGCATTGCATCCAACTTTGGAGAACCTGA AACACCAATTCTGAGAACAGCAGACCTTGTCATCAATGGGGCACTGGTGGAGGCAAAGTTATTCATATATGGAAAGAATGGGGATGAAGTTGATGGGGAA CTTGGAGAGACTCTTATTATCGAGGTTCGTGCTGGCGGGGGAAAGGTGCACATGATTCGTGCAGAGGGTGATCTTAGAGTAAAGATGAAGCTGCATTCCC TAAAAATTAAAGATGAGCTTAAGAGCCGCCAATCTGCAAATCCACGGTATTTAGCCTGCTCGGTGCTAAAGAATGACAAGTTTCTTGTATCCTCTCACAA TGTTGAACCTCTAGGGATGGGGATGCCCGTAGTATCTCATGATGAAGAGGATACTTTTAAGGACGCTTTGCCAGATTTTTTGTCTCTAGCAGATGGTGGC ATTTGGTCACCAAAAATGGACGTCTCTCATTTTGGAATTATGGGAGATGCCAATGACTCTTCAGAATTTGAGTCTCCTGAATCCTTTACTCTTGAGCAAG ATCTGTTACAAGGAAAAACAATTCCTGATGAGATATTTTATGAGGCACACGGCAGTGATAGTTCTGATTTTGTGTCTGTTACTTTCTCGATGCAAAGTTC TTCTTCACCTGATTATGATGGTATAGATACACAGATGAGCATTCGCATGTCCAAACTAGAATTCTTCTGCAATAGACCTACTCTTGTTGCTCTAATAGGT TTTGGCTTTGACCTCAGCTATGTGGATTCATCTGAAAGTGGTACTAACATGACTGAAATCTCAGATGATAAGTCTTCCTTGAAAGAAATGACTGAAGTCA CAGGGCGTATAAAAGGGCTGCTGGGGTATGGTAAAAATCGTGTGGTTTTCTATTTAAACATGAATGTTGACAGTGTCACTGTGTTTCTCAACAAGGAGGA TGATTCTCAACTCGCTATGCTTGTGCAAGAAAGTTTTGTTCTGGATCTCAGGGTCCATCCTAGCTCTCTTTCTATTGAAGGCATGTTAGGAAATTTCAGG CTCTGTGATATGTCACCAGAAACTAATCAATGCTGGAGTTGGGTTTGTGACTTACGTAATCCGGGACTTGATTCCCTTATCAAGTTCAATTTTAGCTCGT ACAGTGCTGAAGATGATGATTATGAAGGATATGATTACAAGTTGAGTGGCCGACTTTCTGCTGCATGCATTATTTTCCTCTATAGGTTTGTCCAGGAGAT AACTGCATACTTTATGGAACTTGCGACCCCAAACACTGAAGAAGCAATAAAACTTGTCGATAAAGTAGGGGGATTTGAGTGGCTAATCCAGAAGTATGAG ATTGATGGAGCCACCGCATTAAAGTTGGACCTCTCACTTGACACTCCGATTATCATCGTTCCTAGGAATTCCATGAGCAAAGAGTTCATTCAACTTGATC TGGGCCAGCTACAGGTGACAAATGAATTAAGTTGGCATGGATCTGCAGAGAAAGATCCTTCAGCTGTCCACATTGATGTTCTTCATGCCGAGATTCAGGG AATCAACATGTCTGTAGGAGTTGACGGTTGTTTAGGCAAGCCTATGATACAAGAAGGCCAAGGATTGGATATTTATGTGCGCCGTAGTTTGCGGGATGTC TTTAGAAAAGTCCCAACATTCTCTCTTGAAGTTAAGGTGGATTTCCTTCGTGGAGTCATATCTGATAAAGAATACAGCATAATTGTTGATTGCATGTGCT TGAATTTACTTGAAGAGCCAAGGATTCCACCAAGTTTTCGTGGCTGCAAATCTGATACGAAAGATGCAATTCGGCTGCTGGTAGATAAGGTCAACACAAA TAGTCAAGTCCTCTCACAAACTGTCACTATAGTGGCAGTTGAGGTTAATTATGCACTGTTGGAGTTGTGTAATGGTGTTCATGAGTCACCTTTAGCACGT CTTGAGCTAGAAGGTCTTTGGGTATCATACAGGATGACTTCGTTGCCTGAAACAGATCTTTATGTAACTATTTCAAAATTTTCTATCTTGGACATTCAGC CAGATACAAAACCTGAAATGCGTCTGATGCTTGGATCATCAACTGATGCTTCCAAACAAGTTTCTGGTGGAAACATCCCATACTCTCTAAATAGAAGTGG CTTTAGGAGAATGAACTCTGAATATGCCCTCGAGGCTGATGCACCAAATTCAACAATGTTTCTAATGGACTATAGATGGAGGCCTTCCTCCCAATCATTT GTAGTTCGCGTTCAGCAGCCACGTGTACTTGTTGTACCAGATTTCCTTCTAGCCGTGGGTGAGTATTTTGTGCCATCATTGGGAACTATAACTGGAAGGG AGGAATTGATTGATCCTAAGAAGGATCCCATTAGCAGAAGCAATAGCATAGTGCTTTCTGAATCTGTTTACAAACAGAGTGAGGATGTGGTTCACTTGTC TCCAAGTAGACAACTAGTAGCAGATGCCAAGACAGTTGATGAATATACATATGATGGTTGTGGAAAGATTATCTGTTTAAGTGAAGAAACAGACACAAAG GAATTCCATTCAGGGAGATCTCGACCAATTATAGTTATTGGACGTGGTAAGAGGTTGCGGTTTGTCAATGTTAAAATTGAGAATGGTTCCCTTTTGAGGA AATATGCATACTTGAGTAATGATAGCAGCTATTCGATCTCCATTGAAGATGGTGTTGACATTTCGTTGCTAGACAATTCTTCATCTGATGACGACAAGAA GATTTTGGATTACATGCATGAACAATCAGATGTCTTAAACTCTTCTGATTCTGAAAACGATTCAAATAGGCTGCAGAGTTTCACTTTTGAATCCCAGGTT GTTTTTCCAGAGTTCACTTTCTATGATGGTACAAAATCTTCACTGGATGATTCTTCATATGGTGAAAAGCTCCTAAGAGCAAAAATGGATTTGAGCTTCA TGTATGCATCCAAAGAAAATGATATCTGGATTAGAGCCCTCGTGAAAGATCTGACTGTTGAGGCTGGTTCTGGTCTCATGATTCTTGATCCAGTGGATAT TTCAGGAGGATATACCTCTGTTAAAGAGAAAACGAACATGTCTCTGATATCAACGGATATATGTGTGCATCTTTCATTGAGTGTCATTTCTCTTCTGCTT AACTTGCTGAATCAAGCTACTACAGCATTGCAATTTGGAAATGCGATTCCCCTGGCACCTTGCTCCAACTTTGACCGAGTTTGGGTCTCCCCTAGAGAAA ATGGCCCTTATAATCACCTTACTTTTTGGAGGCCTCACCCTCCATCAAATTATGTTATATTGGGAGATTGTGTGACATCAAGGCCAATTCCTCCTTCACA GGCAGTCATGGCTGTGAGTAATGCATATGGCCGTGTGCAAAAACCTGTTGGGTTCAATTTCGTTTCCTTATTACCTGGTATTCAAGGGTTTGGAGGTGAA AGCCATTCTGGTTTTGATTGTGATTGTTCTCTATGGGTGCCTGTTGCACCTCCTGGTTACACAGCATTGGGATGTGTAGCACATGTAGGATGCGAACCGC CACCGACTCACATTGTTTATTGCCTACGAACCGACCTTGTAGCATCTTCAACATATTCAGAATGCATTTTTAGTTCTGCACCAAATCCTCAGTCTGCATC TGGTTTGAGCATATGGCGTCTAGACAATGTCATTGCATCTTTTTATGCCCATTCTTCTACTGAATACCCTCCTAGAGATAGTGGTGGTGACCTGAATCAT CTTCTTCTATGGAACTCAATCCGAAATCAATCGTTATCTAGAGATGCGGTATCAGATTCGGCCGATGAACATGACCATGGAAGTCAAACAAGTAACAATA GTGCTAATTCATCTGGATGGGACATTATTAGATCAATTTCAAAAGCAACTAACTCGTATGTGTCAACTCCAAACTTTGAGAGAATATGGTGGGACAAAGG TAGTGAGATCCGTCGACCTGTCTCAATATGGCGACCTATTGCATGTCCAGGTTATGCCATACTAGGAGATTGCATAACTGAAGGCTCAGAACCTCCTGCC CTGGGCATAATATTCAAGATTGGCGATCCTGAAATCTCCTCAAAGCCTGTCCAGTTCACTAAAGTGGCCAATATTGTTGGGAAAGGATTTGATGAAGTCT TCTTCTGGTATCCAATTGCTCCTCCTGGTTATGCTTCACTAGGATGTGTTGTCACCAGAACAGATGAAGCACCACTCTTGAATTCATTTTGTTGCCCGAG GTTGGATATTGTGAACCAAGCTAATATTATTGAGGTGCCTATTTCAAGATCTCCAAGCACAAAAGCATCTCAGTGCTGGAGCATTTGGAAAATCGAAAAT CAGGCATGCACTTTTCTTGCCCGTATGGATCTTAAAAAGCCATCGAGCCGGTTGGCATTCACAATCGCTGATTCTGTGAAGCCAAAATCACGGGAAAATG TAACTGCTGATATCAAGCTAGTATGCTTCTCCATTACCGTTTTAGACAGCCTATGTGGAATGATGACACCTCTATTTGATGTTACCATAACCAATATCAA GCTTGCAACACATGGTCGTCTAGAGGCAATGAATGCTGTTCTAATTTCCTCTATTGCTGCTTCGACCTTCAATGCTCAGTTAGAAGCATGGGAGCCACTG GTGGAGCCATTTGATGGAATATTCAAGTTGGAAACATATGATAACAATGTACATCCACCATCAAGAATTGCAAAGAAAGTACGGGTCGCTGCAACCAGTA TCATGAACATAAATGTCAGTGCAGCAAATCTTGAAACTTTTATAGGGACCATGCTCTCTTGGAGAAAACAGTTAGAACTTGATCAGAAAGCAGTGAAGCT AATTGAGGAAGCTGGTTGTCATCTTAAACATGAAGAGGACCCAACTTTTTCTGCCTTGGATGAAGATGATTTTCAGACTGTAATAATCGAAAATAAACTA GGGTGTGATCTGTATCTGAAACAAATTGAGGACAATACAGATACAGTCAGTCAACTACACAATGATGACTGTACTTTTGTGTGGATCCCACCTCCAACAT TTTCAGACAATCTAAAGGTTGTGGATAGATCTAGGGAAGCACGCTGCTATGTTGCCATTCAAATACTTGAAGCCAAGGGTTTGCCCATTGTTGATGATGG TAACAGTCACAAATTCTTCTGTGCTGTGCGCCTTGTTGTTGATAGTCGGGCAACAGACCAGCAGAAGCTCTTTCCTCAGAGTGTGAGGACAAAATGTGTG AAGCCTTTGCTTCCAAGAGAACATGAAATCACTAGTGCCACTGCAAAGTGGAATGAACTTTTCATATTCGAAATTCCTCGAAAGCAGGGAGTGGCTAAGT TAGAAGTGGAGGTGACAAATCTTGCAGCAAAAGCTGGAAAGGGTGAAGTTGTAGGTGCCCTCTCCCTTCCTGTTGGACAAGGAGCAGTCATGTTGAAGAA GGTGGCTTCTGCAAGAATGCTAAATCAACCACATGATTTTCAGAATGTTATGTCATGCCCATTAAGAAGAAGGGCTCCACATGATGATGTTGAACAAATG CTTGAAAGTGGTCATCTGTTAGTTTCTACTACGTATTTTGAGAGGAATCTGGCAGCAAACTTTCAGAGAGATAAAGAAACTGAGCTATCTCGTAATAGAG ATGTCGGTTTTTGGATCAGGCTTAGCCCGGAAGGTGCATGGGAGAGTGTTCGGTCGTTACTTCCACTGTCTGTGGTACCCAAATTACTACATGATGAATT TCTTGCCATGGAGGTTGTCATGAAAAATGGCAAGAAACATGTAATTTTTAGGGGTCTTGCAATCGTAGTAAATGATTCTGATGTTAAATTGGATATTTCT ATTTGCCACGTGTCTTTGGTTCATGGCCGTGATCCATCTCTAGGAACAAGTAAATTGAACATTGTGATAGAAGAGATATTCGAGAATCAGAGTTATCACC CAATTTCTGGTTGGGGTAACAAGTTGCCTGGTTTTCGAAGTACTGGTCCAGGGCGATGGAGCACTAGGGACTTCTCGTGTTCATCAAAGGATTTTTTTGA ACCTCACCTTCCAACTGGATGGCAATGGACATCTACATGGATTATTGATAAATCTGTACCTGTTGATGATGATGGTTGGACATATGGTCCTGACTTCCAT ACATTGAAGTGGCCTCCAGCTTCAAAGTCATATAAATCTGCTCATAATGTTGTGCGCCGAAGGCGATGGATTCGCAGGAGGCAACAATTAACTGGGGAAG GATCAAATAGCGTGAACAGTGATTTTATTTCCATAAATCCTGGATCATCATCTGTTTTACCATGGAGGAGCATATCCAAAAATTCTGATCTGTGTTTACT AGTACGTCCTTGTGCTGATCATTCTCAGCCTGAATATGTATGGGGCCAAGCAGTTGCTTTCGTTTCTGACTACATGTTTGAGAAGGATCAACCTTTCAGT GATCAAGGCTTGCTTGCAAGACAAAATACTTTAAAGCAGCAAAGAAAAATGCCAAATGCTTTTATGCTGAATCAGCTGGAGAAGAAGGATGTTCTTTTCC ATTGTCGCCCAAGTAGTGGAAGTGCAGCATTTTGGCTCAGTGTGGGTGCTGATGCTTCAATCCTCCACACTGAATTAAATTCTCCTGTTTATGATTGGAG AATATCTATTAACTCCCCATTGAAGCTGGAAAACCAACTTCCTTGTGCAGCAGAATTTACAGTTTGGGAAAAGGGAAAAGAAGGGAATTGCATTGAGCGG CAACATGGTATAATCTCTTCACGCCAGAGCATACATGTATATTCAGCTGATATCCGTAAATCTGTCTATCTTACATTGCTTCTTCAGGGTGGTTGGGTTC TTGAAAAGGATCCTGCCCTCGTGCTGGATCTTGGTTCTAGTGGTCAAATCTCATCATTCTGGATGGTCCACCAACAAAGTAAAAGGAGACTGCGTGTGAG CATTGAACGAGACATGGGAGGAACCACTTCGGCTCCTAAAACAATTAGGTTATTTGTACCATATTGGATCGTAAATGATTCATCTCTACCATTATCATAT CGAGTGGTAGAGATTGAGCCATTAGAGACAGTTAAGTCTGTGAAAGCTTCCTTTAAAAATCCCACAAACTCCATGGAAAGGAGATTTGGCACAAAGAGAA ATGTTCAAGTACTTGAAGTGATTGAGGATACCAGCCCGATACCGAGCATGCTTTCTCCTCAAGACACTGCTGGTCGGAGTGGGATTATGTTGTTTCCATC TCAAAAAGATGCATACCTGTCTCCACGTTTGGGCCTTGCAGTAGCTATTCATCATTCTGAGATCTATAGTCCTGGGATTTCTTTTCTTGAGCTGGAAAAG AAGGAAAGGGTTGGCATAAAGGCATTTGGTTCTGATGGATCTTACTACAAGCTTTCAGCATTACTGAAGACCTCAGACAGAACAAAGGTTCTTCATATTC AGCCACACACCTTGTTCATCAATAGGCTGGGTTTCAGTCTCTGCCTGCAGCAATGCGGTTCCCAGCTGGTGGAATGGATTCACCCCGCTGATGCTCCAAA ACCCTTTGGATGGCACTCTTCTGCCGATGTCGAGCTGTTGAAGTTGCGAGTGGATGGATACAAATGGAGCACTCCATTTAGTATTTGTAATGAAGGAATG ATGCGAATATCCTTGGAGAAAGATTCGGGAGATGATCAAATGCAGCTGAGGGTACAAGTAAGAAGTGGCACAAAGAGAACACAATATGAAGTTATTTTCC GCCCAAATTCTTTGTCCAGTCCTTACAGGATTGAAAATCATTCGTTCTTTTTACCCATTCGCTTTCGGCAAGTGGATGGTCCCAGTGAATCATGGAAGCT TCTTCTTCCAAATGCAGCTGCTTCTTTCTTATGGGAAGACTTTGGTAGACCAAGATTATTGGAACTTTTAGTTGATGGAACAGATTCATCAAAATCATTG AAATACAATATCGATGAGATTCTTGATCACCAGCCCAATCATGCAGAGGGTCAGCCTGTTAGACCATTACGGGTTACTGTTCTAAAAGAAGACAAAATGA ATATTGTTAGGATCAGTGACTGGATGCCAGAAAATGAACTTCCAATTACTGGTAAAAGAGTCCAACCGCCATTATCACAACTTTGTGGAAATGACTCTCT ACAACAGCAGTTGCCATTGTCCACAGGTTGTGAATTTCATGTTGTTCTTGAGCTTGCTGAGCTTGGAATATCTGTTATTGACCACACACCTGAGGAGATT TTATATCTTTCTGTCCAGAATCTTCTTTTAGCATATTCTACTGGTTTGGGGTCTGGGTTTAGTAGGTTGAATCTAAGAGTGCATGGAATACAAGTGGATA ACCAGTTACCATTAACTCCAATGCCAGTTCTCTTCAGACCACAGAAAGTTGGGGAGGATAGAGACTATGTATTGAAGTTTTCCATGACAATGCAATCAAA TGGATCTTTAGATTTATGTCTCTATCCCTATATTGGTTTCACTGGACCTGAAAGTTCTGCTTTCATAATAAACATCCATGAACCTATCATTTGGCGCCTT CATGAGATGATCCAGCAGGTCAACCTCAGTAGGTTATATGATACAAAAACAACTGCCGTGTCGGTTGATCCAATTATTCATATTGGTGTTCTCAACATCT CAGAAGTTCGATTCAAAGTTTCAATGGCCATGTCACCTAGTCAAAGGCCAAGAGGAGTACTCGGGTTCTGGTCATCCTTGATGACTGCTTTGGGCAACAC TGAAAATATGCCTGTGAGATTAAATCAAAGATTTAATGAGAATATGTGCATGAGACAGAGTACTATGATAGGTATTGCTGTCTCAAACATAAAAAAGGAT CTACTTCGCCAACCTCTTCAACTGCTCTCTGGTGTTGATATATTGGGCAATGCAAGCAGTGCACTTGGACATATGAGTAAAGGTGTAGCTGCCTTATCGA TGGATAAAAAATTCATCCAAAGTCGACAGAGACAGGAGAACAAAGGTGTAGAGGCTCTTGGTGATGTCATTAGGGAGGGAGGCGGAGCACTAGCAAAAGG CCTCTTTAGAGGAGTTACCGGTATTCTAACAAAGCCTCTTGAAGGTGCAAAAAATTCAGGTGTTGAGGGTTTTGTTCAGGGAGTTGGAAAAGGAATAATA GGTGCAGCTGCTCAGCCAGTCAGTGGGGTTTTGGATCTTTTGTCCAAAACCACGGAAGGGGCCAATGCTATGAGAATGAAGATAACATCAGCTATAACCT CAGAGGAACAACTGCTCCGCCAGAGGTTGCCTCGTGTTATTAGTGCTGATAATTTGCTTCGACCTTATAATGAGTACAAATCCCAAGGGCAGGTTATATT GCAGCTGGCAGAGTCGGGTTCATTTTTTGGCCAGGTTGATCTATTTAAAGTGCGTGGGAAGTTTGCCTTATCAGATGCTTATGAAGATCACTTTATGCTC CCTAAAGGAAAGATCATTGTGGTAACACATCGAAGAGTCATGTTGCTGCAACAACCATCCAACATTTTAGCTCAGAGGAAGTTCAGCCCGGCAAGGGATC CATGTTCAGTATCGTGGGGTGTTTTATGGGTTGACTTGGTGACCATGGAATTGACTCATGGGAAGAAGGACCAACCAAAAGCTCCACCTTCACACCTCAC TCTTTATTTACGGAGTAGATCAACAGAGTCAAAAGAACAATTTCGTGTGATAAAATGCAGCCGTGAGACAGATCAGGCCCTGAAGGTCTACTCTTCAATA GAGAGAGCAGTTAACACTTACGGACGCAACCTATCAAATGAAATGCTCAAAAATCAAGTGACAAAACCGTATGCACCGAGTGCAGATGTCTCCAGACTTG AAGGAATTTCAAAGGAAGGGGATTGTATCTGGTCTCCCCAACAGATGCCTGAGTCAGTTACTCAGAGTTCAACATTTGGCAACAGCTCCAATTGA
AA sequence Show only first row Show all	>Potri.008G100600.7 pacid=42808650 polypeptide=Potri.008G100600.7.p locus=Potri.008G100600 ID=Potri.008G100600.7.v4.1 annot-version=v4.1 MFEAHVLHLLRRYLGEYVHGLSVEALRISVWKGDVVLKDLNLKADALNSLKLPVTVKAGFVGTITLKVPWKSLGKEPVVVLVDRVFILAHPAPDSRTLKE DDRRKLFETKLQQIEEAESATLEATRSKLGSPPPGNSWLGSLIATIIGNLKISISNVHIRYEDSVSHPGHPFSCGVTLAKLAAVTTDEQGIETFDISGAL DRLRKSLQLERLAVYHDSDNLPWKKDKKWEDLSPEEWVEIFEDGVNEPSTGHGMVSKWAMNRNYLVSPINGALKYHRLGKQERSDPEIPFEKASLVLSDV SLTITEVQYHDWIKLLEAVSRYKTYVEISHLRPKIPVSDNPCLWWRYAAQAVLQQRKMCYRFSWDRIQHLCQLRRHYVQLYAAMLQQSSNASTSELREME KDLDSKVILLWRLLAHAKAESLKTKEAAEQRRLKKKGWFSFGWRTNSEDASDGDASEASQLREEKLTQEEWLAINKLLSYQSDEELMPHSGKDMQNMIRY LVTVSVKQAAARIIDINQTEIVCGRFEQLQVSTKLKNRSTHCDVSLKLYGLSAPEGSLAQSVSSEQKVNALSASFVHSPVGENVDWRLSATISPCHVTVL MESFDRFFEFVRRSNAVSPTVALETANALQMKIEKVTRRAQEQFQMVLEEQSRFALDIDLDAPKVTVPMRTVSSSNCDMHFLLDFGHFTLHTMETESDEK RQSIYSRFYISGRDIAAFFTDCDSHCYNSTVVVPNHNSQSLTSQIPEKVDNYFSLIDRCGMAVIVDQIKAHHPSYPSTRISVQVPNLGIHFSPARYSRLM ELVNILYNTVDNYGQSTVDNFQTQIAPWSSADLATDSRILVWRGIGNSVAHWQPCFLVLSGLYLYVMESQKSQSYQRYLSMAGRQINEVPPSSVGGSQFC VAVSFRGMDIQQALESSSTWILEFQDDEEKTCWLKGLIQATYLASAPPSMDVLGETSGIASNFGEPETPILRTADLVINGALVEAKLFIYGKNGDEVDGE LGETLIIEVRAGGGKVHMIRAEGDLRVKMKLHSLKIKDELKSRQSANPRYLACSVLKNDKFLVSSHNVEPLGMGMPVVSHDEEDTFKDALPDFLSLADGG IWSPKMDVSHFGIMGDANDSSEFESPESFTLEQDLLQGKTIPDEIFYEAHGSDSSDFVSVTFSMQSSSSPDYDGIDTQMSIRMSKLEFFCNRPTLVALIG FGFDLSYVDSSESGTNMTEISDDKSSLKEMTEVTGRIKGLLGYGKNRVVFYLNMNVDSVTVFLNKEDDSQLAMLVQESFVLDLRVHPSSLSIEGMLGNFR LCDMSPETNQCWSWVCDLRNPGLDSLIKFNFSSYSAEDDDYEGYDYKLSGRLSAACIIFLYRFVQEITAYFMELATPNTEEAIKLVDKVGGFEWLIQKYE IDGATALKLDLSLDTPIIIVPRNSMSKEFIQLDLGQLQVTNELSWHGSAEKDPSAVHIDVLHAEIQGINMSVGVDGCLGKPMIQEGQGLDIYVRRSLRDV FRKVPTFSLEVKVDFLRGVISDKEYSIIVDCMCLNLLEEPRIPPSFRGCKSDTKDAIRLLVDKVNTNSQVLSQTVTIVAVEVNYALLELCNGVHESPLAR LELEGLWVSYRMTSLPETDLYVTISKFSILDIQPDTKPEMRLMLGSSTDASKQVSGGNIPYSLNRSGFRRMNSEYALEADAPNSTMFLMDYRWRPSSQSF VVRVQQPRVLVVPDFLLAVGEYFVPSLGTITGREELIDPKKDPISRSNSIVLSESVYKQSEDVVHLSPSRQLVADAKTVDEYTYDGCGKIICLSEETDTK EFHSGRSRPIIVIGRGKRLRFVNVKIENGSLLRKYAYLSNDSSYSISIEDGVDISLLDNSSSDDDKKILDYMHEQSDVLNSSDSENDSNRLQSFTFESQV VFPEFTFYDGTKSSLDDSSYGEKLLRAKMDLSFMYASKENDIWIRALVKDLTVEAGSGLMILDPVDISGGYTSVKEKTNMSLISTDICVHLSLSVISLLL NLLNQATTALQFGNAIPLAPCSNFDRVWVSPRENGPYNHLTFWRPHPPSNYVILGDCVTSRPIPPSQAVMAVSNAYGRVQKPVGFNFVSLLPGIQGFGGE SHSGFDCDCSLWVPVAPPGYTALGCVAHVGCEPPPTHIVYCLRTDLVASSTYSECIFSSAPNPQSASGLSIWRLDNVIASFYAHSSTEYPPRDSGGDLNH LLLWNSIRNQSLSRDAVSDSADEHDHGSQTSNNSANSSGWDIIRSISKATNSYVSTPNFERIWWDKGSEIRRPVSIWRPIACPGYAILGDCITEGSEPPA LGIIFKIGDPEISSKPVQFTKVANIVGKGFDEVFFWYPIAPPGYASLGCVVTRTDEAPLLNSFCCPRLDIVNQANIIEVPISRSPSTKASQCWSIWKIEN QACTFLARMDLKKPSSRLAFTIADSVKPKSRENVTADIKLVCFSITVLDSLCGMMTPLFDVTITNIKLATHGRLEAMNAVLISSIAASTFNAQLEAWEPL VEPFDGIFKLETYDNNVHPPSRIAKKVRVAATSIMNINVSAANLETFIGTMLSWRKQLELDQKAVKLIEEAGCHLKHEEDPTFSALDEDDFQTVIIENKL GCDLYLKQIEDNTDTVSQLHNDDCTFVWIPPPTFSDNLKVVDRSREARCYVAIQILEAKGLPIVDDGNSHKFFCAVRLVVDSRATDQQKLFPQSVRTKCV KPLLPREHEITSATAKWNELFIFEIPRKQGVAKLEVEVTNLAAKAGKGEVVGALSLPVGQGAVMLKKVASARMLNQPHDFQNVMSCPLRRRAPHDDVEQM LESGHLLVSTTYFERNLAANFQRDKETELSRNRDVGFWIRLSPEGAWESVRSLLPLSVVPKLLHDEFLAMEVVMKNGKKHVIFRGLAIVVNDSDVKLDIS ICHVSLVHGRDPSLGTSKLNIVIEEIFENQSYHPISGWGNKLPGFRSTGPGRWSTRDFSCSSKDFFEPHLPTGWQWTSTWIIDKSVPVDDDGWTYGPDFH TLKWPPASKSYKSAHNVVRRRRWIRRRQQLTGEGSNSVNSDFISINPGSSSVLPWRSISKNSDLCLLVRPCADHSQPEYVWGQAVAFVSDYMFEKDQPFS DQGLLARQNTLKQQRKMPNAFMLNQLEKKDVLFHCRPSSGSAAFWLSVGADASILHTELNSPVYDWRISINSPLKLENQLPCAAEFTVWEKGKEGNCIER QHGIISSRQSIHVYSADIRKSVYLTLLLQGGWVLEKDPALVLDLGSSGQISSFWMVHQQSKRRLRVSIERDMGGTTSAPKTIRLFVPYWIVNDSSLPLSY RVVEIEPLETVKSVKASFKNPTNSMERRFGTKRNVQVLEVIEDTSPIPSMLSPQDTAGRSGIMLFPSQKDAYLSPRLGLAVAIHHSEIYSPGISFLELEK KERVGIKAFGSDGSYYKLSALLKTSDRTKVLHIQPHTLFINRLGFSLCLQQCGSQLVEWIHPADAPKPFGWHSSADVELLKLRVDGYKWSTPFSICNEGM MRISLEKDSGDDQMQLRVQVRSGTKRTQYEVIFRPNSLSSPYRIENHSFFLPIRFRQVDGPSESWKLLLPNAAASFLWEDFGRPRLLELLVDGTDSSKSL KYNIDEILDHQPNHAEGQPVRPLRVTVLKEDKMNIVRISDWMPENELPITGKRVQPPLSQLCGNDSLQQQLPLSTGCEFHVVLELAELGISVIDHTPEEI LYLSVQNLLLAYSTGLGSGFSRLNLRVHGIQVDNQLPLTPMPVLFRPQKVGEDRDYVLKFSMTMQSNGSLDLCLYPYIGFTGPESSAFIINIHEPIIWRL HEMIQQVNLSRLYDTKTTAVSVDPIIHIGVLNISEVRFKVSMAMSPSQRPRGVLGFWSSLMTALGNTENMPVRLNQRFNENMCMRQSTMIGIAVSNIKKD LLRQPLQLLSGVDILGNASSALGHMSKGVAALSMDKKFIQSRQRQENKGVEALGDVIREGGGALAKGLFRGVTGILTKPLEGAKNSGVEGFVQGVGKGII GAAAQPVSGVLDLLSKTTEGANAMRMKITSAITSEEQLLRQRLPRVISADNLLRPYNEYKSQGQVILQLAESGSFFGQVDLFKVRGKFALSDAYEDHFML PKGKIIVVTHRRVMLLQQPSNILAQRKFSPARDPCSVSWGVLWVDLVTMELTHGKKDQPKAPPSHLTLYLRSRSTESKEQFRVIKCSRETDQALKVYSSI ERAVNTYGRNLSNEMLKNQVTKPYAPSADVSRLEGISKEGDCIWSPQQMPESVTQSSTFGNSSN

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G48090			calcium-dependent lipid-bindin...		Potri.008G100600 [exp]	0	1
AT1G24300			GYF domain-containing protein ...		Potri.001G326700 [exp]	2.00	0.9051
AT2G17930			Phosphatidylinositol 3- and 4-...		Potri.005G114300 [exp]	2.82	0.8998
AT1G24300			GYF domain-containing protein ...		Potri.017G069220 [exp]	3.46	0.8997
AT5G07980			dentin sialophosphoprotein-rel...		Potri.012G061400 [exp]	4.47	0.8819
AT3G07160		CALS9, ATGSL10	glucan synthase-like 10 (.1)		Potri.001G011900 [exp]	5.47	0.8567
AT3G61690			nucleotidyltransferases (.1)		Potri.012G000900 [exp]	6.48	0.8775
AT1G22860			Vacuolar sorting protein 39 (....		Potri.001G081900 [exp]	8.83	0.8800
AT4G32820			Tetratricopeptide repeat (TPR)...		Potri.018G057900 [exp]	9.48	0.8722
AT4G11270			Transducin/WD40 repeat-like su...		Potri.003G132900 [exp]	10.09	0.8522
AT1G10390			Nucleoporin autopeptidase (.1....		Potri.001G453200 [exp]	10.67	0.8476

Compare expression of checked genes

Potri.008G100600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.