Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G61560 603 / 0 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G39200 576 / 0 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 566 / 0 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G33670 429 / 4e-145 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT5G65970 421 / 7e-141 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT1G42560 416 / 1e-140 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G17480 410 / 3e-136 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G17430 408 / 3e-136 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT3G45290 370 / 5e-122 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G44110 338 / 1e-109 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G220500 [exp] 606 / 0 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 600 / 0 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 593 / 0 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 469 / 6e-160 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 454 / 7e-154 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.002G007000 [exp] 445 / 3e-150 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.005G254300 [exp] 442 / 1e-149 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.007G064300 [exp] 432 / 3e-145 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.006G129700 [exp] 429 / 8e-145 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036519 [exp] 616 / 0 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036120 [exp] 608 / 0 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 605 / 0 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10040388 [exp] 586 / 0 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 578 / 0 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 439 / 2e-147 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 419 / 6e-141 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 414 / 2e-137 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10036121 [exp] 411 / 2e-137 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 409 / 1e-136 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [poplar] [flax] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Potri.009G011900.1 pacid=42770763 polypeptide=Potri.009G011901.1.p locus=Potri.009G011900 ID=Potri.009G011900.1.v4.1 annot-version=v4.1 ATGGCAGGAGGCAGCGCCGGGAGATCTTTGGAACAAACACCAACATGGGCTGTTGCCGTAGTTTGCTTTGTTCTGGTTTCCGTTTCAATAATCATTGAGT TCATCATTCATCTTATTGCAAAGTGGTTAACGAAGAAACGCAAGAAAGCACTTTATGAAGCACTCGAAAAGATAAAATCAGAACTTATGCTACTAGGATT TATATCATTGCTGCTAACAGTAGGACAGAGTCCAATATCAAATATATGTATATCTAAGAAAGCTGGGGCTACTTGGCATCCATGCAATAAGAAGGAAGAG GCAAAACTCAACGGTACTGAAAACATAAAAGAAACAGATTATGAAAACCGCAGGAAACTTCTTTCCATATCGGATTCTGCCGGTGAAAGTCTCCGGCGTG TCTTGGCAGCTGGCGAATCAACTGACAAATGCGCTGCCAAGGGTAAAGTTCCATTTGTGTCTTCAGATGGGATTCATCAACTCCATATTTTCATCTTCGT TTTAGCAATCTTTCACATCCTCTACTGTATTCTGACCATGGCTTTGGGCAGAGCCAAGATGAAAAGTTGGAAACGATGGGAAAAGGAAACAAGAACAGCT GAATACCAGTTCTCACACGATCCAGAAAGGTTCAGGTTTGCAAGAGAAACATCATTTGGAAGAAGGCACTTGAGCTTCTGGACCAAGACACCCGTCCTAA TTTGGATAGTCTGTTTCTTTAGGCAATTTGTGAGGTCGGTTCCTAAAGTTGATTACTTGACTCTGAGACATGGCTTTATCATGGCACATTTGGCTCCCCA AAGCCATACGAAATTCGATTTCCAAAAGTACATTAATAGATCACTGGAAGAGGATTTCAAGGTTGTTGTGGGCATAAGTCCACCAATATGGTTCTTCGCC GTGATTTTCCTGCTCTTCAACACTCATGGCTGGTATTCTTATCTATGGCTTCCATTTATCCCATTGATTATCATAGTGCTGGTGGGGACTAAGCTACAGG TGATCATAACCAAAATGGGGCTTAGAATACAAGAGAGGGGAGAGGTTGTGAAAGGAGTGCCGGTGGTCCAGCCAGGCGACGACCTCTTCTGGTTCAACCG CCCACGCCTCATTCTCTATCTCATCAACTTTGTTCTCTTTCAGAATGCCTTCCAGCTCGCGTTCTTTGCGTGGTCTTGGTATGAATTTGGTATAAAATCT TGTTTCCATGAGCACGTGGAGGACATAGTCATTAGAGTTTCAATGGGGGTCCTCATAGAAATACTATGCAGCTATGTCACTCTCCCTCTCTACGCCCTTG TAACACAGATGGGCTCGTCGATGAAACCAACCATATTCAATGAAAGAGTAGCAACAGCACTGCGGAATTGGCACCACACAGCTAAGAAGCAAATCAAGCG AAACAAGGGGTCTGTGAGTGTGACTCCTATGTCTAGCAGACCAACCACCCCTTCTCGCCATACGTCTCCCATTCACCTCTTGCGCCACTATCGCGGTGAA ATAGACAGTCTCCATACTTCTCCAGGAAGATCCAACTTTGATGTTGAGCATTGGGAGACAGAGTCTCCCTCGCCCTCTCACCACCCCAATTACGCCGGCG AGGGCTCATCGTCACACCGCCACCAGCAACAACTTGAATTAGCTTCAGTAGCTGGTTACGTAGAAGATGACAAGGATATTCATGACATGGAAACAGGTTT GAATCGCGATCAAGTGGCCGCAACAGAACTTCCACAACCACCTACAACCCACCACGAGATTGATATTGTGAAAAAGGAATTTTCATTTGATAGAAGAACA AGTAAATAG
AA sequence Show only first row Show all	>Potri.009G011900.1 pacid=42770763 polypeptide=Potri.009G011901.1.p locus=Potri.009G011900 ID=Potri.009G011900.1.v4.1 annot-version=v4.1 MAGGSAGRSLEQTPTWAVAVVCFVLVSVSIIIEFIIHLIAKWLTKKRKKALYEALEKIKSELMLLGFISLLLTVGQSPISNICISKKAGATWHPCNKKEE AKLNGTENIKETDYENRRKLLSISDSAGESLRRVLAAGESTDKCAAKGKVPFVSSDGIHQLHIFIFVLAIFHILYCILTMALGRAKMKSWKRWEKETRTA EYQFSHDPERFRFARETSFGRRHLSFWTKTPVLIWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTKFDFQKYINRSLEEDFKVVVGISPPIWFFA VIFLLFNTHGWYSYLWLPFIPLIIIVLVGTKLQVIITKMGLRIQERGEVVKGVPVVQPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWSWYEFGIKS CFHEHVEDIVIRVSMGVLIEILCSYVTLPLYALVTQMGSSMKPTIFNERVATALRNWHHTAKKQIKRNKGSVSVTPMSSRPTTPSRHTSPIHLLRHYRGE IDSLHTSPGRSNFDVEHWETESPSPSHHPNYAGEGSSSHRHQQQLELASVAGYVEDDKDIHDMETGLNRDQVAATELPQPPTTHHEIDIVKKEFSFDRRT SK

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G61560		ATMLO6, MLO6	MILDEW RESISTANCE LOCUS O 6, S...		Potri.009G011900 [exp]	0	1
AT1G25520			Uncharacterized protein family...		Potri.008G117900 [exp]	2.44	0.9312
AT2G03530		ATUPS2, UPS2	ARABIDOPSIS THALIANA UREIDE PE...		Potri.008G095600 [exp]	3.00	0.9588
AT5G61820			unknown protein		Potri.015G108500 [exp]	4.00	0.9358
AT3G54140		ATPTR1	ARABIDOPSIS THALIANA PEPTIDE T...		Potri.009G042400 [exp]	4.47	0.9243
AT5G47860			Protein of unknown function (D...		Potri.003G158400 [exp]	4.47	0.9331
AT5G41610		ATCHX18	cation/H+ exchanger 18, ARABID...		Potri.003G134900 [exp]	5.09	0.9199
AT1G28380		NSL1	necrotic spotted lesions 1, MA...		Potri.004G047700 [exp]	8.94	0.9182
AT1G80300		ATNTT1	nucleotide transporter 1 (.1)		Potri.003G058900 [exp]	9.89	0.9186	AATP1.2
AT3G54300		ATVAMP727	vesicle-associated membrane pr...		Potri.010G239900 [exp]	10.58	0.9283	Pt-VAMP727.2
AT5G45130		ATRAB-F2A, RHA1...	ARABIDOPSIS RAB HOMOLOG F2A, R...		Potri.018G079300 [exp]	11.61	0.9185

Compare expression of checked genes

Potri.009G011900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.