Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ALA3.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G59820 1950 / 0 ALA3 aminophospholipid ATPase 3 (.1) AT3G25610 967 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT1G68710 964 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT1G17500 964 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT1G13210 947 / 0 ACA.L autoinhibited Ca2+/ATPase II, autoinhibited Ca2+/ATPase II (.1) AT3G27870 944 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT1G26130 940 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1.2) AT1G72700 938 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT3G13900 934 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT1G54280 919 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G039900 [exp] 2257 / 0 AT1G59820 1964 / 0.0 aminophospholipid ATPase 3 (.1) Potri.010G132700 [exp] 974 / 0 AT1G68710 1753 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.008G111200 [exp] 967 / 0 AT1G68710 1767 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.012G058000 [exp] 957 / 0 AT1G68710 1764 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.001G349100 [exp] 918 / 0 AT3G27870 1687 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.003G043300 [exp] 910 / 0 AT1G17500 1891 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.001G197500 [exp] 902 / 0 AT1G17500 1902 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.001G081200 [exp] 867 / 0 AT1G17500 1461 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.006G109200 [exp] 686 / 0 AT5G04930 1321 / 0.0 aminophospholipid ATPase 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013286 [exp] 2066 / 0 AT1G59820 2015 / 0.0 aminophospholipid ATPase 3 (.1) Lus10030809 [exp] 2045 / 0 AT1G59820 2006 / 0.0 aminophospholipid ATPase 3 (.1) Lus10036682 [exp] 2007 / 0 AT1G59820 1990 / 0.0 aminophospholipid ATPase 3 (.1) Lus10019152 [exp] 1006 / 0 AT3G25610 1871 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10035069 [exp] 952 / 0 AT3G25610 1783 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10022238 [exp] 945 / 0 AT3G27870 1837 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10035068 [exp] 936 / 0 AT1G68710 1677 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10006881 [exp] 928 / 0 AT1G17500 1907 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10008473 [exp] 920 / 0 AT1G17500 1914 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Lus10037622 [exp] 917 / 0 AT1G17500 1895 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00122 [poplar] [flax] E1-E2_ATPase E1-E2 ATPase CL0137 [poplar] [flax] HAD PF12710 [poplar] [flax] HAD haloacid dehalogenase-like hydrolase CL0137 [poplar] [flax] PF16209 [poplar] [flax] PhoLip_ATPase_N Phospholipid-translocating ATPase N-terminal CL0137 [poplar] [flax] PF16212 [poplar] [flax] PhoLip_ATPase_C Phospholipid-translocating P-type ATPase C-terminal
Representative CDS sequence Show only first row Show all	>Potri.008G191400.1 pacid=42808157 polypeptide=Potri.008G191400.1.p locus=Potri.008G191400 ID=Potri.008G191400.1.v4.1 annot-version=v4.1 ATGAGCGGTGGATGGGAAAGGGTTAGGGGTTCCAGATCGAGACCGACTCGCGATTCCAGCTCTGGTCTAAGGATGCCTTCTCGGAATGTAACACTCGGCC GAGTCCAGCCTCAAGCCCCTGGTCACCGCACTATTTACTGCAATGATCGCGACGCCAATCTCCCTGTCAGATTCAAGGGAAATTCAATATCAACCACCAA GTACAACTTCTTTACTTTTTTCCCCAAAGGATTGTTTGAACAGTTCAGGCGGGTGGCGAATTGTTATTTTCTCATGATCTCGATCTTATCAACGACACCA ATCAGTCCTGTTAATCCAGTGACAAATGTTGTCCCTCTGACCCTGGTGCTGCTTGTCTCCCTCATTAAGGAGGCATTTGAGGACTGGAAGCGTTTTCAGA ATGATATGGTAATTAACAATACCCTTATAGACGTGTTGCAAGATGAGAAGTGGGTGGCTGTTCCCTGGAAGAAGTTGCAGGTTGGAGACATTATCCGGGT TAAGCAGGATGGATTCTTTCCTGCGGATCTGCTTTTCCTAGCAAGTACAAATGCAGACGGTGTCTGCTACGTTGAGACTGCAAATTTGGACGGGGAAACA AATTTGAAGATCAGAAAGGCACTAGAAAGGACATGGGATTACTTGACTCCTGAGAAAGCTGCTGAATTTAAAGGTGAGGTGCAGTGTGAGCAACCAAACA ACTCACTATACACTTTCACGGGAAATCTCATGTTCCAAAAGCAAACATTGCCTCTCTCACCAAACCAAATTCTTTTAAGAGGATGTAGTCTTAGGAACAC AGAGTACATTGTTGGTGCTGTTGTTTTTACAGGTCATGAAACAAAGGTCATGATGAATTCCATGAATGTTCCTTCCAAGAGGAGTACATTGGAGAGGAAA CTTGATAAACTTATACTCGCTCTTTTTGGTACTCTGTTCATGATGTGCCTCATCGGAGCCATTGGGAGTGGCATTTTCATAAACCGGAAGTATTACTATC TAGGTCTTGATAAAGGCGTGGCTGCAGAGTTTAACCCTAGCAACCGATTTGTGGTTGCAGCTCTAACTTTCTTTACCCTAATCACTCTATACTCGACAAT AATTCCCATATCTTTATATGTTTCTATTGAGATGATTAAATTTATTCAGTCCACTCAATTTATCAATAAGGACCTACATATGTACCATGCTGAAACTAAC ACCCCTGCATTGGCCAGGACTTCCAATTTAAATGAGGAACTTGGACAGGTTGAATATATCTTTTCTGATAAAACCGGCACTTTAACAAGAAATTTGATGG AGTTCTTTAAGTGTTCAATTGGAGGAGAGGTTTATGGATCTGGTGTCACTGAAATAGAGCAGGGAGGAGCTCAGCGGAATGGCATAAAAGTTCAAGAACT GCGGAAATCTACCCCTGCAATTCAGGAGAAGGGGTTTAATTTTGACGATCACAGGCTTATGCGAGGAGCTTGGAGGAATGAACCCAACTCTGATTCATGC AAGGAATTTTTCAGATGTCTTGCTATTTGTCACACTGTGCTTCCTGAAGGAGATGAGTCCCCAGAGAAAATTACATATCAGGCTGCATCTCCTGATGAGG CTGCTTTAGTTACTGCTGCAAAGAACTTTGGTTTTTTCTTCTACAGGCGCACACCTACTATGATATACGTTCGCGAATCTCATGTGGAGAAGATGGGTAA AATTCAAGATGTGGCTTATGAAATTCTGAATGTTCTTGAGTTCAACAGCACAAGAAAGCGCCAGTCCGTTGTTTGTCGATATCCGAATGGTAGACTTGTA TTATATTGCAAGGGTGCTGATACTGTAATTTATGAAAGATTGGCTGGTGGAAATGATGATCTAAAGAAAGTAACCAGGGCTCATTTGGAACAGTTTGGGT CTGCTGGGTTGCGTACCCTTTGCCTTGCCTATAGAGACTTGAGTCCTGAAACATATGAAAGCTGGAATGAGAAGTTTATACAAGCTAAATCTTCTCTCAG AGATCGTGAGACGAAGTTAGATGAGGTTGCAGAACTTATAGAAAAGGATCTTATTTTGATTGGAAGCACAGCTATAGAAGACAAGCTTCAAGAAGGAGTA CCAGCTTGTATTGAGACTCTTTCTAGAGCTGGGATTAAGGTTTGGATGCTGACTGGGGACAAGATGGAAACAGCAATAAATATAGCTTATGCGTGCAACT TGATTAACAATGAGATGAAACAGTTCATCATCAGTTCAGAAACTGATGCGATTAGAGAAGTTGAAAACAGGGGTGACCAAGTGGAAAGTGCACGTTTTAT CAAGGAAGAAGTGAAAAAAGAACTGAAGAAGTACCTTGAGGAAGCACAGCACTATTTACACTCTGCACCTGGACCAAAACTAACACTTGTTATAGATGGG AAGTGTTTGATGTATGCATTGGACCCAACTTTACGAGTAATGTTACTGAATTTGAGCTTGAATTGTACTTCAGTTGTTTGCTGTCGGGTTTCTCCTTTAC AGAAAGCACAGGTAACTAGTTTGGTAAAGAAAGGTGCTCGGAAAATAACGCTCAGTATAGGGGATGGAGCCAATGATGTAAGCATGATTCAAGCTGCGCA TATTGGTATTGGAATAAGTGGGATGGAAGGGATGCAAGCAGTGATGGCCAGTGATTTTGCAATTGCTCAGTTTCGCTTTCTTACAGATTTACTTCTTGTG CATGGACGATGGTCTTATCTTAGAATATGCAAGGTCATCACATACTTTTTTTACAAGAACCTTACATTCACTCTGACTCAATTTTGGTTCACCTTTCAAA CTGGTTTTTCTGGTCAAAGATTCTACGATGATTGGTTCCAGTCATTATATAATGTCATATTCACAGCCCTGCCGGTGATCATTGTTGGGCTTTTTGATAA GGATGTCAGTGCATCCCTTTCGAAGAAGTACCCTGAACTGTACAGGGAGGGAATAAGAAATGTCTTTTTCAAGTGGAGAGTTGTGGTCACATGGGCTTGC TTTTCTGTGTATCAGTCGCTTGTCTTTTATCACTTTGTGATCGCCTCCAGTGCCAGTGGTAAAAATTCATCAGGCAGGATGTTGGGACAATGGGATATCA GCACGATGGCCTTCACTTGTGTTGTAATCACTGTCAACCTGCGTATCCTTATGATATGTAATTCAATTACAAGGTGGCATTATATTAGTGTTGGAGGGAG CATTTTGGCATGGTTCATGTTCATTTTTGTATATTCTGTTTTACGGGAGAATGTTTTTTTCGTCATATACGTGTTGATGAGTACATTCTATTTCTACCTC ACGGTTTTTCTTGTTCCTATTGTTGCACTCTTTGGCGACTTCATTTATCAAGGGATTCAAAGATGGTTCTTCCCCTACGATTATCAGATTGTTCAGGAAA TTCACAGGCACGAGCTTGAAGACAACACCAGTGCAGGATTACTGGATGTTGGGAGCCAGCTTACACCACAGGAAGAAATGAGCTATGCCATAGCTCAATT ACCACGAGAGATATCAAGACACACTGGCTTTGCTTTTGAATCACCTGGGTATGAGTCATTTTTCGCGGCGCAGCAAGGTATACAGGCCCCGCAAAAGCCA TGGGATGTTGCTCGGAGAGCCAGCATGAAGTCGAAACGAAAGATGCCCAAAAGGAACTAA
AA sequence Show only first row Show all	>Potri.008G191400.1 pacid=42808157 polypeptide=Potri.008G191400.1.p locus=Potri.008G191400 ID=Potri.008G191400.1.v4.1 annot-version=v4.1 MSGGWERVRGSRSRPTRDSSSGLRMPSRNVTLGRVQPQAPGHRTIYCNDRDANLPVRFKGNSISTTKYNFFTFFPKGLFEQFRRVANCYFLMISILSTTP ISPVNPVTNVVPLTLVLLVSLIKEAFEDWKRFQNDMVINNTLIDVLQDEKWVAVPWKKLQVGDIIRVKQDGFFPADLLFLASTNADGVCYVETANLDGET NLKIRKALERTWDYLTPEKAAEFKGEVQCEQPNNSLYTFTGNLMFQKQTLPLSPNQILLRGCSLRNTEYIVGAVVFTGHETKVMMNSMNVPSKRSTLERK LDKLILALFGTLFMMCLIGAIGSGIFINRKYYYLGLDKGVAAEFNPSNRFVVAALTFFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHAETN TPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGSGVTEIEQGGAQRNGIKVQELRKSTPAIQEKGFNFDDHRLMRGAWRNEPNSDSC KEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRYPNGRLV LYCKGADTVIYERLAGGNDDLKKVTRAHLEQFGSAGLRTLCLAYRDLSPETYESWNEKFIQAKSSLRDRETKLDEVAELIEKDLILIGSTAIEDKLQEGV PACIETLSRAGIKVWMLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVESARFIKEEVKKELKKYLEEAQHYLHSAPGPKLTLVIDG KCLMYALDPTLRVMLLNLSLNCTSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGIGISGMEGMQAVMASDFAIAQFRFLTDLLLV HGRWSYLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNVFFKWRVVVTWAC FSVYQSLVFYHFVIASSASGKNSSGRMLGQWDISTMAFTCVVITVNLRILMICNSITRWHYISVGGSILAWFMFIFVYSVLRENVFFVIYVLMSTFYFYL TVFLVPIVALFGDFIYQGIQRWFFPYDYQIVQEIHRHELEDNTSAGLLDVGSQLTPQEEMSYAIAQLPREISRHTGFAFESPGYESFFAAQQGIQAPQKP WDVARRASMKSKRKMPKRN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G59820		ALA3	aminophospholipid ATPase 3 (.1...		Potri.008G191400 [exp]	0	1	ALA3.2
AT1G76680		OPR1, ATOPR1	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Potri.003G004600 [exp]	5.29	0.8258
AT3G62240	C2H2ZnF		RING/U-box superfamily protein...		Potri.005G004600 [exp]	9.64	0.8187
AT2G26060		EMB1345	embryo defective 1345, Transdu...		Potri.014G136700 [exp]	12.96	0.8091
AT3G06810		IBR3	IBA-RESPONSE 3, acyl-CoA dehyd...		Potri.010G010448 [exp]	13.26	0.7845
AT3G07040		RPS3, RPM1	RESISTANCE TO PSEUDOMONAS SYRI...		Potri.008G187700 [exp]	20.78	0.7934
AT2G35790			unknown protein		Potri.008G042800 [exp]	28.74	0.7847
AT1G78060			Glycosyl hydrolase family prot...		Potri.005G168400 [exp]	29.84	0.7823
AT3G52850		VSR1;1, GFS1, B...	VACUOLAR SORTING RECEPTOR 1;1,...		Potri.016G137350 [exp]	32.86	0.7673
					Potri.006G219750 [exp]	35.24	0.7628
AT1G29350			Kinase-related protein of unkn...		Potri.001G353100 [exp]	38.47	0.7763

Compare expression of checked genes

Potri.008G191400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.