Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G65810 681 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) AT1G65780 652 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37150 577 / 3e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G52090 521 / 3e-163 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37160 526 / 4e-162 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37140 511 / 2e-159 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G05540 508 / 4e-158 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37030 348 / 6e-104 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G19120 212 / 5e-55 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G16800 186 / 1e-46 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G143000 [exp] 5487 / 0 AT1G65810 680 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.008G143450 [exp] 5375 / 0 AT1G65810 694 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140200 [exp] 775 / 0 AT1G65780 816 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077700 [exp] 768 / 0 AT1G65810 818 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140501 [exp] 766 / 0 AT1G65780 798 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077650 [exp] 741 / 0 AT1G65810 559 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140601 [exp] 739 / 0 AT1G65780 777 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077800 [exp] 734 / 0 AT1G65780 719 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077600 [exp] 711 / 0 AT1G65810 843 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035776 [exp] 2686 / 0 AT1G65810 633 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10013768 [exp] 1112 / 0 AT1G65780 69 / 4e-11 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035775 [exp] 817 / 0 AT5G37150 561 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035774 [exp] 802 / 0 AT1G65810 541 / 7e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10037353 [exp] 779 / 0 AT1G65810 543 / 2e-177 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10033462 [exp] 198 / 2e-50 AT4G30100 1589 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10039165 [exp] 177 / 6e-50 ND / Lus10035717 [exp] 178 / 4e-44 AT1G16800 1196 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10015030 [exp] 174 / 8e-44 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10037303 [exp] 175 / 3e-43 AT1G16800 1190 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00580 [poplar] [flax] UvrD-helicase UvrD/REP helicase N-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF13086 [poplar] [flax] AAA_11 AAA domain CL0023 [poplar] [flax] P-loop_NTPase PF13087 [poplar] [flax] AAA_12 AAA domain
Representative CDS sequence Show only first row Show all	>Potri.008G142960.1 pacid=42808092 polypeptide=Potri.008G142960.1.p locus=Potri.008G142960 ID=Potri.008G142960.1.v4.1 annot-version=v4.1 ATGATGGAAAGATCAGAGAGTTCAAGCAAGATGATGAAGAAGAAAGAAATTACTAATGATCATGGCTTCGTTGACACCATTTTTTCATGGTCTCTTGAGG ATATATTCAATGAAAATCTTTTCAAGGTGGAAAATATTCCAGAGTCATATTACTCGGTTGAGCATTATCTTGGATCATATGTAATTCCTTTGTTGGAAGA AACCCGTGCACAATTGAGCTCAAGCATGGATATTATATCCAGAGCACCGTTTGCTGAAATGGTTGCTTTCTTTGAGGCCAAGCCCCAGGGCACATTATTG TATGATGTTAATATTGATTATTGGAGAAACAGATTCCGTGGCAGTGGTAATGAGCATTACAAAACACTGCCCGGCGACATCGTTATTTTAACAAGCGCTA AACCTGAAAATGTCTCTGATTTGCAAAGGGTTGGATGGACATGGACATTTGCTGTGGTCACCAGTATAACAGGAGATGAGACCGAGGATGCTGCTACATA TACTTCTTTCACAGTCAAGGCGCAAAAAGACATTGAAATTAGTGATGGACTGCAGAAATCACTTACTGTGATTTCATTGACTAATATAACAACTAGCAAA AGAATATGGAATGCACTCCACATGTTCGGAAACTTGAATATCATCAAAGAGATTCTGTGCACTGATTCTGTGGTTGAGGAAAATTGCAACCAATATTCTA TGTGGGAACGTGCAATCTATGATGAGAATGTTGTGAATTTGTCATCTAAACTGAATGAATCCCAAAGCAAGGCGGTTTTGGCATGTCTGCTTAAAAAGCA ACGCAACCATAAGTCGGCAGTTGAACTTATTTGGGGCCCGCCAGGGACTGGGAAAACCAAAACAGTCAGTATGTTGCTCTTTAGCCTCCTAAAAATGAAA TGCAGAACTCTAACATGTGGCCCAACCAATGTTTCAATTACAGAAGTGGCCTCTAGGGTGCTCAAGCTGGTCACAGAATCGCATGAAGCAGATTCAGGAA CCGATTCTTTGTTTCATTCTGTGGGAGAAATTCTTTTGTTTGGGAATAAGGACAGACTCAAAGTTGATTCTGAAACTCAGGAAGTCTATTTGGATTATCG TGTCAAAAGGCTTATAGAGTGCTTTGCACCTCTGACTGGTTGGAGGAATTGTTTCAATTCGACAATTGATTTTTTTGAAGATTGTGTTTCTCAGTATGCC ATTTTCGTGGAGAATGAATTAATCAAAATGCAGGAGCATGATGATGAAAATGAAGAGAAAAGGGAATCTTGTAGCTATCAAGCTGTTGCACTCAAAGGAG AGCTGAAAACGTTTCTCGAATTTATGAGAGATAGATTCCGCTCTACTGTATTACCTCTAAAAAGATGCCTCACTTTATTATGCACTCACATACCAGAAAC TTGCATTCTCAAACATAACATTCAGAACATCGTATACTTGTTTGGTTCACTTAACTCTTTTGAATCTTGGCTATTCCCCGAGGGTGTGATTTCTGATGCA TTGCTTGAAGTTTTTTCACACCCAGGGTTAGATGAGGATTCTTTCCAAGGTTTTAATGATATATTGTTGCGGTTGAGACTAAAGAGAAGTGAATGCCTTA CTATGTTGAAAAGAGTACGGGATTCTCTAAACCATCTGGATCTTCCAAGTGCTATGAACAAGCGGTCAATAGAGGAATTCTGTTTCCAGAAAGCAACCTT ATTTTTGTGCACAGCTTCTAGTTCGTATAAGTTGCATTTGTTGCCTATTGAACCACTGGACTTTTTGGTAGTTGACGAAGCAGCTCAGCTAAAAGAGTGT GAATCAACAATACCCCTACAACTTCCTGGTATTAGGCATGCTATTCTAATCGGTGATGAGTGTCAATTACCAGCTATGGTCAAAAGCAATGTTTGTGATA AAGCTGGCTTTGGAAGGAGTTTATTTGAAAGGCTCAGCTCATTGGGTCATTCAAAACATCTTTTAGATATGCAGTACAGAATGCATCCATCCATCAGTTG CTTCCCTAATTCAAAATTCTACTTCAATCAGATCTTAGATGCACCAAATGTCAAGGCTAGAAGTTATGAAAAGCATTATCTTCCAGGGCCAATGTTTGGT CCCTATACATTCATAAATGTATTTGGTGGAAGAGAAGAGCTAGATGATGTTGGGCATAGCAGGAAAAATATGGTTGAGGTAGCCCTTGTGCTGAAATTAC TGCGAAGTCTGTGCAAAGCATGGAGTGGACAAAAGGTTAGAGTTGGTGTAATATCTCCATACACTGCTCAAGTTGGTGTGATTCAAGAGAAGCTTGGTAA GAAGTATGAAAACATTGATGGTTTTTCAGTCAAGGTGAGTTCCATCGATGGATTTCAAGGTGCTGAAGAGGACATCGTAATAATATCAACCGTGAGATCC AATACAGGTGGCGCAATTGGGTTCATGTCTGATCCTCGGAGAATTAATGTTGCTCTTACACGGGCTAGGCATTGTCTTTGGATTTTGGCGAATGAAAGAA CCCTATCAAATAGTGAATCTATTTGGGAAAAGTTAGTCCATGATGCTAAGGAACGCAATTGTTTCTTTAATGCTGATGAAGACAAGGATTTGGCCAAAGC CATTTTAGAAGTCAAGAAAGAGTTTGATCAGCTGGATGATTTGATTAAGGGAGACAGTGCACTATTCAGAAGTGCTAGATGGAAGGTTCTTTTCAGTGAA TACTTCAAAAAATCATTTGGCAAACTAGCATCAGTAAGAAAGAAGACACCTGTTCTGAACCTTCTACTGAAACTTTCCAGTGGCTGGCGTCCTAAGAAAA GGAGTGTGGACTTCATTTGCGGAAGCTCTTCTCAAATCTTGAAACAGTTCAAGGTTGAAGGACTTTATGTAATCTGTTCAATTGACATAGTGAAGGAAAT ATGCTACAAACAAGTTTTGAGGGTTTGGGATTTATTACCATTAGAAGATATTCCTATATTGGCTAAACGTCTAGAGGGCATCTTTGCGACGTACACTGAC GATTTTATCAGTCATTGCAATGAGAAATGTCTAGAGGGAGATCTGGAAGTTCCAAAAATTTGGACAACCTCTTTTGATATTCCCAGATATAAGAGTTGCA GCAAGAATGAAAAAAGAAGCAATTCAAATCCTGATGGTGCCTACTATGTAGAGAACTCAAAAGTGAGTGATAGTTTGTTGCTGATGAAGTTCTACCCATT ATCTCCTGGGGTCGCGAGCCACTTGCTTTCTGACCGTGATGGAAGAGAATTGGAGCTCCCATTTGAAGTGACTGATGACGAACTCGAGATAATCATATTC CAAAGAAGTACATTTATACTAGGACGATCAGGGACTGGTAAAACGACTGTTTTGACAATGAAGCTGTTTAAGAAAGAGGAACTATATTATACGGCAACAC AGGGATACTTAAATACTTCAAAGGACAGCAGCAGGAGAAACAATGTTGCTGATGACATTAAATCTGTTGGGGATGGTGTTGGAGATGCCAAAGAAACTGT CTTGCGTCAACTTTTTGTGACAGTCAGTCCAAAACTCTGTTATGCCATCAAGCATCATGTGATACAATTGAAAAGCGTTGTCTCTGGTGAAAAGTACTCA GCAGAATGGAGTTCAGTTGATATGGAAGATATTGATGATGCAGCACAATTCAAAGATATTCCAAACTCTTTCTTAGATATTCCTCCAAAGTCATACCCAC TTGTTATCACTTTCTTTAAATTTTTAATGATGCTTGATGGAACAGTGGGTAATTCGTACTTTGAAAGATTTTCTGACATGAGACAGCTTTTGCACGAAAA AGTGGGGAATTCAGGATCAATCTCAGCACAAACTCTTAAAAGAACAAAGGAGGTTAACTTCGAGAAGTTTTGTGCAGTTTATTGGCCACGTTTCAATGAA AAATTAAAAAAAAAGCTTGATTCATCCAGAGTATTTACTGAGATAATTTCCCATATAAAAGGTGGCCTGCGAGCTGGAGAGTCTTGTGATGGCAGACTGA GCCGAGAGGATTATGTTATTCTGTCAGAAGGTCGAATATCCACTTTAAATAAGCAGCAGAGAGATTTAATATATGATATATTTGAAGGTTATGAAAAGAT GAAGGCAAAAAATGGTGACTTTGATATGGCTGATTTTGTAAATGATCTTCATCTTCGTCTTAAAACTTACAAGTATGAGGGTGATGTGATGGATTTTGTC TATATTGATGAAGTCCAAGATCTTACAATGAGGCAGATTGCTATCTTCAAATATATCTGTAGGAATGTAGATGAGGGATTTGTTTTTTGTGGTGATACAG CGCAAACAATTGCTAGGGGGATTGACTTTAGGTTTGAAGATATAAGATCTTTGTTCTATAAGGAGTTTGTTTTAGCATCAAGGAGTGCGGGAAATGACAG AAGGGAGAAAGGTCAAATATCTAAAATATTTCATTTGAACCAGAACTTCCGTACCCATGCTGGTGTGCTCAATTTAGCTCAGAGTGTTATTGATCTTCTT TACCGTTTTTTCCCTTCATTTATTGATGTCTTAAGCCATGAAACAAGTCTTGTTTATGGGGAAGCTCCTATTTTACTTGAATCTGGAAATGATGAAAATG CAATTGTAACTATTTTCGGGAATAGTGGGAATGTGAGAAGCAATTTTGTTGGGTTTGGAGCAGAGCAGGTGATATTGGTACGGGATGATGCTGCTAGGAA AGAGATTGATAACTATGTTGGGAAGCATGCTCTTGTTTTGACTGTTGTAGAGTGCAAGGGCCTGGAATTTCAGGATGTCCTCTTGTACAACTTTTTTGGC TCATCACCTTTGAAAAATAAATGGAGAGTTGTCTATGAGTTTATGAAGGAACAAGATTTACTTGATGCCACTTCCCCATCCTGTCCAAGTTTCATCCCAG CAAAACATAATGTCTTGTGCTCTGAGTTGAAGCAATTATACGTTGCTATCACTCGTACACGGCAAAGGTTGTGGATTTGTGAGAATGTGGAGGAGTTCTC CAGACCTATGTTTGACTACTGGATGAAGAAGGGCCTTGTCCAAGTGAGGAAACTGGATGATTCGCTTGCCCAAGCAATGCAAGTTTCTAGCAGTCCTGAA GAGTGGAAGTCTCAGGGTTACAAGCTTTTAAGTGAGGGTAACTATGAGATGGCAGCTATGTGCTTTGAAAGAGCAAGGGATGAACGTGGGGAGAAACTGT CCAAGGCTGCTGGGCTTAAAGCAGCTGCTGACAGAATGCATAGTTCAAATCCTGAAATGGCTTCCGTTGCCCGTAGGCAGGCTGCAGAAATTTTTGAATC AATAGGCAAGGCTGAGTATGCTGCCGAATGCTTTTACATGTTGAAGGAGTATGATAGGGCAGGTAGGATTTACTTGCAATGTGGGGAATCTGCAATGGAA AGAGCTGGAGAATGTTTTTTTCTTGCTGAAAATTATTGTTCTGCAGCTGAAGTATATGCAAAAGGCTGCAATTTCTCCAAGTGCTTGTCTGCATGTACCA AAGGAAAACTCTTCGACACAGGCTTGCATTATATACAGTACTGGAAACAACAGGGGACTGCAGATCAAAGAAGCAGAGAAATGGATACAATTGAACAAGA GTTTCTGGAAAGCTGTGCTTGTCATTATTACGAGCTCAATGACAACAGAGCCATGATGACATATGTTAGAGCTTTTGATTCCATGTCTTCAGCTCGTACT TTCTTGACTAATTTAGGGTGCCTTGATGAGCTTTTTTCATTGGAAGTGGAATCAGGTAACTTCCTGGAAGCGGCGGGCATTGCGAAGCAGAAAGGTGAGC TTGTCCTTGAGGCAGATCTACTGGGCAAGGGTGGACATTTTAAGGAGGCATCATTGCTTATTCTATGGTTTGTGTTTGCAAACTCTCTGTGGTCAACTGG GAGCAAAGGCTGGCCTTTAAAGCAGTTTCTTCAGAAAGAGGAACTTTTGGCAAAAGCTAAGTTACTTGCAAAGGATGTGTCAGACCAGTTTTATGAGTTT GTTCACACAGAGGCTGAAATTTTATTGAATAGCCAGCACAACTTATTCAAGATCCATCAAAGTCTAGAATCTTCTCGGAGACATATTAGTATCAGAGGTG AAATATTATTAGCTCGAAAGATTCTGGACATGCATCTTCATTTAAATACCTCAAAGTATTGGTGGGAAAATGACTTAGTGTCTGATTTAGAAAAGTTGTC AGAAAGAAACTTTTTGAACAACCAGGTCTCTGCTGAGACACTTGTTTACTTTTGGAATTTTTGGAAGGATAAGATTGTGAACATATTCAAGTTTCTTGGA CGTCTTGAAAGGCAAGATGTAACTGAATATGGAGATTTTGGTGAATTCTGCTTGAATTACTTGGGCGTGAAGAGACAGTTTAATAATCTGAACACTATTT ATTTTCTGATGATCTCGGATGCTCAGTGGGTGAGGGACATACCCAGAAAATTTATTCAAAGGAAGGGGAACTTGGTTTCTGTAGATGTTCATCAGTTTGT CACTGCTGCTCAGGGTTATTGGTGTTTGGAATTGCTTTCTGTTGGCATGAATGTATTAACCAATCTTGAAGCCCTTTACAATTTATCAGTTAGGAATTCC TTGTCCCTCTTCTGCCAAAGCAGGTCTCTTACTCATATATATGAGGTGGCAAACTTTCTTTTGAATTGCCAGTTTCTTAGTATTGAACACGGTGATATCA GGGCACTGCGGAAATTCACTCGACTGGCAACTGGATGCTTCTATGATTGCATCTATCCTAGGGACTGGAGAGAATCACTGAAAGAGAATATGATTTCGTT GAGGAGAACTGAGATTTGTAGGAATTTACTCAAGGAAGTTATCTTTGAAGATGTGAGCTCAAAGAACAACCTGTCTTATGCGCAACTTGAGAACAATCTG TCTTATGCGCAGCTTGGAAGGATCGCATCGATGATTCTTGGTTCTGGTGAGATGTTATGTGAACCATATGAGAAGATGGCAGACGGTTTACAATGGAATT CTTCATGGAAGGCATTCATTGAGGATCTCTGTAGGAATGTGAGCGAGGTGTCCTATATGTGGAAGTTGCATGAAGCTCTAGTAGATACTTATAATGCCAA CTGGAGGAAAGTAGATTATATCTTGCCTGGTTGTTTCTTATACATGCTTGAACGCCAACTAATTTTGTTATCCTACTTCCAAGGCTATTGTTTTACAACA AAGTCTTCTTTTGTGGAATGGCTTATCTACCAAGAAGGCCATGGGAGTCCAACTTTTGAAAGTTGGACGGGACTTGCACCCCAATCTACAGAAAGCATCC TAAAGTTTGTTGTTGACACTGTTCAGCTGTTGCTTTATAATGAGAAGGATATGATGGAGTGGATAAGAGTATCAGAAAAGAACGTGAAGGTCCTGAATGA CTACCATGCTGTAGTAGTGTTGAGATTGGTTGTCATAATATGTTTAATTTATGTAAACTTTGGATGGTGTGAAGGCTTGCTTTCTGACTTGCTGGGTAGG ACGTATATCACCAAAAAACTGCCAAGTCAGTTTTATGATGCCATCCGGAAGAGGCAGAAACATAATTCTCTGAATGTAAATCCAACTGTGGTAGCTGAAG CATTTAGCAAGATTGGCAATCCTCTGGTAGTTGTGAGTTTTGGTAAAAATTGCTCAGGATTTTTATGTCCAGATGCTATTTTTGTGGACATGAAGGTCAA TGAAAGCAAAGACAACGTATTAAGAGTCTTGTTTGCAAAGACTGATGCTACAGCTCAGCATCACACGGGAGCTGTTGAAGCAAACACTAGGAGCTCATTC AAAGGAATAGTGTCTCAGGGCATTGAAGATCTGGGGAAGATAAATGAGCTTCCATCTAATGTTGGAGACACGGCTAACTGGAACTCGAGTTGTGGGAAGA AGGATGAGGGTAACCCTCCATTGAGCCATGACCGGCTTTGGGAAATATTTGAAGCACTAAAATCTCCGACCCATGGAGTAGATGAAAGAAGCAAAATTGC ATGTGATCCAACATTTAAGGTAGATATAGACAGAATTTCTTGCCTTGTAAAAGCAGCAATTGATGAGAATTTTCAGAACCCTCCCGGTGTTGATAATAAA AACCTGCTTGAGGAAGCTTCCACCATGCTTCACGAAATGGGGCAACTTAATGCTGCATTAGAAATGAGGGAACCAGAACATGAGAGCGACATTTCTACAA TTGGAGAACTTCTCGAGAAGCTGCTGTCAAGAAGGCCCAGAATGGAATTTTTTCTAAGCCAGATATTCTTGCAACACGATGAAAATCTTAAAAAAGAGAT GTCAGAGAGAAACATTGCGTCAGATGGCCAACGTGATGAGGAATGTAATAACAGCAAGGCTGAGGGGAGTTGCGTTTCTGCTAAAGTTGAGATAAACATT ACACAGAATAATGTTGAAACCGGAAACAGCAATCCTGATATATAG
AA sequence Show only first row Show all	>Potri.008G142960.1 pacid=42808092 polypeptide=Potri.008G142960.1.p locus=Potri.008G142960 ID=Potri.008G142960.1.v4.1 annot-version=v4.1 MMERSESSSKMMKKKEITNDHGFVDTIFSWSLEDIFNENLFKVENIPESYYSVEHYLGSYVIPLLEETRAQLSSSMDIISRAPFAEMVAFFEAKPQGTLL YDVNIDYWRNRFRGSGNEHYKTLPGDIVILTSAKPENVSDLQRVGWTWTFAVVTSITGDETEDAATYTSFTVKAQKDIEISDGLQKSLTVISLTNITTSK RIWNALHMFGNLNIIKEILCTDSVVEENCNQYSMWERAIYDENVVNLSSKLNESQSKAVLACLLKKQRNHKSAVELIWGPPGTGKTKTVSMLLFSLLKMK CRTLTCGPTNVSITEVASRVLKLVTESHEADSGTDSLFHSVGEILLFGNKDRLKVDSETQEVYLDYRVKRLIECFAPLTGWRNCFNSTIDFFEDCVSQYA IFVENELIKMQEHDDENEEKRESCSYQAVALKGELKTFLEFMRDRFRSTVLPLKRCLTLLCTHIPETCILKHNIQNIVYLFGSLNSFESWLFPEGVISDA LLEVFSHPGLDEDSFQGFNDILLRLRLKRSECLTMLKRVRDSLNHLDLPSAMNKRSIEEFCFQKATLFLCTASSSYKLHLLPIEPLDFLVVDEAAQLKEC ESTIPLQLPGIRHAILIGDECQLPAMVKSNVCDKAGFGRSLFERLSSLGHSKHLLDMQYRMHPSISCFPNSKFYFNQILDAPNVKARSYEKHYLPGPMFG PYTFINVFGGREELDDVGHSRKNMVEVALVLKLLRSLCKAWSGQKVRVGVISPYTAQVGVIQEKLGKKYENIDGFSVKVSSIDGFQGAEEDIVIISTVRS NTGGAIGFMSDPRRINVALTRARHCLWILANERTLSNSESIWEKLVHDAKERNCFFNADEDKDLAKAILEVKKEFDQLDDLIKGDSALFRSARWKVLFSE YFKKSFGKLASVRKKTPVLNLLLKLSSGWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDIVKEICYKQVLRVWDLLPLEDIPILAKRLEGIFATYTD DFISHCNEKCLEGDLEVPKIWTTSFDIPRYKSCSKNEKRSNSNPDGAYYVENSKVSDSLLLMKFYPLSPGVASHLLSDRDGRELELPFEVTDDELEIIIF QRSTFILGRSGTGKTTVLTMKLFKKEELYYTATQGYLNTSKDSSRRNNVADDIKSVGDGVGDAKETVLRQLFVTVSPKLCYAIKHHVIQLKSVVSGEKYS AEWSSVDMEDIDDAAQFKDIPNSFLDIPPKSYPLVITFFKFLMMLDGTVGNSYFERFSDMRQLLHEKVGNSGSISAQTLKRTKEVNFEKFCAVYWPRFNE KLKKKLDSSRVFTEIISHIKGGLRAGESCDGRLSREDYVILSEGRISTLNKQQRDLIYDIFEGYEKMKAKNGDFDMADFVNDLHLRLKTYKYEGDVMDFV YIDEVQDLTMRQIAIFKYICRNVDEGFVFCGDTAQTIARGIDFRFEDIRSLFYKEFVLASRSAGNDRREKGQISKIFHLNQNFRTHAGVLNLAQSVIDLL YRFFPSFIDVLSHETSLVYGEAPILLESGNDENAIVTIFGNSGNVRSNFVGFGAEQVILVRDDAARKEIDNYVGKHALVLTVVECKGLEFQDVLLYNFFG SSPLKNKWRVVYEFMKEQDLLDATSPSCPSFIPAKHNVLCSELKQLYVAITRTRQRLWICENVEEFSRPMFDYWMKKGLVQVRKLDDSLAQAMQVSSSPE EWKSQGYKLLSEGNYEMAAMCFERARDERGEKLSKAAGLKAAADRMHSSNPEMASVARRQAAEIFESIGKAEYAAECFYMLKEYDRAGRIYLQCGESAME RAGECFFLAENYCSAAEVYAKGCNFSKCLSACTKGKLFDTGLHYIQYWKQQGTADQRSREMDTIEQEFLESCACHYYELNDNRAMMTYVRAFDSMSSART FLTNLGCLDELFSLEVESGNFLEAAGIAKQKGELVLEADLLGKGGHFKEASLLILWFVFANSLWSTGSKGWPLKQFLQKEELLAKAKLLAKDVSDQFYEF VHTEAEILLNSQHNLFKIHQSLESSRRHISIRGEILLARKILDMHLHLNTSKYWWENDLVSDLEKLSERNFLNNQVSAETLVYFWNFWKDKIVNIFKFLG RLERQDVTEYGDFGEFCLNYLGVKRQFNNLNTIYFLMISDAQWVRDIPRKFIQRKGNLVSVDVHQFVTAAQGYWCLELLSVGMNVLTNLEALYNLSVRNS LSLFCQSRSLTHIYEVANFLLNCQFLSIEHGDIRALRKFTRLATGCFYDCIYPRDWRESLKENMISLRRTEICRNLLKEVIFEDVSSKNNLSYAQLENNL SYAQLGRIASMILGSGEMLCEPYEKMADGLQWNSSWKAFIEDLCRNVSEVSYMWKLHEALVDTYNANWRKVDYILPGCFLYMLERQLILLSYFQGYCFTT KSSFVEWLIYQEGHGSPTFESWTGLAPQSTESILKFVVDTVQLLLYNEKDMMEWIRVSEKNVKVLNDYHAVVVLRLVVIICLIYVNFGWCEGLLSDLLGR TYITKKLPSQFYDAIRKRQKHNSLNVNPTVVAEAFSKIGNPLVVVSFGKNCSGFLCPDAIFVDMKVNESKDNVLRVLFAKTDATAQHHTGAVEANTRSSF KGIVSQGIEDLGKINELPSNVGDTANWNSSCGKKDEGNPPLSHDRLWEIFEALKSPTHGVDERSKIACDPTFKVDIDRISCLVKAAIDENFQNPPGVDNK NLLEEASTMLHEMGQLNAALEMREPEHESDISTIGELLEKLLSRRPRMEFFLSQIFLQHDENLKKEMSERNIASDGQRDEECNNSKAEGSCVSAKVEINI TQNNVETGNSNPDI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G65810			P-loop containing nucleoside t...		Potri.008G142960 [exp]	0	1
AT5G27370			Protein of unknown function (D...		Potri.013G027200 [exp]	5.29	0.9290
AT1G54070			Dormancy/auxin associated fami...		Potri.001G164800 [exp]	7.41	0.9256
AT1G47960		ATC/VIF1, C/VIF...	cell wall / vacuolar inhibitor...		Potri.010G063000 [exp]	10.58	0.9218
AT5G63380			AMP-dependent synthetase and l...		Potri.015G092300 [exp]	12.32	0.9286
AT5G21090			Leucine-rich repeat (LRR) fami...		Potri.003G166200 [exp]	12.56	0.9415
AT1G75820		ATCLV1, FLO5, F...	FLOWER DEVELOPMENT 5, FASCIATA...		Potri.005G241500 [exp]	13.96	0.9218	CLV1.2
AT5G63710			Leucine-rich repeat protein ki...		Potri.019G001800 [exp]	15.16	0.9087
AT5G65140		TPPJ	trehalose-6-phosphate phosphat...		Potri.007G090900 [exp]	16.24	0.9320
AT1G51120	AP2_ERF		AP2/B3 transcription factor fa...		Potri.006G186301 [exp]	24.97	0.9345
					Potri.002G056400 [exp]	28.46	0.8982

Compare expression of checked genes

Potri.008G142960 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.