Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G65810 692 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) AT1G65780 662 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37150 584 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G52090 531 / 2e-166 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37160 529 / 3e-163 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37140 518 / 1e-161 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G05540 509 / 2e-158 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37030 353 / 1e-105 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G19120 195 / 1e-49 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G30100 188 / 2e-47 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G143000 [exp] 5429 / 0 AT1G65810 680 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.008G142960 [exp] 5370 / 0 AT1G65810 683 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140200 [exp] 788 / 0 AT1G65780 816 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G140501 [exp] 776 / 0 AT1G65780 798 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077700 [exp] 774 / 0 AT1G65810 818 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.004G077650 [exp] 758 / 0 AT1G65810 559 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.004G077800 [exp] 754 / 0 AT1G65780 719 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G140601 [exp] 751 / 0 AT1G65780 777 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.004G077600 [exp] 723 / 0 AT1G65810 843 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035776 [exp] 2742 / 0 AT1G65810 633 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10013768 [exp] 1120 / 0 AT1G65780 69 / 4e-11 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035775 [exp] 831 / 0 AT5G37150 561 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035774 [exp] 806 / 0 AT1G65810 541 / 7e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10037353 [exp] 781 / 0 AT1G65810 543 / 2e-177 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10033462 [exp] 199 / 8e-51 AT4G30100 1589 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10039165 [exp] 177 / 5e-50 ND / Lus10015030 [exp] 176 / 2e-44 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035717 [exp] 179 / 3e-44 AT1G16800 1196 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10011054 [exp] 177 / 4e-44 AT5G47010 1977 / 0.0 LOW-LEVEL BETA-AMYLASE 1, RNA helicase, putative (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00580 [poplar] [flax] UvrD-helicase UvrD/REP helicase N-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF13087 [poplar] [flax] AAA_12 AAA domain CL0023 [poplar] [flax] P-loop_NTPase PF13361 [poplar] [flax] UvrD_C UvrD-like helicase C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.008G143450.1 pacid=42806876 polypeptide=Potri.008G143450.1.p locus=Potri.008G143450 ID=Potri.008G143450.1.v4.1 annot-version=v4.1 ATGGATAATGCTTGTCTCTTTCTTTCTGCCTCCGTACTGCATTGTATAGTCAAGATAAACGAGAAATTGATGATGGAAAGATCAGAGAGTTCAAGCAAGA TGATGAAGAAGAAAGAAATTACTAATGATCATACCTTCGTTGACACCATTTTTTCATGGTCTCTTGAGGATATTTTCAATGAAAATCTTTTCAAGGTGGA AAATATTCCAGAGTCATATTACTCGGTTGAGCATTATCTTGGATCATATGTAATTCCTTTGTTGGAAGAAACCCGTGCACAATTGAGCTCAAGCATGGAT ATTATATCCAGAGCACCGTTTGCTGAAATGGTTGCTTTCTTTGAGGCCAAGCCCCACGGCACATTATTGTATGATGTTAATATTGATTATTGGAGAAACA GATCCCGTGGCAGTGGCAAGGAGCATTACAAAACATTGCCCGGCGACATCGTTATTTTAACAAGCGCTAAACCCGAAAATGTCTCTGATTTGCAAAGGGT TGGATGGACATGGACATTTGCTGTGGTCACCAGAATAACAGGAGATGAGACCGAGGATGCTGCTACATATACTTCTTTCACAGTCAAGGCGCAAAAAGAC ATTGAAATTAGTGATGGACTGCAGAAATCACTTACTGTGATTTCATTGACTAATATAACAACTAGCAAAAGAATATGGAATGCACTCCACATGTTCGGAA ACTTGAATATCATCAAAGAGATTCTGTGCACTGATTCTGTGGTTGAGGAAAATTGCAACCAATATTCTATGCGGGAACGTGCAATCTATGATGAGAATGT TGTGAATTTGTCATCTAAACTGAATGAATCCCAAAGCAAGGCGGTTTTGGCATGTCTGCTTAAAAAGCAAAGCAACCATAAGTCGGCAGTTGAACTTATT TGGGGCCCGCCAGGGACTGGGAAAACCAAAACAGTCAGTATGTTGCTCTTTAGCCTCCTAAAAATGAAATGCAGAACTCTAACATGTGGCCCAACCAATG TTTCAATTACAGAAGTGGCCTCTAGGGTGTTCAAGCTGGTCACAGAATCGCATGAAGCAGATTCAGGAACTGATTCTTTGTTTCATTCTGTGGGAGATAT TCTTTTGTTTGGGAATAAGGACAGACTCAAAGTTGATTCTGAAACTCAGGAGGTCTATTTGGATTATCGTGTCAAAAGGCTTATAGAGTGCTTTGCACCT CTGACTGGTTGGAGGAATTGTTTCAATTCGACAATTGATTTTTTTGAAGATTGTGTTTCTCAGTATGCCATTTTCGTGGAGAATGAATTAATCAAAATGC AGGAGCATGATGATGAAAATGAAGAGAAAAGGGAATCCTGTAGCTATCAAGCTGTTGCCCTCAAAGGAGAGCCTAAAACGTTTCTCGAATTTATGAGAGA TAGATTCCGCTCTACTGCATTACCTCTAAAAAGATGCCTCACTTTATTATGCACTCACATACCAGAAACTTGCATTCTCAAACATAACATTCAGAACATC GTATCCTTGTTTGGGTTACTTAACTCTTTTGAATCTTGGCTATTCCATGCGGCTGTGATTTCTGATGAAATGCATGAAGTTTTTTCACACCCAGAGTTAG ATGAGGATTCTTTCCAAGGTTTTAATGATATATTGTTGCGGTTGAGACTAAAGAGAAGTGAATGCCTTACTATGTTGAAAAGAGTACGGGATTCTCTCCG CCATCTGGATCTTCCAAGTGCTATGAACAAGCGGTCAATAGAGGAATTCTGTTTCCAGAAAGCAACCTTATTTTTGTGCACAGCTTCTAGTTCGTATAAG TTGCATTTGTTGCCTATTGAACCACTGGACTTTTTGGTAGTTGACGAAGCAGCTCAGCTAAAAGAGTGTGAATCAACAATACCCCTACAACTTCCTGGTA TTAGGCATGCTATTCTAATCGGTGATGAGTGTCAATTACCAGCTATGGTCAAAAGCAATGTTTGTGATAAAGCTGGCTTTGGAAGGAGTTTATTTGAAAG GCTCAGCTCATTGGGTCATTCAAAACATCTTTTAGATATGCAGTACAGAATGCATCCATCCATCAGTTGCTTCCCTAATTCAAAATTCTACTTCAATCAG ATCTTAGATGCACCAAATGTCAAGGCTAGAAGTTATGAAAAGCATTATCTTCCAGGGCCAATGTTTGGTCCCTATACATTCATAAATGTATTTGGTGGAA GAGAAGAGCTAGATGATGTTGGGCATAGCAGGAAAAATATGGTTGAGGTAGCCCTTGTGCTGAAATTACTGCGAAGTCTGTGCAAAGCATGGAGTGGACA AAAGGTTAGAGTTGGTGTAATATCTCCATACACTGCTCAAGTTGGTGCGATTCAAGAGAAGCTTGGTAAGAAGTATGAAAACATTGATGGTTTTTCAGTG AAGGTGAGTTCAATCGATGGATTTCAAGGTGGTGAAGAGGACATCGTAATAATATCAACCGTGAGATCCAATACAGGTGGAGCTATTGGGTTCATGTCTG ATCCTCGGAGAATTAATGTTGCTCTTACAAGGGCTAGGCATTGTCTTTGGATTTTGGGGAATGAAAGAACCCTATCAAATAGTGAATCTATTTGGGAAAA GTTAGTCCATGATGCTAAGGAACGCAATTGTTTCTTTCATGCTGATGAAGACAAGGATTTGGCCAAAGCCATTTTAGAAGTCAAGAAAGAGTTTGATCAG CTTGATGATTTGATTAAAGGAGACAGTGCACTATTCAGAAGTGCTAGATGGAAGGTTCTTTTCAGTGAATACTTCAAAAAATCATTTGGCAAACTAGCAT CAGTCAGAAAGAAGACACCTGTTCTGAACCTTCTACTGAAACTTTCCAGTGGCTGGCGTCCTAAGAAAAGGAGTGTGGACTTCATTTGCGGAAGCTCTTC TCAAATCTTGAAACAGTTCAAGGTTGAAGGACTGTATGTAATCTGTTCAATTGACATAGTGAAGGAAATATGCTACACACAAGTTTTGAAGGTTTGGGAT TTATTACCATTAGAAGATATTCCTATACTGGCTAAACGTCTAGAGGGCATCTTTGAGACATATACTGATGATTTTATCAGTCATTGCAATGAAAAATGTC TAGAGGGAGATCTGGAAGTTCCAAAAACTTGGAGAACCTCTTTTGATATTCCCAGATATAAGAGTTGCAGCAACAATGAAATAAGAAGCAATTCAAATTC TGGTGGTCCTGATGGTCCCTACTATGTAGAGAACTCAAAAGTGAGTGATAGTTTGTTGCTGATGAAGTTCTACTCATTATCTTCTGGGGTCGTGAGCCAC TTGCTTTCTGACCGTGATGGAAGAGAATTGGAGCTCCCATTTGAAGTGACTGATGACGAACTCGAGATAATCATATTCCAAAGAAGTACATTTATACTAG GACGATCAGGGACTGGTAAAACGACTGTTTTGACAATGAAGCTGTTTAAGAAAGAGGAACTATATTATACGGCAACACAGGGATACTTAAATACTTCAAA GGACAGCAGCAGGAGAAACAATGTTGCTGATGACATTAAATCTGTCGGGGATGGTGTTGGAGATGCCAAAGAAACTGTCTTGCGTCAACTTTTTGTGACA GTCAGTCCAAAACTCTGTTATGCCATCAAGCATCATGTGATACAATTGAAAAGCTTTGCCTCTGGTGGAAAATACTCAGCAGAAGGGAGTTCAGTTGATA TGGAAGGTATTGATGATGCAGCACAATTCAAAGAAATTCAAAACTCTTTCTTAGATATTCCTCCAAAGTCATACCCACTTGTTATCACTTTCTTTAAATT TTTAATGATGCTTGATGGAACAGTGGGTAATTCGTACTTTGAAAGATTTTCTGACATGAGGCAGCTTTTGCATGAAAAAGTGGGGAATTCAGGATCAATC TCAGCACAAACTCTTATAAGAACGAAGGAGGTTAACTTCGAGAAGTTTTGTGCAGTTTATTGGCCACGTTTCAATGAAAAATTCAAAAAAAAGCTTGATT CATCCAGAGTATTTACTGAGATAATATCCCATATAAAAGGTGGCCTGCGAGCTGGAGAGTCTTGTGATGGCAGACTGAGCCGAGAAGATTATGTTTTTCT ATCAGAAGGTCGTATATCCACTTTAAATAGGCAGAAGAGAGATTTAATATATGATATTTTTGAAGACTATGAAAAGATGAAGGCAGAAAATGGTGACTTT GATATGGCTGATTTTGTAAATGATCTTCATCTTCGTCTTAAAACTTACAAGTATGAGGGTGATGCGATGGATTTTGTCTATATTGATGAAGTCCAAGATC TTACAATGAGGCAGATTGCTCTCTTCAAACATATCTGTAGGAATGTAGATGAGGGATTTGTTTTTTGTGGTGATACAGCGCAAACAATTGCTAGGGGGAT TGACTTTAGGTTTGAAGATATAAGATCTTTGTTCTATAAGGAGTTTGTTTTAGTATCAAGGAGTGCGGGAAATGACAGAAACGAGAAAGGTCAAATATCT AAAATATTTCATTTGAACCAGAACTTCCGTACCCATGCTGGTGTGCTCAATTTAGCTCAGAGTGTTATTGATCTTCTTTACCGTTTTTTCCCTTCATTTA TTGATGTTTTAAGCCATGAAACAAGTCTTATTTATGGGGAAGCTCCTATTTTACTTGAATCTGGAAATGATGAAAATGCAATTGTAACTATTTTCGGGAA TAGTGGGAATGTGAGAAGCAATTTTGTTGGGTTTGGAGCAGAGCAGGTGATATTGGTGCGGGATGATGCTGCTAAGAAAGAGATTGATAACTATGTTGGG AAGCATGCTCTTGTTTTGACTGTTGTAGAGTGCAAGGGCCTAGAATTTCAGGATGTCCTCTTGTACAACTTTTTTGGCTCATCACCTTTGAAAAATAAAT GGAGAGTTGTCTATGAGTTTATGAAGGAACAAGATTTACTTGATGGCAATTCCCCATCCTTTCCAAGTTTCATCCCAGCAAAACATAATGTCTTGTGCTC TGAGTTGAAGCAATTATACGTTGCTATCACTCGTACACGGCAAAGGTTGTGGATTTGTGAGAATGTGGAGGAGTTCTCCAGACCAATGTTTGACTACTGG ACGAAGAAGGGCCTTGTCCAAGTGAGGAAACTGGATGATTCGCTTGCCCAAGCAATGCAAGTTTCTAGCAGTCCAGAAGAGTGGAAGTCTCAGGGTTACA AGCTTTTACGTGAGGGTAACTATGAGATGGCAACTATGTGCTTTGAAAGAGCAGGGGATGAACATGGGGAGAAATTGTCCAAGGCTGCTGGGCATAAAGC AGCTGCTGACAGAATGCATAGTTCAAATCCTGAAATGGCTTCTGTTGCCCGTAGGCAGGCTGCAGAAATTTTTGAATCAATAGGCAAGGCTGAGTATGCT GCCGAATGCTTTTACATGTTGAAGGAGTATGATAGGGCAGGTAGGATTTACTTGCAATGTGGGGAATCTGCAATGGAAAGAGCTGGAGAATGTTTTTTTC TTGCTGGAAGTTATTGTTCTGCAGCTGAAGTATATGCAAAAGGCTGGAATTTCTCCAAGTGCTTGTCTGCATGTACCAAAGGAAAACTCTTCGACACGGG CTTGCATTATATACTGTACTGGAAACAACACGGGACTGCAGATCAAAGAAGCAGAGAAATGGATACAATTGAACAAGAGTTTCTGGAGAGCTGTGCTTGT CATTATTACGAGCTCAATGACAACAGAGCCATGATGAGATATGTTAGAGCTTTTGATTCCATGTCTTCAGCTCGTACTTTCTTGATTAATTTAGGGTGCC TTGATGAGCTTCTGTCATTGGAAGTGGAATCAGGCAACTTCCTGGAGGCGGCGGGCATTGCGAAGCTGAAAGGTGAGCTTGTCCTTGAGGCAGATCTACT GGGCAAGGGTGGACATTTTAAGGAGGCATCATTGCTTATTCTGTGGTTTGTGTTTGCAAACTCTCTCTGGTCAACTGGGAGCAAAGGCTGGCCTTTAAAG CAGTTTCTTCAGAAAGAGGAACTTTTAACAAAAGCTAAGTTACTTGCAAAGGGTGTGTCAAACCAGTTTTATGAGTTTGTTCACACAGAGGCTGAAATTT TATTGAATAGCCAGCACAACTTATTCAAGATTCATCAAAGTCTAGATTCTTCTCAGAGACATAGTAGTATCAGAGGTGAAATATTATCAGCTCGAAAGAT GCTGGACATGCATCTTCATTTAAATACCTCAAAGTATTTGTGGGAAAATGACTTAGTGTCTGATTTAGCAAGGTTGTCAGAAAGAAACTTTTTGAACAAC CAGGTCTCTGCTGAGACACTTGTTTACTTTTGGAATTTTTGGAAGGATAAGATTGTGAACATATTCAAGTTTCTTGGACGTCTTGAAATGCAAGATGTAA CTGAATATGGAGATTTTGGTGAATTCTGCTTGAATTACTTGGGCGTGAAGAGACAGTTTAATAATCTGAACGCTATCTATTTTCTGATGATCTCGGATGC TCAGTGGGTGAGGGAAATACCCAGAAAATTTATTCAAAGGAAGGGGAACTTGGTTTCTGTAGATGTTCATCAGTTTGTCACTGCTGCTCAGGGTTATTGG TGTTCGGAATTACTTTCTGTCGGCATGAATGTATTGACCAATCTTGAAGCCCTTTACAATTTATCAGTTAGGAATTCCTTGTCCCTCTTTTGCCAAAGCA GGTCTCTTACTCATATATATGAGGTGGCAAATTTTCTTTTGAATTGCCAGTTTCTAAGTATTCAACACGGTGATATCAAGGCACTGCGGAAATTCACTCG ACTGGCAACTGGATGCTTCTATGATTGCATCTATCCTAGGGACTGGAGAGAATCACTGAAAGAGAATATGATTTCGTTGAGGAGAACTGAGATTTGTAGG AATTTACTCAAGGAAGTTATCTTTGAAGATGTGAGCTCAAAGAACAATCTGTCTTATGCGCAACTTGGAAGGATCACATCGATGATTCTTGGTTCTGGTG AGATTTTATGTGAACCATATGAGAAGATGGCAGATGGTTTACAATGGAATTCTTCATGGAAGGCTTTCATTGAGGATCTCTGTAGGAATGAGAGTGAGGT GTCCTATATGCAGAAGTTGCATGAAGCTCTGGAAGATACTTATTATGCCAACTGGAGGAAAGGAGATTATATCTTGCCTGGTTGTTTCTTATACATGCTC GAACGCCAACTAATTTTGTTATCCTACTTCCAAGGCTATTGTTTTACAACAAAGTCTTCTTTTGTGGAATGGCTTATCTACCAAGAAGGCCATGGGAGTC CAGCTTTTGAAGGTTTGAGGGGACATGCACCCCAATCTACAGAAAGCATCCTGGAGTTTATTGTTGAGACTGTTCAGCGGTTTCTTGATAATGAGAAGGA AATGATGGAGTGGATAAGAGCATCGGAAAAGAACGTGAAGGTCCTGAATGACTACCATGCTGTAGTAGTGTTGAGATTGGTTGTCATAATATGTTTAATT TATGTGAACTTTGGATTGTGTAAAGGCTTGCTTTCTGACTTGCTGGGTAGGACCTATATCACCAAAAAACTGCCAGGTCAATTTTATGATGCCATCCGGA AGAGGCAGAAGCATAATTCTCTGAATGTAAATCCAACTGTGGTAGCTGAAGCATTTAGCAAGATTGGCAATCCTCTGGTAGTTGTGAGTTTTGGTAAAAA TTGCTCAAGATTTTTATGTCCAGATGCTATTTTTGTGGACATGAAGGTCAATGAAAGTAAAGACAACGTATTAAGAGTCTTGTTTGCAAAGACTGATGCT ACAGCCCAGGATCACACGGGAGCTGTTGAAGCAAACACTAGGAGCTCATTTAAAGGAATAGTGTCTCAGGGCATTGAAGATCTGGGGAAGATACCTGAGC TTCCATCTAATGTTGGAGATACGGCTAACTGGAACTCGAGTTGTGGGAAGAAGGATGAGGGTAACCCTCCATTGCGCCATGAACGGCTTTGGGAAATATT TGAAGCACTAAAATCTCCAAACCATGGAGTAGATGAAAGAAGCAATATTGCATGCGATCCAACATTTAAGGTGGATATAGACAGAATTACTTGCCTTTTA AAAGCAGCAATTGATGGAAATTTTCAGAACCCTCCCAGTGTTGATAATAAAAACCTGCTTGAGGAAGCTTCCACCATGCTTCACGAATTGGGGCAACTTA ATGCTGCATTAGAAATGAGGGAACCAGAACATGAGAGCGACATTTCTACAATTGGAGAACTTCTCGAGAAGCTGCAGTCAAGAAGGCCAAGAATGGAATT TTTCCTAAGCCAGATATTCTTGCAACACGATGAAAATCTTAAAAGAGAGATGTCAGAGAGAAACATTGCATCAGATGGCCAACGTGATGAGGAACATAGT AACAGCAAGGCTGAGGGGAGTTGCGTTTCTGCTAAAGGTGAGATAAACATTTCACGGAGTAATGTTGAAACCGAAGGTAGAAACCCTGATACGGAGAACA AGGGGAAGGGAAACAGCAAGTCCAAGAAAAACAAGAAGGGAAAAGGAGGGCGGAAACGCAAGTAG
AA sequence Show only first row Show all	>Potri.008G143450.1 pacid=42806876 polypeptide=Potri.008G143450.1.p locus=Potri.008G143450 ID=Potri.008G143450.1.v4.1 annot-version=v4.1 MDNACLFLSASVLHCIVKINEKLMMERSESSSKMMKKKEITNDHTFVDTIFSWSLEDIFNENLFKVENIPESYYSVEHYLGSYVIPLLEETRAQLSSSMD IISRAPFAEMVAFFEAKPHGTLLYDVNIDYWRNRSRGSGKEHYKTLPGDIVILTSAKPENVSDLQRVGWTWTFAVVTRITGDETEDAATYTSFTVKAQKD IEISDGLQKSLTVISLTNITTSKRIWNALHMFGNLNIIKEILCTDSVVEENCNQYSMRERAIYDENVVNLSSKLNESQSKAVLACLLKKQSNHKSAVELI WGPPGTGKTKTVSMLLFSLLKMKCRTLTCGPTNVSITEVASRVFKLVTESHEADSGTDSLFHSVGDILLFGNKDRLKVDSETQEVYLDYRVKRLIECFAP LTGWRNCFNSTIDFFEDCVSQYAIFVENELIKMQEHDDENEEKRESCSYQAVALKGEPKTFLEFMRDRFRSTALPLKRCLTLLCTHIPETCILKHNIQNI VSLFGLLNSFESWLFHAAVISDEMHEVFSHPELDEDSFQGFNDILLRLRLKRSECLTMLKRVRDSLRHLDLPSAMNKRSIEEFCFQKATLFLCTASSSYK LHLLPIEPLDFLVVDEAAQLKECESTIPLQLPGIRHAILIGDECQLPAMVKSNVCDKAGFGRSLFERLSSLGHSKHLLDMQYRMHPSISCFPNSKFYFNQ ILDAPNVKARSYEKHYLPGPMFGPYTFINVFGGREELDDVGHSRKNMVEVALVLKLLRSLCKAWSGQKVRVGVISPYTAQVGAIQEKLGKKYENIDGFSV KVSSIDGFQGGEEDIVIISTVRSNTGGAIGFMSDPRRINVALTRARHCLWILGNERTLSNSESIWEKLVHDAKERNCFFHADEDKDLAKAILEVKKEFDQ LDDLIKGDSALFRSARWKVLFSEYFKKSFGKLASVRKKTPVLNLLLKLSSGWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDIVKEICYTQVLKVWD LLPLEDIPILAKRLEGIFETYTDDFISHCNEKCLEGDLEVPKTWRTSFDIPRYKSCSNNEIRSNSNSGGPDGPYYVENSKVSDSLLLMKFYSLSSGVVSH LLSDRDGRELELPFEVTDDELEIIIFQRSTFILGRSGTGKTTVLTMKLFKKEELYYTATQGYLNTSKDSSRRNNVADDIKSVGDGVGDAKETVLRQLFVT VSPKLCYAIKHHVIQLKSFASGGKYSAEGSSVDMEGIDDAAQFKEIQNSFLDIPPKSYPLVITFFKFLMMLDGTVGNSYFERFSDMRQLLHEKVGNSGSI SAQTLIRTKEVNFEKFCAVYWPRFNEKFKKKLDSSRVFTEIISHIKGGLRAGESCDGRLSREDYVFLSEGRISTLNRQKRDLIYDIFEDYEKMKAENGDF DMADFVNDLHLRLKTYKYEGDAMDFVYIDEVQDLTMRQIALFKHICRNVDEGFVFCGDTAQTIARGIDFRFEDIRSLFYKEFVLVSRSAGNDRNEKGQIS KIFHLNQNFRTHAGVLNLAQSVIDLLYRFFPSFIDVLSHETSLIYGEAPILLESGNDENAIVTIFGNSGNVRSNFVGFGAEQVILVRDDAAKKEIDNYVG KHALVLTVVECKGLEFQDVLLYNFFGSSPLKNKWRVVYEFMKEQDLLDGNSPSFPSFIPAKHNVLCSELKQLYVAITRTRQRLWICENVEEFSRPMFDYW TKKGLVQVRKLDDSLAQAMQVSSSPEEWKSQGYKLLREGNYEMATMCFERAGDEHGEKLSKAAGHKAAADRMHSSNPEMASVARRQAAEIFESIGKAEYA AECFYMLKEYDRAGRIYLQCGESAMERAGECFFLAGSYCSAAEVYAKGWNFSKCLSACTKGKLFDTGLHYILYWKQHGTADQRSREMDTIEQEFLESCAC HYYELNDNRAMMRYVRAFDSMSSARTFLINLGCLDELLSLEVESGNFLEAAGIAKLKGELVLEADLLGKGGHFKEASLLILWFVFANSLWSTGSKGWPLK QFLQKEELLTKAKLLAKGVSNQFYEFVHTEAEILLNSQHNLFKIHQSLDSSQRHSSIRGEILSARKMLDMHLHLNTSKYLWENDLVSDLARLSERNFLNN QVSAETLVYFWNFWKDKIVNIFKFLGRLEMQDVTEYGDFGEFCLNYLGVKRQFNNLNAIYFLMISDAQWVREIPRKFIQRKGNLVSVDVHQFVTAAQGYW CSELLSVGMNVLTNLEALYNLSVRNSLSLFCQSRSLTHIYEVANFLLNCQFLSIQHGDIKALRKFTRLATGCFYDCIYPRDWRESLKENMISLRRTEICR NLLKEVIFEDVSSKNNLSYAQLGRITSMILGSGEILCEPYEKMADGLQWNSSWKAFIEDLCRNESEVSYMQKLHEALEDTYYANWRKGDYILPGCFLYML ERQLILLSYFQGYCFTTKSSFVEWLIYQEGHGSPAFEGLRGHAPQSTESILEFIVETVQRFLDNEKEMMEWIRASEKNVKVLNDYHAVVVLRLVVIICLI YVNFGLCKGLLSDLLGRTYITKKLPGQFYDAIRKRQKHNSLNVNPTVVAEAFSKIGNPLVVVSFGKNCSRFLCPDAIFVDMKVNESKDNVLRVLFAKTDA TAQDHTGAVEANTRSSFKGIVSQGIEDLGKIPELPSNVGDTANWNSSCGKKDEGNPPLRHERLWEIFEALKSPNHGVDERSNIACDPTFKVDIDRITCLL KAAIDGNFQNPPSVDNKNLLEEASTMLHELGQLNAALEMREPEHESDISTIGELLEKLQSRRPRMEFFLSQIFLQHDENLKREMSERNIASDGQRDEEHS NSKAEGSCVSAKGEINISRSNVETEGRNPDTENKGKGNSKSKKNKKGKGGRKRK

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G65810			P-loop containing nucleoside t...		Potri.008G143450 [exp]	0	1
AT1G65810			P-loop containing nucleoside t...		Potri.008G143000 [exp]	1.41	0.8781
AT3G61220		SDR1	short-chain dehydrogenase/redu...		Potri.002G156300 [exp]	1.73	0.8883
AT2G13650		GONST1	golgi nucleotide sugar transpo...		Potri.007G106400 [exp]	6.16	0.8378
AT3G52490			Double Clp-N motif-containing ...		Potri.016G071800 [exp]	6.48	0.8685
AT5G17980			C2 calcium/lipid-binding plant...		Potri.013G055500 [exp]	7.21	0.8704
AT5G66440			unknown protein		Potri.005G120300 [exp]	7.48	0.8517
AT4G00900		ATECA2, ECA2	ER-type Ca2+-ATPase 2, ARABIDO...		Potri.014G101900 [exp]	7.48	0.8636	Pt-ECA2.1
AT3G60730			Plant invertase/pectin methyle...		Potri.002G145700 [exp]	8.12	0.8327
AT5G06850			C2 calcium/lipid-binding plant...		Potri.016G049300 [exp]	9.00	0.8728
AT5G63930			Leucine-rich repeat protein ki...		Potri.013G051300 [exp]	11.31	0.8043

Compare expression of checked genes

Potri.008G143450 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.