Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G65810 679 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) AT1G65780 643 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37150 574 / 3e-179 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G52090 522 / 2e-163 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37160 519 / 1e-159 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37140 506 / 1e-157 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G05540 504 / 7e-157 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37030 356 / 2e-106 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G19120 196 / 5e-50 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G30100 188 / 2e-47 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G142960 [exp] 5432 / 0 AT1G65810 683 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.008G143450 [exp] 5380 / 0 AT1G65810 694 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140200 [exp] 775 / 0 AT1G65780 816 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G140501 [exp] 763 / 0 AT1G65780 798 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077700 [exp] 761 / 0 AT1G65810 818 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140601 [exp] 747 / 0 AT1G65780 777 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077650 [exp] 746 / 0 AT1G65810 559 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.004G077800 [exp] 740 / 0 AT1G65780 719 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077600 [exp] 709 / 0 AT1G65810 843 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035776 [exp] 2663 / 0 AT1G65810 633 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10013768 [exp] 1095 / 0 AT1G65780 69 / 4e-11 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035775 [exp] 811 / 0 AT5G37150 561 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035774 [exp] 788 / 0 AT1G65810 541 / 7e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10037353 [exp] 762 / 0 AT1G65810 543 / 2e-177 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10033462 [exp] 202 / 1e-51 AT4G30100 1589 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10039165 [exp] 177 / 6e-50 ND / Lus10035717 [exp] 179 / 3e-44 AT1G16800 1196 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10011054 [exp] 177 / 3e-44 AT5G47010 1977 / 0.0 LOW-LEVEL BETA-AMYLASE 1, RNA helicase, putative (.1) Lus10015030 [exp] 174 / 9e-44 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00580 [poplar] [flax] UvrD-helicase UvrD/REP helicase N-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF13361 [poplar] [flax] UvrD_C UvrD-like helicase C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.008G143000.1 pacid=42806185 polypeptide=Potri.008G143000.1.p locus=Potri.008G143000 ID=Potri.008G143000.1.v4.1 annot-version=v4.1 ATGATGGAAAGATCAGAGAGTTCAAGCAAGATGATGAAGAAGAAAGAAATTCCTAATGATCGTGGCTTCGTTGACACCATTTTTTCATGGTCTCTTGAGG ATATTTTCAATGAAAATCTTTTCAAGGTGGAAAATATTCCAGAGTCATATTACTCGGTTGAGCATTATCTTGGATCATATGTAATTCCTTTGTTGGAAGA AACCCGTGCACAATTGAGCTCAAGCATGGATATTATATCCAGAGCACCGTTTGCTGAAATGGTTGCTTTCTTTGAGGCCAAGCCCCACGGCACATTATTG TATGATGTTAATATTGATTATTGGAGAAACAGATCCCGTGGCAGTGGCAAGGAGCATTACAAAACATTGCCCGGCGACATCGTTATTTTAACAAGCGCTA AACCTGAAAATGTCTCTGATTTGCAAAGGGTTGGATGGACATGGACATTTGCTGTGGTCACCAGTATAACAGGAGATGAGACCGAGGATGCTGCTACATA TACTTCTTTCACAGTCAAGGCGCAAAAAGAAATTGAAATTAGTGATGGACTGCAGAAATCACTTACTGTGTTTTCATTGACTAATATAACAACTAGCAAA AGAATATGGAATGCACTCCACATGTTCGGAAACTTGAATATCATCAAAGAGATTCTGTGCACTGATTCTGTGGTTGAGGAAAATTGCAACCAATATTCTA TGTGGGAACGTGCAATCTATGATGAGAATGTTGTGAATCTGTCATCTAATCTGAATGAATCCCAAAGCAAGGCGGTTTTGGCATGTCTGCTTAAAAAGCA ACGCAACCATAAGTCGGCAGTTGAACTTATTTGGGGCCCGCCAGGGACCGGGAAAACCAAAACAGTCAGTATGTTGCTCTTTAGCCTCCTAAAAATGAAA TGCAGAACTCTAACATGTGGCCCAACCAATGTTTCAATTACAGAAGTGGCCTCTAGGGTGCTCAAGCTGGTCACAGAATCCCATGAAGCAGATTCAGGAA CGTATTCTTTGTTTCATTCTGTGGGAGATATTCTTCTGTTTGGGAATAAGGACAGACTCAAAGTTGATTCTGAAACTCAGGAAGTCTATTTGGATTATCG TGTCAAAAGGCTTATAGAGTGCTTTGCGCCTCTGACTGGTTGGAGGAATTGTTTCAACTCGACAATTGATTTTTTTGAAGATTGTGATTCTCAGTATGCC ATTTTCGTGGAGAATGAATTAATCAAAATGCAGGAGCATGATGATGAAAATGAAGAGAAAAGGGAATCCTGTAGCTATCAAGCTGTTGCCCTCAAAGGAG AGCTTAAAACGTTTCTCGAATTTATGAGAGATAGATTCCGCTCTACTGCAGTACATCTAAAAAGATGCCTCACTTTATTATGCACTCACATACCAGAAAC TTGCATTCTCAAACATAACATTCAGAACATCGTATCCTTGTTTGGGTCACTTAACTCTTTTGAATCTTGGCTATTCCATGAGGATGTGATTTCTGATGAA TTGCTTGAAGTTTTTTCACACCCAGGGTTAGATGAGGATTCTTCCCAAGGTTTTAATGATATATTGTTGCAGTTGAGACTTAAGAGAAGTGAATGCCTTA CTAGGTTGAAAAGAGTCTGGGATTCTCTCCGCCATCTGGATCTTCCAAGTGCTATGAACAAGCGGTCAATAGAGGAATTCTGTTTCCAGAAAGCAACCTT ATTTTTGTGCACAGCTTCTAGTTCGTATAAGTTGCATTTGTTGCCGATTGAACCACTGGACTTTTTGGTAGTTGACGAAGCAGCTCAGCTAAAAGAGTGT GAATCAACAATACCCCTACAACTTCCTGGTATTAGGCATGCTATTCTAATCGGTGACGAGTGTCAATTACCAGCTATGGTCGTAAGCAATGTTTGTGATA AAGCTGGCTTTGGAAGGAGTTTATTTGAAAGGCTCAGCTCATTGGGTCATTCAAAACATCTTTTAGATATGCAGTACAGAATGCATCCATCCATCAGTTG CTTCCCTAATTCAAAATTCTACTTCAGTCAGATCTTAGATGCACCAAATGTCAAGGCTAGAAGTTATGAAAAGCATTATCTCCCAGGGCCAATGTTTGGT CCCTATACATTCATAAATGTATTTGGTGGAAGAGAAGAGCTAGATGATGTTGGGCATAGCAGGAAAAATATGGTTGAGGTAGCCATTGTGCTGAAATTAC TGCGAAGTCTGTACAAAGCATGGAGTGGACAAAAGGTTAGAGTTGGTGTAATATCTCCATATACTGCTCAAGTTGGTGCGATTCAAGAGAAGCTTGGTAA GAAGTATGAAACCATTGATGGTTTTTCAGTGAAGGTGAGTTCAATCGATGGATTTCAAGGTGGTGAAGAGGACATCGTAATAATATCAACCGTGAGATCC AATACAGGTGGAGCAATTGGGTTCATGTCTGATCCTCGGAGAATTAATGTTGCTCTTACAAGGGCTAGGCATTGTCTTTGGATTTTGGGGAATGAAAGAA CCCTATCAAATAGTGAATCCATTTGGGAAAAGTTAGTCCATGATGCTAAGGAACGCAGTTGTTTCTTTCATGCTGATGAAGACAAGGATTTGGCCAAAGC CATTTTAGAAGTCAAGAAAGAGTTTGATCAGCTTGATGATTTGATTAAAGGAGACAGTGCACTATTCAGAAGTGCTAGATGGAAGGTTCTTTTCAGTGAA TACTTCAAAAAGTCATTTGGCAAACTAGCATCAGTCAGAAAGAAGACACCTGTTCTGAACCTTCTACTGAAACTTTCCAGTGGCTGGCGTCCTAAGAAAA GGAGTGTGGACTTCATTTGCGGAAGCTCTTCTCAAATCTTGAAACAGTTCAAGGTTGAAGGACTGTATGTAATCTGTTCAATTGACATAGTGAAGGAAAT ATGCTACACACAAGTTTTGAAGGTTTGGGATTTATTAGCATTAGAAGATATTCCTATACTGGCTAAACGTCTAGAGGGCATCTTTGAGACATATACTGAT GATTTTATCAGTCATTGCAATGAAAAATGTCTAGAGGGAGATCTGGAAGTTCCAAAAACTTGGAGAACCTCATTTGATATTCCCAGATATAAGAGTTGCA GCAATAATGAAATAAGAAGCAATTCAAATTCTGGTGGTCCTGATGGTCCCTACTATGTAGAGAACTCAAAAGTGAGTGATAGTTTGTTGCTGATGAAGTT CTACTCATTATCTTCTGGGGTCGTGAGCCACTTGCTTTCTGACCGTGATGGAAGAGAATTGGAGCTCCCATTTGAAGTGACTGATGAGGAACTCGAGATA ATCATATTCCAAAGAAGTACATTTATACTAGGACGATCAGGGACTGGTAAAACGACTGTTTTGACAATGAAGCTGTTTAAGAAAGAGGAACTATATTATA CGGCAACACAGGGATACTTAAATACTTCAAAGGACAGCAGCAGGAGAAACAATGTTGCTGATGACATTAAATCTGTCGGGGATGGTGTTGGAGATGCCAA AGAAACTGTCTTGCGTCAACTTTTTGTGACAGTCAGTCCAAAACTCTGTTATGCCATCAAGCATCATGTGATACAATTGAAAAGCTTTGCCTCTGGTGGA AAATACTCAGCAGAAGGGAGTTCAGTTGATATGGAAGATATTGATGATGCAGCACAATTCAAAGATATTACAAACTCTTTTTTAGATATTCCTCAAAAGT CATACCCACTTGTTATCACTTTCTTTAAATTTTTAATGATGCTTGATGGAACAATGGGTAATTCGTACTTTGAAAGATTTTCTGACATGAGGCAGCTTTT GCATGAAAAAGTAGGGAATTCAGGATCAATCTCAGCACAAACTCTTATAAGAACAAATGAGGTTAACTTCGAGAAGTTTTGTGCAGTTTATTGGCCACGT TTCAATGAAAAATTAAAAAAAAAGCTTGATTCATCCAGAGTATTTACTGAGATAATTTCCCATATAAAAGGTGGCCTGCGAGCTGGAGAGTCTTGTGATG GCAGACTGAGCCGAGAGGATTATGTTATTCTGTCAGAAGGTTGTATATCCACTTTAAGTAGGCAGAAGAGAGATTTAATATATGATATTTTTGAAGACTA TGAAAAGATGAAGGCAGAAAATGGTGACTTTGATATGGCTGATTTTGTAAATGATCTTCATCTTCGTCTTAAAACTTACAAGTATGAGGGTGATGCGATG GATTTTGTCTATATTGATGAAGTCCAAGATCTTACAATGAGGCAGATTGCTCTCTTCAAATATATCTGTAGGAATGTAGATGAGGGATTTGTTTTTTCTG GTGATACAGCGCAAACAATTGCTAGGGGGATTGACTTTAGGTTTGAAGATATAAGATCTTTGTTCTATAAGGAGTTTGTTTTAGCATCAAGGAGTGCGGG AAATGACAGAAACGAGAAAGGTCGAATATCTAAAATATTTCATTTGAACCAGAACTTCCGTACCCATGCTGGTGTGCTCAATTTAGCTCAGAGTGTTATT GATCTTCTTTACCGTTTTTTCCCTTCATTTATTGATGCTTTAAGACATGAAACAAGTCTTATTTATGGGGAAGCTCCTATTTTACTTGAATCTGGAAATG ATGAAAATGCAATTGTAACTATTTTCGGGAATAGTGGGAATGTGAGAAGCAATTTTGTTGGGTTTGGAGCAGAGCAGGTGATATTGGTGCGGGATGATGC TGCTAAGAAAGAGATTGATAACTATGTTGGGAAGCATGCTCTTGTTTTGACTGTTGTAGAGTGCAAGGGCCTAGAATTTCAGGATGTCCTCTTGTACAAC TTTTTTGGCTCATCACCTTTGAAAAATAAATGGAGAGTTGTCTATGAGTTTATGAAGGAACAAGATTTACTTGATGCCAATTCCCCATCCTTTCCAAGTT TCATCCCAGCAAAACATAATGTCTTGTGCTCTGAGTTGAAGCAATTATACGTTGCTATCACTCGTACACGGCAAAGGTTGTGGATTTGTGAGAATGTGGA GGATTTCTCCAGACCAATGTTTGACTACTGGACGAAGAAGGGCCTTGTCCAAGTGAGGAAACTGGATGATTCGCTTGCCCAAGCAATGCAAGTTTCTAGC AGTCCTGAAGAGTGGAAGTCTCAGGGTTACAAGCTTTTACGTGAGGGTAACTATGAGATGGCAGCTATGTGCTTTGAAAGAGCAAGGGATGAACGTGGGG AGAAACTGTCCAAGGCTGCTGGGCTTAAAGCAGCTGCTGACAGAATGCATAGTTCAAATCCTGAAATGGCTTCCGTTGCCCGTAGGCAGGCTGCAGAAAT TTTTGAATCAATAGGCAAGGCTGAGTATGCTGCCGAATGCTTTTACATGTTGAAGGAGTATGATAGGGCAGGTAGGATTTACTTGCAATGTGGGGAATCT GCAATGGAAAGAGCTGGAGAATGTTTTTTTCTTGCTGAAAATTATTGTTCTGCAGCTGAAGTATATGCAAAAGGCTGCAATTTCTCCAAGTGCTTGTCTG CATGTACCAAAGGAAAACTCTTCGACACAGGCTTGCATTATATACAGTACTGGAAACAACAGGGGACTGCAGATCAAAGAAGCAGAGAAATGGATACAAT TGAACAAGAGTTTCTGGAAAGCTGTGCTTGTCATTATTACGAGCTCAATGACAACAGAGCCATGATGACATATGTTAGAGCTTTTGATTCCATGTCTTCA GCTCGTACTTTCTTGACTAATTTAGGGTGCCTTGATGAGCTTTTTTCATTGGAAGTGGAATCAGGTAACTTCCTGGAAGCGGCGGGCATTGCGAAGCAGA AAGGTGAGCTTGTCCTTGAGGCAGATCTACTGGGCAAGGGTGGACATTTTAAGGAGGCATCATTGCTTATTCTATGGTTTGTGTTTGCAAACTCTCTGTG GTCAACTGGGAGCAAAGGCTGGCCTTTAAAGCAGTTTCTTCAGAAAGAGGAACTTTTGGCAAAAGCTAAGTTACTTGCAAAGGATGTGTCAGACCAGTTT TATGAGTTTGTTCACACAGAGGCTGAAATTTTATTGAATAGCCAGCACAACTTATTCAAGATCCATCAAAGTCTAGAATCTTCTCGGAGACATATTAGTA TCAGAGGTGAAATATTATTAGCTCGAAAGATTCTGGACATGCATCTTCATTTAAATACCTCAAAGTATTGGTGGGAAAATGACTTAGTGTCTGATTTAGC AAAGTTGTCAGAAAGAAACTTTTTGAACAACCAGGTCTCTGCTGAGACACTTGTTTACTTTTGGAATTTTTGGAAGGATAAGATTGTGAACATATTCAAG TTTCTTGGACGTCTTGAAAGGCAAGATGTAACTGAATATGGAGATTTTGGTGAATTCTGCTTGAATTACTTGGGCGTGAAGAGACAGTTTAATAATCTGA ACACTATTTATTTTCTGATGATCTCGGATGCTCAGTGGGTGAGGGACATACCCAGAAAATTTATTCAAAGGAAGGGGAACTTGGTTTCTGTAGATGTTCA TCAGTTTGTCACTGCTGCTCAGGGTTATTGGTGTTTGGAATTGCTTTCTGTTGGCATGAATGTATTAACCAATCTTGAAGCCCTTTACAATTTATCAGTT AGGAATTCCTTGTCCCTCTTCTGCCAAAGCAGGTCTCTTACTCATATATATGAGGTGGCAAACTTTCTTTTGAATTGCCAGTTTCTTAGTATTGAACACG GTGATATCAGGGCACTGCGGAAATTCACTCGACTGGCAACTGGATGCTTCTATGATTGCATCTATCCTAGGGACTGGAGAGAATCACTGAAAGAGAATAT GATTTCGTTGAGGAGAACTGAGATTTGTAGGAATTTACTCAAGGAAGTTATCTTTGAAGATGTGAGCTCAAAGAACAACCTGTCTTATGCGCAACTTGAG AACAATCTGTCTTATGCGCAGCTTGGAAGGATCGCATCGATGATTCTTGGTTCTGGTGAGATGTTATGTGAACCATATGAGAAGATGGCAGACGGTTTAC AATGGAATTCTTCATGGAAGGCATTCATTGAGGATCTCTGTAGGAATGTGAGCGAGGTGTCCTATATGTGGAAGTTGCATGAAGCTCTAGTAGATACTTA TAATGCCAACTGGAGGAAAGTAGATTATATCTTGCCTGGTTGTTTCTTATACATGCTTGAACGCCAACTAATTTTGTTATCCTACTTCCAAGGCTATTGT TTTACAACAAAGTCTTCTTTTGTGGAATGGCTTATCTACCAAGAAGGCCATGGGAGTCCAACTTTTGAAAGTTGGACGGGACTTGCACCCCAATCTACAG AAAGCATCCTAAAGTTTGTTGTTGACACTGTTCAGCTGTTGCTTTATAATGAGAAGGATATGATGGAGTGGATAAGAGTATCAGAAAAGAACGTGAAGGT CCTGAATGACTACCATGCTGTAGTAGTGTTGAGATTGGTTGTCATAATATGTTTAATTTATGTAAACTTTGGATGGTGTGAAGGCTTGCTTTCTGACTTG CTGGGTAGGACGTATATCACCAAAAAACTGCCAAGTCAGTTTTATGATGCCATCCGGAAGAGGCAGAAACATAATTCTCTGAATGTAAATCCAACTGTGG TAGCTGAAGCATTTAGCAAGATTGGCAATCCTCTGGTAGTTGTGAGTTTTGGTAAAAATTGCTCAGGATTTTTATGTCCAGATGCTATTTTTGTGGACAT GAAGGTCAATGAAAGCAAAGACAACGTATTAAGAGTCTTGTTTGCAAAGACTGATGCTACAGCTCAGCATCACACGGGAGCTGTTGAAGCAAACACTAGG AGCTCATTCAAAGGAATAGTGTCTCAGGGCATTGAAGATCTGGGGAAGATAACTGAGCTTCCATCTAATGTTGGAGACACGGCTAACTGGAACTCGAGGT GTGGGAAAAAGGATGAGGGTAACCCTCCATTGAGCCATGACCGGCTTTGGGAAATATTTGAAGCACTAAAATCTCCGACCCATGGAGTAGATGAAAGAAG CAATATTGCATGCGATCCAACATTTAAGGTGGATATAGACAGAATTACTTGCCTTTTAAAAGCAGCAATTGATGGAAATTTTCAGAACCCTCCCAGTGTT GATAATAAAAACCTGCTTGAGGAAGCTTCCACCATGCTTCACGAATTGGGGCAACTTAATGCTGCATTAGAAATGAGGGAACCAGAACATGAGAGCGACA TTTCTACAATTGGAGAACTTCTCGAGAAGCTGCAGTCAAGAAGGCCAAGAATGGAATTTTTCCTAAGCCAGATATTCTTGCAACACGATGAAAATCATAA AAGAGAGATGTCAGAGAGAAACATTGCATCAGATGGCCAACGTGATGAGGAACATAGTAACAGCAAGGCTGAGGGGAGTTGCGTTTCTGTTAAAGGTGAG ATAAACATTTCACGGAGTAATGTTGAAACCGGAGGTAGAAACCCTGATACGGAGAACAAGGGGAAGGGAAACAGCAAGTCCAAGAAAAACAAGAAGGGAA AAGGAGGGCGGAAACGCAAGTAG
AA sequence Show only first row Show all	>Potri.008G143000.1 pacid=42806185 polypeptide=Potri.008G143000.1.p locus=Potri.008G143000 ID=Potri.008G143000.1.v4.1 annot-version=v4.1 MMERSESSSKMMKKKEIPNDRGFVDTIFSWSLEDIFNENLFKVENIPESYYSVEHYLGSYVIPLLEETRAQLSSSMDIISRAPFAEMVAFFEAKPHGTLL YDVNIDYWRNRSRGSGKEHYKTLPGDIVILTSAKPENVSDLQRVGWTWTFAVVTSITGDETEDAATYTSFTVKAQKEIEISDGLQKSLTVFSLTNITTSK RIWNALHMFGNLNIIKEILCTDSVVEENCNQYSMWERAIYDENVVNLSSNLNESQSKAVLACLLKKQRNHKSAVELIWGPPGTGKTKTVSMLLFSLLKMK CRTLTCGPTNVSITEVASRVLKLVTESHEADSGTYSLFHSVGDILLFGNKDRLKVDSETQEVYLDYRVKRLIECFAPLTGWRNCFNSTIDFFEDCDSQYA IFVENELIKMQEHDDENEEKRESCSYQAVALKGELKTFLEFMRDRFRSTAVHLKRCLTLLCTHIPETCILKHNIQNIVSLFGSLNSFESWLFHEDVISDE LLEVFSHPGLDEDSSQGFNDILLQLRLKRSECLTRLKRVWDSLRHLDLPSAMNKRSIEEFCFQKATLFLCTASSSYKLHLLPIEPLDFLVVDEAAQLKEC ESTIPLQLPGIRHAILIGDECQLPAMVVSNVCDKAGFGRSLFERLSSLGHSKHLLDMQYRMHPSISCFPNSKFYFSQILDAPNVKARSYEKHYLPGPMFG PYTFINVFGGREELDDVGHSRKNMVEVAIVLKLLRSLYKAWSGQKVRVGVISPYTAQVGAIQEKLGKKYETIDGFSVKVSSIDGFQGGEEDIVIISTVRS NTGGAIGFMSDPRRINVALTRARHCLWILGNERTLSNSESIWEKLVHDAKERSCFFHADEDKDLAKAILEVKKEFDQLDDLIKGDSALFRSARWKVLFSE YFKKSFGKLASVRKKTPVLNLLLKLSSGWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDIVKEICYTQVLKVWDLLALEDIPILAKRLEGIFETYTD DFISHCNEKCLEGDLEVPKTWRTSFDIPRYKSCSNNEIRSNSNSGGPDGPYYVENSKVSDSLLLMKFYSLSSGVVSHLLSDRDGRELELPFEVTDEELEI IIFQRSTFILGRSGTGKTTVLTMKLFKKEELYYTATQGYLNTSKDSSRRNNVADDIKSVGDGVGDAKETVLRQLFVTVSPKLCYAIKHHVIQLKSFASGG KYSAEGSSVDMEDIDDAAQFKDITNSFLDIPQKSYPLVITFFKFLMMLDGTMGNSYFERFSDMRQLLHEKVGNSGSISAQTLIRTNEVNFEKFCAVYWPR FNEKLKKKLDSSRVFTEIISHIKGGLRAGESCDGRLSREDYVILSEGCISTLSRQKRDLIYDIFEDYEKMKAENGDFDMADFVNDLHLRLKTYKYEGDAM DFVYIDEVQDLTMRQIALFKYICRNVDEGFVFSGDTAQTIARGIDFRFEDIRSLFYKEFVLASRSAGNDRNEKGRISKIFHLNQNFRTHAGVLNLAQSVI DLLYRFFPSFIDALRHETSLIYGEAPILLESGNDENAIVTIFGNSGNVRSNFVGFGAEQVILVRDDAAKKEIDNYVGKHALVLTVVECKGLEFQDVLLYN FFGSSPLKNKWRVVYEFMKEQDLLDANSPSFPSFIPAKHNVLCSELKQLYVAITRTRQRLWICENVEDFSRPMFDYWTKKGLVQVRKLDDSLAQAMQVSS SPEEWKSQGYKLLREGNYEMAAMCFERARDERGEKLSKAAGLKAAADRMHSSNPEMASVARRQAAEIFESIGKAEYAAECFYMLKEYDRAGRIYLQCGES AMERAGECFFLAENYCSAAEVYAKGCNFSKCLSACTKGKLFDTGLHYIQYWKQQGTADQRSREMDTIEQEFLESCACHYYELNDNRAMMTYVRAFDSMSS ARTFLTNLGCLDELFSLEVESGNFLEAAGIAKQKGELVLEADLLGKGGHFKEASLLILWFVFANSLWSTGSKGWPLKQFLQKEELLAKAKLLAKDVSDQF YEFVHTEAEILLNSQHNLFKIHQSLESSRRHISIRGEILLARKILDMHLHLNTSKYWWENDLVSDLAKLSERNFLNNQVSAETLVYFWNFWKDKIVNIFK FLGRLERQDVTEYGDFGEFCLNYLGVKRQFNNLNTIYFLMISDAQWVRDIPRKFIQRKGNLVSVDVHQFVTAAQGYWCLELLSVGMNVLTNLEALYNLSV RNSLSLFCQSRSLTHIYEVANFLLNCQFLSIEHGDIRALRKFTRLATGCFYDCIYPRDWRESLKENMISLRRTEICRNLLKEVIFEDVSSKNNLSYAQLE NNLSYAQLGRIASMILGSGEMLCEPYEKMADGLQWNSSWKAFIEDLCRNVSEVSYMWKLHEALVDTYNANWRKVDYILPGCFLYMLERQLILLSYFQGYC FTTKSSFVEWLIYQEGHGSPTFESWTGLAPQSTESILKFVVDTVQLLLYNEKDMMEWIRVSEKNVKVLNDYHAVVVLRLVVIICLIYVNFGWCEGLLSDL LGRTYITKKLPSQFYDAIRKRQKHNSLNVNPTVVAEAFSKIGNPLVVVSFGKNCSGFLCPDAIFVDMKVNESKDNVLRVLFAKTDATAQHHTGAVEANTR SSFKGIVSQGIEDLGKITELPSNVGDTANWNSRCGKKDEGNPPLSHDRLWEIFEALKSPTHGVDERSNIACDPTFKVDIDRITCLLKAAIDGNFQNPPSV DNKNLLEEASTMLHELGQLNAALEMREPEHESDISTIGELLEKLQSRRPRMEFFLSQIFLQHDENHKREMSERNIASDGQRDEEHSNSKAEGSCVSVKGE INISRSNVETGGRNPDTENKGKGNSKSKKNKKGKGGRKRK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G65810			P-loop containing nucleoside t...		Potri.008G143000 [exp]	0	1
AT1G65810			P-loop containing nucleoside t...		Potri.008G143450 [exp]	1.41	0.8781
AT2G41140		CRK1, ATCRK1, A...	CDPK-related kinase 1 (.1)		Potri.016G035500 [exp]	3.00	0.8291	CRK1.2
AT5G66900			Disease resistance protein (CC...		Potri.007G039300 [exp]	3.87	0.8233
AT1G60670			Protein of unknown function (D...		Potri.008G145100 [exp]	6.32	0.8158
AT2G03500	GARP		Homeodomain-like superfamily p...		Potri.018G074200 [exp]	7.07	0.8365
AT3G60730			Plant invertase/pectin methyle...		Potri.002G145700 [exp]	8.48	0.8132
AT4G14030		SBP1	selenium-binding protein 1 (.1...		Potri.017G060000 [exp]	11.61	0.7681	SBP.2
AT4G02280		ATSUS3, SUS3	sucrose synthase 3 (.1)		Potri.002G202300 [exp]	11.66	0.7904	SUS2.2
AT4G16790			hydroxyproline-rich glycoprote...		Potri.003G079900 [exp]	15.74	0.8233
AT2G44830			Protein kinase superfamily pro...		Potri.002G137700 [exp]	18.16	0.8116

Compare expression of checked genes

Potri.008G143000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.