Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP707.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G19270 710 / 0 CYP707A4 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) AT4G19230 571 / 0 CYP707A1 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) AT5G45340 565 / 0 CYP707A3 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) AT2G29090 545 / 0 CYP707A2 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) AT1G05160 279 / 1e-88 ATKAO1, CYP88A3 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) AT2G32440 263 / 2e-82 ATKAO2, CYP88A4, KAO2 ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, ent-kaurenoic acid hydroxylase 2 (.1.2) AT1G12740 258 / 9e-81 CYP87A2 "cytochrome P450, family 87, subfamily A, polypeptide 2", cytochrome P450, family 87, subfamily A, polypeptide 2 (.1.2) AT5G38970 254 / 2e-79 ATBR6OX, CYP85A1, BR6OX1 brassinosteroid-6-oxidase 1 (.1.2.3) AT3G30180 251 / 4e-78 CYP85A2, BR6OX2 brassinosteroid-6-oxidase 2 (.1) AT5G05690 241 / 5e-74 CBB3, DWF3, CYP90A1, CYP90A, CPD DWARF 3, CYTOCHROME P450 90A1, CONSTITUTIVE PHOTOMORPHOGENIC DWARF, CABBAGE 3, Cytochrome P450 superfamily protein (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G140900 [exp] 853 / 0 AT3G19270 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.014G029100 [exp] 702 / 0 AT3G19270 665 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.002G126100 [exp] 695 / 0 AT3G19270 666 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.004G235400 [exp] 565 / 0 AT4G19230 778 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Potri.009G033900 [exp] 545 / 0 AT2G29090 677 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.001G242600 [exp] 537 / 0 AT2G29090 652 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.002G069600 [exp] 274 / 8e-87 AT5G45340 296 / 1e-95 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Potri.004G117700 [exp] 263 / 6e-83 AT5G38970 655 / 0.0 brassinosteroid-6-oxidase 1 (.1.2.3) Potri.019G078600 [exp] 260 / 2e-81 AT5G36110 476 / 2e-165 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042652 [exp] 647 / 0 AT3G19270 647 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10021725 [exp] 647 / 0 AT3G19270 633 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10019858 [exp] 641 / 0 AT3G19270 643 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10012675 [exp] 607 / 0 AT3G19270 586 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10033308 [exp] 535 / 0 AT5G45340 732 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10035685 [exp] 531 / 0 AT4G19230 714 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Lus10034768 [exp] 529 / 0 AT5G45340 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10016515 [exp] 464 / 4e-161 AT2G29090 554 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Lus10040785 [exp] 384 / 8e-122 AT1G07510 1078 / 0.0 FTSH protease 10 (.1) Lus10037273 [exp] 342 / 2e-114 AT4G19230 461 / 2e-161 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.009G101700.2 pacid=42771174 polypeptide=Potri.009G101700.2.p locus=Potri.009G101700 ID=Potri.009G101700.2.v4.1 annot-version=v4.1 ATGGAGGTTGCTTCTATTTTAATATGCCTCTTTCTTTCTAGCCTTCTCTCTTATCCCCTCTTAAAGAAGATGCGGAGGCCCTGGAGGATACCTAAACAAA GAGCAAAGCTTCCTCCGGGTTCAATGGGCTGGCCTTTTGTAGGTGAAACTCTCCAACTTTATACTCAAGACCCAAATGTCTTCTTTGTTACGAGGCAAAA AAGATATGGAGAAGTATTCAAAAGCCACATACTTGGCTGCCCTTGTGTTATGCTAGCTAACCCTGAGGGTGCAAGATTTGTGCTGGTGACTCATGCTCAA CTGTTCAAGCCTACATACCCCAAAAGCAAAGAGAAGATGATTGGCCCTTCAGCTCTCTTTTTTCACCAGGGAAATTACCACAATCTTATAAGGAAGTTGG TTCAAAGTTCTTTATCCCCAGACACAATCCGGAAACTAATTCCCAGCATCGAATCCGTAGCCATCTCTGCCTTAGAATCATGGTCCAGTGGGCATATCAT CAACACCTTTCATGAAATGAAGAAGTTTTCTTTTGACGTCGGCATTCTTTCTATCTTTGGTCACTTGAACAGCAACTTTAGACAGATGCTGAATGACAAC TACCACATAGTAGATAAGGGTTACAATTCATTTCCAACAAAAATTCCAGGAACTGCTTACCACAAAGCTCTTTCGGCAAGGAAAAGGCTTAATCAAATAC TGAGTGAGATAATTTGTGAGAGGAAAGAGAAAGGACTACTAGAGAAGGATTTCTTGGGTAATCTTCTGAACTTCAAAAATGAGAAGGGAGAAATCCTAAC TGAAGATCAAATTGCTGACAACATTATAGGAGTACTTTTTGCTGCTCAGGACACGACAGCTAGTGTTCTGACATGGATTCTAAAATATCTCCATGATGAC CAAAAACTCCTAGAAGATGTTAAGGCAGAGCAAATGGCGATATACGAAGCGAATGGAAGAGGAGAGAAGCCCCTGACATGGGCGCAGACGAGAAATATGC CACTTACATACAGGGTTATACTAGAGAGCTTGAGGATGGCAAGCATAATATCTTTCACATTCAGGGAAGCAATAGTTGATGTTGAGTACCATGGATACCT AATACCAAAGGGATGGAAGGTGTTGCCGTTGTTCAGGAACATTCATCACAACCCAGAATTCTTTCCTGATCCTCGCATTTTCGACCCATCAAGGTTTGAG ATTGCCCCCAAACCCAACACTTTCATGCCATTTGGAAATGGAGTGCATGCTTGCGCTGGCAATGAGATTGCCAAGCTGGAGATGTTTGTCTTGATCCATC ATCTAGTGACCAGATTCAGGTGGGAAGTGGTGGGATCACAAAACGGGATTCAATACGGCCCATTTCCTGTACCCCATCAAGGACTCCCAGCCAGATTTTG GAAAGAACCCGTCAATCTCGAATAA
AA sequence Show only first row Show all	>Potri.009G101700.2 pacid=42771174 polypeptide=Potri.009G101700.2.p locus=Potri.009G101700 ID=Potri.009G101700.2.v4.1 annot-version=v4.1 MEVASILICLFLSSLLSYPLLKKMRRPWRIPKQRAKLPPGSMGWPFVGETLQLYTQDPNVFFVTRQKRYGEVFKSHILGCPCVMLANPEGARFVLVTHAQ LFKPTYPKSKEKMIGPSALFFHQGNYHNLIRKLVQSSLSPDTIRKLIPSIESVAISALESWSSGHIINTFHEMKKFSFDVGILSIFGHLNSNFRQMLNDN YHIVDKGYNSFPTKIPGTAYHKALSARKRLNQILSEIICERKEKGLLEKDFLGNLLNFKNEKGEILTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDD QKLLEDVKAEQMAIYEANGRGEKPLTWAQTRNMPLTYRVILESLRMASIISFTFREAIVDVEYHGYLIPKGWKVLPLFRNIHHNPEFFPDPRIFDPSRFE IAPKPNTFMPFGNGVHACAGNEIAKLEMFVLIHHLVTRFRWEVVGSQNGIQYGPFPVPHQGLPARFWKEPVNLE

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G19270		CYP707A4	"cytochrome P450, family 707, ...		Potri.009G101700 [exp]	0	1	CYP707.4
AT2G47270	bHLH	bHLH151, UPB1	UPBEAT1, sequence-specific DNA...		Potri.018G099201 [exp]	5.00	0.9201
AT5G09970		CYP78A7	"cytochrome P450, family 78, s...		Potri.005G084500 [exp]	6.16	0.9197
AT2G44480		BGLU17	beta glucosidase 17 (.1.2)		Potri.001G227300 [exp]	9.64	0.9102
AT2G44480		BGLU17	beta glucosidase 17 (.1.2)		Potri.001G227400 [exp]	13.85	0.8995
AT2G27240			Aluminium activated malate tra...		Potri.001G217200 [exp]	14.83	0.8985
AT5G66800			unknown protein		Potri.007G042600 [exp]	16.58	0.8607
AT3G57670	C2H2ZnF	WIP2, NTT	WIP domain protein 2, NO TRANS...		Potri.001G267900 [exp]	18.97	0.8601
AT5G04530		KCS19	3-ketoacyl-CoA synthase 19 (.1...		Potri.010G212600 [exp]	20.34	0.8848
AT5G04190		PKS4	phytochrome kinase substrate 4...		Potri.007G074056 [exp]	22.58	0.8652
AT1G69940		ATPPME1	Pectin lyase-like superfamily ...		Potri.015G110700 [exp]	22.60	0.8787

Compare expression of checked genes

Potri.009G101700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.