Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	NADK1.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G21070 755 / 0 NADK1, ATNADK-1 NAD kinase 1 (.1.2) AT1G21640 271 / 3e-80 ATNADK2, NADK2, ATNADK-2 NAD kinase 2 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G256100 [exp] 931 / 0 AT3G21070 774 / 0.0 NAD kinase 1 (.1.2) Potri.002G078700 [exp] 276 / 1e-81 AT1G21640 1191 / 0.0 NAD kinase 2 (.1.2) Potri.005G182600 [exp] 273 / 4e-81 AT1G21640 699 / 0.0 NAD kinase 2 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003178 [exp] 812 / 0 AT3G21070 768 / 0.0 NAD kinase 1 (.1.2) Lus10009958 [exp] 727 / 0 AT3G21070 700 / 0.0 NAD kinase 1 (.1.2) Lus10000856 [exp] 268 / 6e-79 AT1G21640 1205 / 0.0 NAD kinase 2 (.1.2) Lus10029717 [exp] 261 / 3e-76 AT1G21640 1154 / 0.0 NAD kinase 2 (.1.2) Lus10028677 [exp] 245 / 1e-69 AT1G21640 1112 / 0.0 NAD kinase 2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0240 [poplar] [flax] PFK PF01513 [poplar] [flax] NAD_kinase ATP-NAD kinase
Representative CDS sequence Show only first row Show all	>Potri.009G051500.3 pacid=42772160 polypeptide=Potri.009G051500.3.p locus=Potri.009G051500 ID=Potri.009G051500.3.v4.1 annot-version=v4.1 ATGGCTCCTAGCAAGCTCAATTCCACTGATCCACATGAAAATGGAGACGCAAGTTTTTCGTCTTCACAGCCGGACAATGGATCTAGTGATTCACTTACGC TTTTCCATTCCGAGAAGGCAGTGCAGGAGCTTCTTCAACAGACTCCAATTCAGCAAACTGATGACCATCTTATAGAATTCTCAGAGGCTCTCAGAACTGT TGCAAAGGCATTAAGACGAGCTGCTGAAGGAAAGGCTTCCGCTCAAGCTGAGGCTGCTGAATGGAAACGTAGATTTGAACTGGAAAGGGCACGGAATCAG CAACTAGAGCGCAAAGGCAACAATATATGTGAAATGCTTCAAAGTTGGTGGACTCAGACTTCTATATATAATGCAAGGGGAATGATAAGATTAATGCTTC CGTGTCTTGTTTGCTGGGAAGTTTGGGAAGAACGAAATAGGAGAGTTTCTGAAGGAAAGTCACCAGGGGAGTGTAATGCTGATATTGATGCTCAGCGGGT GGAAAACTCGACTAATCAACCCATGCTGAGAAATGAAACAATTGAACAATCTGAAAATTGTAGTACAAATGGGCTTTGCTCTCATGAAATTCTTCATGAT GGAGGGACCGACTCCCAAGCCAAAGCAGTTCCAAACAGAATTATGAGAAAGGCATCTTTCAAGCTTTCATGGCGGTGCAAAGGTGATATTAGTGATCAAC ACAAACATGATATTGTCTCTTTTGAAAGAGGAAATATAACAGCTGCAGGGCGCAGCAGTAAACAGATTTCTTTGAAGTGGGAATCTGACCCACAGACTGT GCTGATTATGACCAAACCAAATTCAACCTCTGTTCGGATTCTATGTGCAGAAATGGTCAGATGGTTGAAAGATCATAAAAAGTTAAACATTTATGTGGAA CCACGAGTGATGGGTGAACTTCTATCAGAATCATCATACTTCAACTTTGTGCATACATGGAAAGATGAGAAGGAAGTTTTGAGCCTGCACACAAAAGTTG ACCTTGTCGTGACTCTTGGTGGGGATGGCACTGTTCTTTGGGCAGCATCAATGTTCAAAGGACCAGTTCCCCCAATTGTACCGTTTTCTTTGGGGTCTCT TGGCTTTATGACACCATTCTATAGTGAACATTACCGAGATTGCCTTGATTCAGTCCTTAGGGGTCCAATCAGTATAACATTACGACACCGGTTGCAATGC TATGTTATTAGAGATGCCGCTAAAAATGAGTACGAAATGGAGGAGCCTATACTTGTTTTGAATGAGGTTACAATCGACCGTGGAATATCATCATTCCTTA CAAATTTGGAATGCTATTGTGACAACTCTTTTGTCACATGTGTCCAAGGTGATGGATTAATTTTATCAACAACATCAGGTAGCACTGCATATTCATTGGC AGCTGGAGGATCAATGGTTCATCCTCAGGTCCCTGGCATTCTCTTCACTCCAATCTGTCCACATTCCTTATCGTTTCGACCTCTGATATTACCTGAACAT GTAACAATACGAGTTCAAGTTCCATTCAACAGCAGAAGCCCTGCTTGGGCCTCATTTGATGGTAAGGACAGGAAACAGTTGGCAGCTGGTGATGCACTTG TGTGCAGCATGGCACCATGGCCTGTGCCAACAGCATGCCAAATTGATTCTACAAACGACTTTTTGCGAAGTATCCACGATGGCCTCCACTGGAATCTTAG AAAGACCCAATCTTTTGATGGCCCTCGGGATTTATAA
AA sequence Show only first row Show all	>Potri.009G051500.3 pacid=42772160 polypeptide=Potri.009G051500.3.p locus=Potri.009G051500 ID=Potri.009G051500.3.v4.1 annot-version=v4.1 MAPSKLNSTDPHENGDASFSSSQPDNGSSDSLTLFHSEKAVQELLQQTPIQQTDDHLIEFSEALRTVAKALRRAAEGKASAQAEAAEWKRRFELERARNQ QLERKGNNICEMLQSWWTQTSIYNARGMIRLMLPCLVCWEVWEERNRRVSEGKSPGECNADIDAQRVENSTNQPMLRNETIEQSENCSTNGLCSHEILHD GGTDSQAKAVPNRIMRKASFKLSWRCKGDISDQHKHDIVSFERGNITAAGRSSKQISLKWESDPQTVLIMTKPNSTSVRILCAEMVRWLKDHKKLNIYVE PRVMGELLSESSYFNFVHTWKDEKEVLSLHTKVDLVVTLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEHYRDCLDSVLRGPISITLRHRLQC YVIRDAAKNEYEMEEPILVLNEVTIDRGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEH VTIRVQVPFNSRSPAWASFDGKDRKQLAAGDALVCSMAPWPVPTACQIDSTNDFLRSIHDGLHWNLRKTQSFDGPRDL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G21070		NADK1, ATNADK-1	NAD kinase 1 (.1.2)		Potri.009G051500 [exp]	0	1	NADK1.2
AT1G43910			P-loop containing nucleoside t...		Potri.007G019600 [exp]	3.31	0.8753
AT5G17680			disease resistance protein (TI...		Potri.019G070300 [exp]	4.24	0.8624
AT3G26020			Protein phosphatase 2A regulat...		Potri.008G179900 [exp]	6.32	0.8384
AT1G67310	CAMTA		Calmodulin-binding transcripti...		Potri.003G170600 [exp]	6.32	0.8369
AT3G55960			Haloacid dehalogenase-like hyd...		Potri.010G188500 [exp]	6.92	0.8151
AT5G10290			leucine-rich repeat transmembr...		Potri.005G074200 [exp]	9.64	0.8391
AT1G53440			Leucine-rich repeat transmembr...		Potri.001G386300 [exp]	12.96	0.8193
AT5G02230			Haloacid dehalogenase-like hyd...		Potri.006G086900 [exp]	13.78	0.8034
AT3G48520		CYP94B3	cytochrome P450, family 94, su...		Potri.005G220700 [exp]	16.97	0.8231	Pt-CYP94.7
AT3G06490	MYB	BOS1, AtMYB108	BOTRYTIS-SUSCEPTIBLE1, myb dom...		Potri.008G101400 [exp]	20.14	0.8072	MYB108.2

Compare expression of checked genes

Potri.009G051500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.