Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP86A19,Pt-CYP86.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G58860 828 / 0 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) AT4G00360 673 / 0 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G63710 665 / 0 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT2G45970 660 / 0 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) AT1G01600 653 / 0 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT5G23190 438 / 6e-149 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 430 / 7e-147 Cytochrome P450 superfamily protein (.1) AT1G24540 392 / 9e-132 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) AT1G13140 384 / 2e-128 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT1G13150 380 / 1e-126 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G249700 [exp] 941 / 0 AT5G58860 790 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.003G129100 [exp] 686 / 0 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.014G085800 [exp] 673 / 0 AT2G45970 866 / 0.0 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Potri.007G072100 [exp] 431 / 3e-146 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 424 / 4e-143 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.008G183300 [exp] 398 / 6e-134 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.010G050100 [exp] 396 / 4e-133 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 357 / 4e-118 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.008G088900 [exp] 357 / 6e-118 AT1G69500 868 / 0.0 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040687 [exp] 842 / 0 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 840 / 0 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 658 / 0 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10014768 [exp] 611 / 0 AT4G00360 756 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) Lus10024644 [exp] 462 / 9e-161 AT1G63710 562 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10010193 [exp] 422 / 5e-143 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10017394 [exp] 421 / 4e-142 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 386 / 1e-128 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10006232 [exp] 349 / 2e-114 AT1G24540 524 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Lus10037157 [exp] 345 / 2e-113 AT1G69500 868 / 0.0 "cytochrome P450, family 704, subfamily B, polypeptide 1", cytochrome P450, family 704, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.009G043700.1 pacid=42772188 polypeptide=Potri.009G043700.1.p locus=Potri.009G043700 ID=Potri.009G043700.1.v4.1 annot-version=v4.1 ATGGAAACCTTGCCTTTCCTCTTAACCCTCGCAGCTGCTACATCAGTTTATCTACTATGGTTCTATCTCCTAGCCCGTAAACTTACCGGCCCAAAAGTAT GGCCTATAGTGGGTAGCCTTCCATTACTGTTCGTGAACCGGAGAAATTTCCATGATTGGCTTGCTGCTAACCTCCGTGCAACTGGTGGTGCCGGAACCTA CCAGACGTGCACAATAGCACTTCCTTTCTTTGCTCGCAAACAAGGATTCTACACAGTCACTTGCCACCCCAAAAACATGGAACATATTCTTCGAACCAAG TTTGATAACTATCCCAAAGGACCCGAATGGCAAACTGCGTTTCATGATCTTTTAGGCCAGGGGATCTTTAATAGTGATGGAGAAACGTGGCTCATTCAAC GCAAAACTGCAGCTTTAGAGTTCACTACTCGGACTTTACGGCAAGCCATGGCTCGATGGGTGAACCAGACAATCAAGAATCGTCTGTGGAACATTTTGGA CAAGGCAGTTACAGAGAAGCATTCGGTGGACTTGCAAGAATTATTGCTTCGCTTAACCTTCGACAACATATGTGGACTCACATTTGGCAAGGATCCAGAG ACTCTCTCGCCAGAAATGCCAGAAAATCCATTTGCTATTGCCTTTGACACGGCCACTGAGGCTACTCTACAGAGGCTTCTTTACCCTGGTATCTTGTGGA GAGTGGAGAAGCTCTTAGGAATTGGAGCAGAGAGGAGATTAAAGAAGAGCCTCGAAGTTGTGGAAACATACATGGATGATGCCATCGCAGCACGCAAAGA AAACCCGTCTGATGATTTATTATCACGATTCATGAAGAAGAGAGACGTTGAAGGTAACCACTTTCCAATCTCTGTTCTGCAACGAATTGCTCTCAACTTT GTCCTTGCCGGCCGCGACACCTCATCTGTTGCTCTTAGCTGGTTCTTCTGGCTAGTCATGAACCATCCTGAAGTCGAAGCAAAGATAATCAAGGAAATAT CAGCTATACTCACGGAAACACGTGGAAATGATCGCCAGAAATGGCTTGATGAGCCTTTAGTCTTTGATGAAGCTGATAAACTGGTTTATCTCAAAGCAGC ATTAGCTGAAACATTGCGTTTATACCCGTCAGTACCACAAGACTTCAAATACGTCGTGGAAAACGATGTTCTGCCCGACGGTACACATGTACCAGCTGGT TCAACGATTACGTATTCTATTTATTCTGTTGGAAGGATGAAGAGCATATGGGGCGAGGACTGCATGGAATTTAAACCAGAGCGATGGCTATCGCCAGAAG AGGACAAGTTTGAGCCACCTAAAGATGGCTACAAGTTTGTGGCCTTTAATGCTGGACCCAGGACTTGCCTAGGGAAGGACTTGGCTTACTTGCAAATGAA GTCCGTGGCTTCTGCTGTGCTGTTGCGCTACCGTTTATCACTGGTTCCTGGTCACCGTGTAGAGCAGAAGATGTCTCTTACATTGTTCATGAAGAATGGG CTCCACGTACTCTTGCATCCACGTACTCTTGCATAG
AA sequence Show only first row Show all	>Potri.009G043700.1 pacid=42772188 polypeptide=Potri.009G043700.1.p locus=Potri.009G043700 ID=Potri.009G043700.1.v4.1 annot-version=v4.1 METLPFLLTLAAATSVYLLWFYLLARKLTGPKVWPIVGSLPLLFVNRRNFHDWLAANLRATGGAGTYQTCTIALPFFARKQGFYTVTCHPKNMEHILRTK FDNYPKGPEWQTAFHDLLGQGIFNSDGETWLIQRKTAALEFTTRTLRQAMARWVNQTIKNRLWNILDKAVTEKHSVDLQELLLRLTFDNICGLTFGKDPE TLSPEMPENPFAIAFDTATEATLQRLLYPGILWRVEKLLGIGAERRLKKSLEVVETYMDDAIAARKENPSDDLLSRFMKKRDVEGNHFPISVLQRIALNF VLAGRDTSSVALSWFFWLVMNHPEVEAKIIKEISAILTETRGNDRQKWLDEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVENDVLPDGTHVPAG STITYSIYSVGRMKSIWGEDCMEFKPERWLSPEEDKFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSLVPGHRVEQKMSLTLFMKNG LHVLLHPRTLA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G58860		CYP86A1	"cytochrome P450, family 86, s...		Potri.009G043700 [exp]	0	1	CYP86A19,Pt-CYP86.4
AT4G20390			Uncharacterised protein family...		Potri.011G154900 [exp]	1.00	0.9912
AT1G68850			Peroxidase superfamily protein...		Potri.010G134500 [exp]	1.41	0.9886
AT1G53270		ABCG10	ATP-binding cassette G10, ABC-...		Potri.001G393300 [exp]	2.44	0.9842	3
AT2G23540			GDSL-like Lipase/Acylhydrolase...		Potri.007G036300 [exp]	4.47	0.9743
AT5G58860		CYP86A1	"cytochrome P450, family 86, s...		Potri.001G249700 [exp]	5.19	0.9626	CYP86.5
AT1G29000			Heavy metal transport/detoxifi...		Potri.014G178800 [exp]	5.47	0.9712
AT3G18400	NAC	ANAC058	NAC domain containing protein ...		Potri.012G056300 [exp]	5.65	0.9787
AT5G41040			HXXXD-type acyl-transferase fa...		Potri.001G326300 [exp]	7.48	0.9683
AT5G23190		CYP86B1	"cytochrome P450, family 86, s...		Potri.005G092200 [exp]	8.94	0.9680
					Potri.017G046750 [exp]	11.18	0.9393

Compare expression of checked genes

Potri.009G043700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.