Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	UF3.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G17050 358 / 6e-120 UGT78D2 UDP-glucosyl transferase 78D2 (.1) AT1G30530 315 / 4e-103 UGT78D1 UDP-glucosyl transferase 78D1 (.1) AT5G17040 311 / 7e-102 UDP-Glycosyltransferase superfamily protein (.1) AT5G17030 312 / 8e-102 UGT78D3 UDP-glucosyl transferase 78D3 (.1) AT3G11340 161 / 2e-44 UGT76B1 UDP-dependent glycosyltransferase 76B1, UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 158 / 2e-43 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT5G05860 158 / 3e-43 UGT76C2 UDP-glucosyl transferase 76C2 (.1) AT5G05870 155 / 3e-42 UGT76C1 UDP-glucosyl transferase 76C1 (.1) AT3G02100 154 / 7e-42 UDP-Glycosyltransferase superfamily protein (.1) AT2G43840 154 / 1e-41 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G133300 [exp] 725 / 0 AT5G17050 371 / 8e-125 UDP-glucosyl transferase 78D2 (.1) Potri.013G143900 [exp] 396 / 8e-135 AT5G17050 518 / 0.0 UDP-glucosyl transferase 78D2 (.1) Potri.013G118700 [exp] 395 / 1e-134 AT5G17050 533 / 0.0 UDP-glucosyl transferase 78D2 (.1) Potri.006G171268 [exp] 332 / 5e-110 AT5G17050 389 / 5e-132 UDP-glucosyl transferase 78D2 (.1) Potri.006G171100 [exp] 331 / 2e-109 AT5G17050 392 / 2e-133 UDP-glucosyl transferase 78D2 (.1) Potri.018G096000 [exp] 316 / 2e-103 AT5G17050 408 / 1e-139 UDP-glucosyl transferase 78D2 (.1) Potri.006G171156 [exp] 268 / 4e-86 AT5G17050 343 / 1e-115 UDP-glucosyl transferase 78D2 (.1) Potri.006G171128 [exp] 200 / 3e-61 AT5G17050 254 / 1e-82 UDP-glucosyl transferase 78D2 (.1) Potri.017G091500 [exp] 175 / 2e-49 AT3G02100 454 / 9e-158 UDP-Glycosyltransferase superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025854 [exp] 311 / 2e-101 AT5G17050 523 / 0.0 UDP-glucosyl transferase 78D2 (.1) Lus10016460 [exp] 174 / 3e-49 AT5G59590 400 / 2e-136 UDP-glucosyl transferase 76E2 (.1) Lus10040725 [exp] 170 / 1e-47 AT5G59590 408 / 9e-140 UDP-glucosyl transferase 76E2 (.1) Lus10021438 [exp] 169 / 8e-47 AT2G36970 534 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016126 [exp] 169 / 9e-47 AT2G28080 551 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10021437 [exp] 167 / 3e-46 AT2G36970 530 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10016128 [exp] 166 / 6e-46 AT2G36970 558 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10040246 [exp] 159 / 2e-43 AT3G11340 488 / 3e-171 UDP-dependent glycosyltransferase 76B1, UDP-Glycosyltransferase superfamily protein (.1) Lus10004671 [exp] 158 / 4e-43 AT3G55700 450 / 4e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10016459 [exp] 158 / 7e-43 AT5G59590 357 / 3e-119 UDP-glucosyl transferase 76E2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.009G078400.1 pacid=42772207 polypeptide=Potri.009G078400.1.p locus=Potri.009G078400 ID=Potri.009G078400.1.v4.1 annot-version=v4.1 ATGCATGTTGCCGTCTTTGCATTCCCATTTGGTTGCCATGCTCTTTCTCTAATTAATCTAGTGCAGAAGTTAGCAAGGGCTGCGCAGGAAACACAATTTT CCTTTCTTAACACAGAAGAATCCAATAATTCAATCTTCTTAGCATCAAGAACCAACCTGCCTGATAACATAAAAACCTACAATGTAGCGGATGGCGTGCC GCTGAATCATGTATTTTCAGGAGATCCAATAGAAAGAGTTGAGCTATTCATAAAAGAAACGCCAAAAAACTTTAAGATGGCACTGGACATGGCGGTGGCA GAAACTGGCCAAAAAATAAGCTGCTTGATAGCAGATGCGTTCTTGTCCTTTTCCGGATCAGTCGCTGAGGATTTGAGCATTCCTTGGATCCCAGTTTGGA TCCCAGTGCCCCATTCCCTCTCTACACACATTTATACTGATATGATTCGCCAACACTACGCCAATTCTCTTAGTTATGGTTGCAGCAATAGTTGCAGAGA TGGCAACGATGTAGAGCTTGAAGAAAAAACCTTGGAAATCCCAGGATTATCTGAGTTGCACATTGCGGATTTACCTGTAGAAGTGTTACCAAGAGATGCA CAAGAAACACCCTTTTCTTGCTTGTTAGGTCAAATTGGAAACATGGTGCTAAAAGTAGATACTCTAGTTGTGAACTTTTACCTAGAGCTCTACCCTAAAC CCCTCTTAAATGATCTCAAATCCAAGTTTTCGAACTTGCTAAATGTCGGCTTTATTAGCTTGTCTATGCCTCCACCATCGTTGCCACCGTCAACTGAAGA TACCACAGGCTGTCTATCATGGTTGGATAGCCAAAACTCTAAGACGGTGGCGTATATCAGCTTTGGAACTGTAGCGAATATTCCTCAAAGTGAGATAGAA GAACTAGCAGAAGCTCTTGAAGTGAGCAGAATTCCATTCCTTTGGTCTCTTAGGGACAATATAAAGGATTGCTTGCCAAATGGGTTCCTAGAAAGGACTA TAATGCACGGAAAGGTGGTTCCATGGGCACCTCAGACCCAAGTATTGGCACATAGCTCAACAGGTGTCTTTATGACACATTGTGGAGCTAATTCTGTGTA TGAGAGTATTGCAAATGGGGTTCCAATGATCTGTAGACCATTTTTTGCGGACAATAAACTGAATGCACGATTAATAGTGGACGTTTGGAGAATTGGTGAG AGAATTGATGGAGGTGTTTTTACGAAGACCGGAGTTGCCAAGAGCTTGGACCTCATTTTGCAACATGAACAGGGGAGAAGAATTCGGAGCAGAGTCCAAG CCGTTAAAGAGCTTGTATTGAAGGCATCTGCGCCTGGTGGCCATGCTACACAAGCTTTCAAAACTTTGGTGGAAAAGATCACATTGGTGTAA
AA sequence Show only first row Show all	>Potri.009G078400.1 pacid=42772207 polypeptide=Potri.009G078400.1.p locus=Potri.009G078400 ID=Potri.009G078400.1.v4.1 annot-version=v4.1 MHVAVFAFPFGCHALSLINLVQKLARAAQETQFSFLNTEESNNSIFLASRTNLPDNIKTYNVADGVPLNHVFSGDPIERVELFIKETPKNFKMALDMAVA ETGQKISCLIADAFLSFSGSVAEDLSIPWIPVWIPVPHSLSTHIYTDMIRQHYANSLSYGCSNSCRDGNDVELEEKTLEIPGLSELHIADLPVEVLPRDA QETPFSCLLGQIGNMVLKVDTLVVNFYLELYPKPLLNDLKSKFSNLLNVGFISLSMPPPSLPPSTEDTTGCLSWLDSQNSKTVAYISFGTVANIPQSEIE ELAEALEVSRIPFLWSLRDNIKDCLPNGFLERTIMHGKVVPWAPQTQVLAHSSTGVFMTHCGANSVYESIANGVPMICRPFFADNKLNARLIVDVWRIGE RIDGGVFTKTGVAKSLDLILQHEQGRRIRSRVQAVKELVLKASAPGGHATQAFKTLVEKITLV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G17050		UGT78D2	UDP-glucosyl transferase 78D2 ...		Potri.009G078400 [exp]	0	1	UF3.3
AT2G04032		ZIP7	zinc transporter 7 precursor (...		Potri.010G134300 [exp]	3.46	0.8090	Pt-ZIP7.2
					Potri.003G097900 [exp]	11.31	0.8140
AT5G39850			Ribosomal protein S4 (.1)		Potri.006G209900 [exp]	14.83	0.8163
AT3G05950			RmlC-like cupins superfamily p...		Potri.011G163200 [exp]	17.66	0.8050	Pt-GER2.29
AT1G48130		ATPER1	1-cysteine peroxiredoxin 1 (.1...		Potri.008G099900 [exp]	27.54	0.7745
AT2G07560		AHA6	H\(+\)-ATPase 6, H\(+\)-ATPase...		Potri.001G048300 [exp]	27.92	0.7485	Pt-HA1.2
AT1G21340	DOF	AtDof1,2	Dof-type zinc finger DNA-bindi...		Potri.005G188900 [exp]	31.74	0.7494
AT4G33010		ATGLDP1	glycine decarboxylase P-protei...		Potri.018G053680 [exp]	34.40	0.7698
AT1G13410			Tetratricopeptide repeat (TPR)...		Potri.010G123901 [exp]	43.63	0.7466
AT3G17240		mtLPD2, LPD2	lipoamide dehydrogenase 2 (.1....		Potri.010G151400 [exp]	45.28	0.8065	LPD2

Compare expression of checked genes

Potri.009G078400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.