Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP86.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24540 682 / 0 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) AT1G13140 654 / 0 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT3G26125 634 / 0 CYP86C2 "cytochrome P450, family 86, subfamily C, polypeptide 2", cytochrome P450, family 86, subfamily C, polypeptide 2 (.1) AT1G13150 625 / 0 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1) AT5G23190 523 / 0 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 501 / 2e-174 Cytochrome P450 superfamily protein (.1) AT4G00360 416 / 5e-140 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G01600 412 / 2e-138 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT1G63710 408 / 1e-137 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT2G45970 403 / 3e-135 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G050100 [exp] 1011 / 0 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.007G072100 [exp] 515 / 6e-179 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 514 / 3e-178 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.003G129100 [exp] 402 / 9e-135 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.009G043700 [exp] 399 / 5e-134 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.014G085800 [exp] 397 / 1e-132 AT2G45970 866 / 0.0 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Potri.001G249700 [exp] 393 / 1e-131 AT5G58860 790 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.015G132800 [exp] 392 / 1e-131 AT4G39490 589 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.007G080300 [exp] 385 / 2e-128 AT4G39490 574 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006232 [exp] 597 / 0 AT1G24540 524 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Lus10017394 [exp] 498 / 5e-172 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 493 / 4e-170 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10010193 [exp] 492 / 6e-170 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10018217 [exp] 395 / 2e-132 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10040687 [exp] 391 / 5e-131 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 386 / 4e-128 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10002527 [exp] 382 / 2e-127 AT2G23180 454 / 7e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10003669 [exp] 382 / 3e-127 AT2G23180 440 / 4e-150 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10022279 [exp] 365 / 1e-120 AT2G23180 449 / 4e-154 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.008G183300.1 pacid=42808795 polypeptide=Potri.008G183300.1.p locus=Potri.008G183300 ID=Potri.008G183300.1.v4.1 annot-version=v4.1 ATGAGAAGAGAGCCTACTATGGCAGAAAATATATTGTCCTCTGCAACGCAATGGATTTACACTCACTCATCATTTTGGGATGTATCTATGGCGTTGTTGG GACTCTTCGTTTTCCAATGCATAAACGATAGGCTCACTAACAAAGGCCCTATGCTATGGCCTGTATTGGGGATCATACCGACCATGTTCCTTCACGTCAA CGACATGAACAATTTCGTCACGAGAGCTTTAAGCAAAGCAGGGGGGACCTTCCACCATAAAGGAATGTGGATGGGAGGCGCATATGGAATCGTGACCGCC GATCCTTCCAGTATTGAGTATATGCTTAAAACGAACTTCAAGAACTTCCCAAAAGGGAAATACTTCAGAGAGAGGTTTCAGGATTTGCTAGGGGATGGTA TTTTCAATGCTGACGATGAATTATGGAGGGAACAAAGGCAAGCAGTGAGAGCAGAGATGCATTCAAGCCGGTTCATTGAGCACTCGCTCCGAACCATGAA AGATCTGGTGCACCAGAAGCTGTTGAAGCTGACAGATAATCTGGTAAGGTCAGGAGATAGTTTTGATCTCCAAGAAGTGCTTCTCCGGTTTACATTTGAT AACATTTGTAGTGCAGCTTTTGGGGTTGATCCTGGGTGCTTAGCCCTAGATATCCCTGACGTTCCCTTCGCAAAAGCTTTTGAAAAAGCAACAGAATTGA TTTTGTTCAGATTCCTGATTCCGCCTTTCATTTGGAAGACCATGAAGTTCTTTGGAATAGGATACGAGAAGACGCTGAAGGAGGCAGTTGGAATTGTGCA TGAATTTGCTGAGAAGACAGTAAAGGGTAGAAGAGATGAGATCAGGAAGCATGGTAGCTTATGCCATCAATCTGATCTCTTGTCCAGGCTTATTGAGATT GAATATACTGGACGAGGCAAGGAGATGCAATTCCCAGATAAGTATTTCAGAGATTTGTGTGTAAATTTTATCCTAGCAGGGCGAGACACCACATCAGTGG CATTGGCATGGTTTTTCTGGTTAGTACACAGCAATCCACAAGTAGAAAACAGAATACTACGCGAGATCAATGACATTTTGTCCCTTCGTGAGACACAGAC AAAAAACGAGGTCATTTTCACAATGGAAGAATTGAACAAGATGGTGTATCTTCAAGCAGCATTATCCGAATCCCTGAGGCTGTATCCATCTGTGCCTATT GAAGTGAAAGAAGTTGTACAAGATGATGTTCTCCCTGATGGTTCCATAGTGAAGAAGGGCGCCCGAGTTTTCTACTGCATATTCGCAATGGGCAGGATGG ATTCTATATGGGGAGAGAACTGCTTGGAGTTTAAGCCAGAGAGGTGGATTAAGGATGGAAAGTTTGTTAGTGAGAACCAGTTCAAATATGCAGTGTTCAA CGCCGGTCCAAGGCTGTGCCTGGGGAAGAAGTTTGCATACTTGCAGATGAAAATGGTGGCAGCTTCAATCCTGTTGAGATATTCAGTTAAGGTAGTTGAA GGCCATGATGCTATTCCAAAAATGACCACCACTCTCTACATGAAGAATGGACTGTTGGTGACTCTGATGCCTAGATCGGTGAACACTACTGCATCATAA
AA sequence Show only first row Show all	>Potri.008G183300.1 pacid=42808795 polypeptide=Potri.008G183300.1.p locus=Potri.008G183300 ID=Potri.008G183300.1.v4.1 annot-version=v4.1 MRREPTMAENILSSATQWIYTHSSFWDVSMALLGLFVFQCINDRLTNKGPMLWPVLGIIPTMFLHVNDMNNFVTRALSKAGGTFHHKGMWMGGAYGIVTA DPSSIEYMLKTNFKNFPKGKYFRERFQDLLGDGIFNADDELWREQRQAVRAEMHSSRFIEHSLRTMKDLVHQKLLKLTDNLVRSGDSFDLQEVLLRFTFD NICSAAFGVDPGCLALDIPDVPFAKAFEKATELILFRFLIPPFIWKTMKFFGIGYEKTLKEAVGIVHEFAEKTVKGRRDEIRKHGSLCHQSDLLSRLIEI EYTGRGKEMQFPDKYFRDLCVNFILAGRDTTSVALAWFFWLVHSNPQVENRILREINDILSLRETQTKNEVIFTMEELNKMVYLQAALSESLRLYPSVPI EVKEVVQDDVLPDGSIVKKGARVFYCIFAMGRMDSIWGENCLEFKPERWIKDGKFVSENQFKYAVFNAGPRLCLGKKFAYLQMKMVAASILLRYSVKVVE GHDAIPKMTTTLYMKNGLLVTLMPRSVNTTAS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G24540		CYP86C1	"cytochrome P450, family 86, s...		Potri.008G183300 [exp]	0	1	Pt-CYP86.2
AT5G54630	C2H2ZnF		zinc finger protein-related (....		Potri.004G030800 [exp]	2.00	0.9909
AT2G23180		CYP96A1	"cytochrome P450, family 96, s...		Potri.015G086900 [exp]	4.89	0.9890
AT3G06120	bHLH	MUTE, bHLH045	MUTE, basic helix-loop-helix (...		Potri.008G202900 [exp]	5.74	0.9834
AT5G53390			O-acyltransferase (WSD1-like) ...		Potri.019G070900 [exp]	7.54	0.9891
AT4G15630			Uncharacterised protein family...		Potri.008G205100 [exp]	8.00	0.9908
AT2G46810	bHLH	bHLH070	basic helix-loop-helix (bHLH) ...		Potri.002G180300 [exp]	8.66	0.9818
AT3G01680		SEOR1, SEOb	Sieve-Element-Occlusion-Relate...		Potri.008G183200 [exp]	10.90	0.9634
AT4G13840			HXXXD-type acyl-transferase fa...		Potri.001G319200 [exp]	10.95	0.9804
					Potri.002G252200 [exp]	17.17	0.9880
AT1G75800			Pathogenesis-related thaumatin...		Potri.001G221200 [exp]	17.40	0.9678

Compare expression of checked genes

Potri.008G183300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.