Potri.009G131200 [POPLAR]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Flax homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Potri.009G131200.2 pacid=42772560 polypeptide=Potri.009G131200.2.p locus=Potri.009G131200 ID=Potri.009G131200.2.v4.1 annot-version=v4.1
ATGGAAAACGGGGTTGAGAGAGTTGTTGTGGAAGAGAAAACCAATGTGGGAAATGAAGGTTTTGGGGACAAGGTAGAGGAGGAGAGAGTTGTGGTGGGGT
CTGATGAATCAAAGGATTTGGAAGATGAGGTTTTTGAGGAGGCAATTGAATCACATGAGCAATTGCAGGAGGAGGAGGAGGAGGAGGGAATGAAAGTTGT
ATCAGACGGTGGTGTTTTTGAGAGTGTTGGCGATTTGATTTCAGCAGTTGTTGATGAGAGCTCAAATTTAGGAAACGAGACAGAGAAACTTGAAGAGGCT
CTTTTTATTCCTGCTGAGAGTGGGAATCCTGATGAGTTGGGTGGGGTTGTTGGTGAAGAGAAGGTAGAGGATTTGGTGGGCGAAGATAGTGTTGATAAGA
TTGATGAGGGAGGGACTGCAAAGGAAGCTAGGGGCAGTGAATCGAGTGGAGGAGAGGTTGCTGAGATCGTTGATAATGGAGTAACAGAGGTTTTGAAGGC
TGAGGGTGAAGGCGAGGTGGATTCTAAGCAGGGGATTAAATTGGATGAGGAGATTCTGCTCAAGGATGATGAGAGAGAAGAACTGAAGGAGGATGAGTTG
AGCACTGAATATCAGGGGACTAGTGGCAATTCAGGCATGAGCCAGAATTTGATAAAAATGGATGCTGAGCATTTAGATGAGAAAAGTGGGGAATTGAAAG
GTAACGGAGAGTCTGCTAAGGAAGATGGGAACAATGAATTGATTGGAGGTGAGGAGGTTTCTGAGATTACTGTTAATGGAGAAACTCAGGCTTTAAGGAG
TGAGGCTGAGGTCAATTCTAATCGAGAAATTGAGTCAAGCAAGGAATTGAATAATGATGGAGATTATGCTCAGGAAGTGGGGAACAATGAGACGAGTGGA
GATGCGGGGGTTTCTGAGATTGCTGGTAATATAGGAACAGAGGCTTTGAAGGGTGAGAATGAGGCTGATCCTAATCGAGAAATTTTGTTGAGCAAGGAGA
TTCTTCCTGAAGATGGTGAAAGAGAGGAACTGAAGGAGGATAACGCGGAGGTGTCTGAGATTGCTGGTAATATAGGAACAGAGGCTTTGAAGGGTGAGTA
TGAGGCTGATCCTGATCGAGAAATTGAACTGAGCAAGGAGATTCTTTCTGAAGATGGTGAAAGAGAGGAACTGAAGGAGGGTAATGCGGAGGTGTCTGAG
ATTGCTGGTAATATAGGAACAGAGGCTTTGAAGGGTGAGTGTGAGGCTGATCCTAATCGAGAAAGTGAGCTGAGCAAGGAGATTCTTTCTGAAGATGGTG
AAAGAGAGGAACTGAAGGAGGGTAATGCAGAGGTGTCTGAGATTGCTGGTAATATAGGAACAGAGGCTTTGAAGGGTGAATGTGAGGCTGATCCTAATCG
AGAAATTGAGCTGAGCAAGGAGATTCTTTCTGAAGATGGTGAAAGAGAGGAACTGAAGGAGGATAAGTTGGGTTCTGAATATCAGGAGGCCAATGAGTCA
ATTAATTTATCAGGTGATCTTCAAGGTGATAAGAGTGAAGGACTGGATGATAATCTGGAAAAACCAGATATAAAACATGATGTTGAGAAGAATGTGGATT
TTGACAGTGCAATAGTAGGCCTTGATGCTGGAATTGGGGTTCATAAGAGCGAACATTTCAGGGACATCTCAGCAGTTGTGGATACAGAAAACCATGATGA
TAGCAATGGGAAGTTGAAAGATGTTTCAGCTGTTATAGCTTCAGAGCAAAATGGGGAAACTCATGAACTGAAAGCTGCATCATCTGTCCCACAGACAGTC
GTGGAGGAAGTAAAGCTGGTACCAGGAGTTTTAGCCTCATCTTCTTTAGAGAAGTCAGTGACTGAGAGAAATGAGGAGATCCAGGCTTGTGCATCTAATG
TGCGAGCAGAGGATAACAAGGGTTCTGAAGTACATCATGCTGCCAACAATACTAATGGAGTCAGCAAAAGCACTACTGTGACTGAAGAGCCCAAGGAGAA
AGCAGACAAGGGTCAGGAGGATAAGCAAACTACTCCAGCAAATATAGAGCGAAAAATTAAGCATGTACCCAAGATTGCATCTTCATCTGCAAAATCTTCA
AGTGCAGCTCCCGCACCTTCTCGTCCAGCTGGCCTTGGGCGTGCTGCCCCACTATTGGAACCTGCACCCAGGGCAGTCCAGCAGCCTCGTGCTAATGGAG
CTGTTTCTCATACACAATCCCAACAGATTGAAGATCCTACAAACGGGGAATCAGAAGAGTTTGATGAGACTCGTGAAAAACTTCAGATGATCAGGGTGAA
ATTTTTGCGACTTGCACACAGACTAGGGCAGACTCCTCATAATGTTGTTGTTGCACAGGTTTTATACAGACTGGGATTAGCTGAACAGCTGCGAGGTAGA
AGTGGTGGCCGCGTTGCTGGTTTCAGTTTTGATCGTGCCAGTGCCATGGCAGAACAGCTTGAGGCTGCCGGGCAGGAACCCCTTGATTTCTCCTGTACAA
TTATGGTTCTTGGAAAGACAGGTGTTGGTAAAAGTGCCACTATCAATTCAATATTTGATGAAGTGAAGTTTGGCACAGATGCTTTTCAATTGGGTACAAA
AAAGGTTCAGGATGTTGTGGGCACTGTTCAGGGGATAAAGGTACGGGTCATTGACACACCAGGACTTCTTCCTTCATGGTCTGACCAGCGCCAGAATGAG
AAGATCCTTCACTCTGTTAAGCGCTTTATAAAGAAAACTCCTCCAGACATTGTGTTGTATCTTGACAGGTTGGACATGCAGAGCAGGGATTTTGGTGATA
TGCCCCTCTTGCGTACCATCACTGACATATTTGGTCCATCTATATGGTTTAATGCAATTGTTGTCTTGACCCATGCGGCATCAGCTCCACCTGATGGCCC
AAATGGTACTGCTTCAAGTTATGATATGTTTGTCACTCAGCGCTCGCATGCTGTCCAACAAGCAATTCGTCAGGCAGCTGGAGATATGCGACTCATGAAT
CCTGTTTCATTGGTTGAGAACCACTCAGCATGTAGAACTAATAGGGCAGGGCAGAGAGTGTTGCCAAATGGTCAGGTTTGGAAGCCCCATTTATTGCTGC
TCTCTTTTGCATCTAAGATTCTTGCTGAGGCGAATGCACTTTTGAAGCTGCAAGATAGTACACCTGCAAAGCCTTTTGCAACTCGATCAAGAGCACCTCC
TTTACCGTTCCTTCTTTCATCCCTTCTCCAGTCAAGACCTCAAGTTAAGCTGCCAGAGGAACAGTATGGCGGAGAGGATGGTTTAGATGATGATTTAGAT
GACTCATCAGATTCTGAGGATGAATCAGAATATGATGAATTGCCACCATTTAAAAGTTTGACAAGGGCTCAGATTTCGAAGCTTACTAAAGCTCAGAAGA
AGGCATATTTTGATGAGTTAGAATACAGAGAGAAACTTTTCATGAAAAAACAGTTGAAGGAGGAGAAAAGGCGACAGAAGATGATGAAGAAAATGGCTGC
AGCTGCAAAGGACCTGCCTAGTGAGTACATTGAAAATGCAGAAGAAGAAGGTGGAGGAGCTGCATCTGTTCCTGTTCCCATGCCAGATTTAGCCTTACCT
GCTTCGTTTGATTCTGATAATCCCACTCACCGGTACCGTTATCTTGATACCTCCAACCAGTGGCTTGTGAGGCCAGTTCTAGAAACTCATGGCTGGGATC
ATGATGTTGGTTATGAAGGTATAAATGTGGAGAGGTTGTTTGTGGTTAAAGACAAGATACCTCTATCTTTTTCTGGCCAGGTAACAAAGGACAAGAAGGA
TGCCAGTGTTCAAATGGAATTAGCAAGTTCTGTAAAGCATGGAGAGGGAAAAGCAACTTCACTGGGGTTTGATATGCAGACCGTGGGAAAAGACTTGGCC
TATACTTTACGCAGTGAGACTAGGTTCAGTAATTTTAGGAAAAATAAGGCTACAGCTGGTCTCTCGGTTACTCTATTGGGTGATGTCTTATCAACTGGAG
TGAAAGTTGAGGATAAATTGATTGCTGGTAAGCGGTTCCAAATGGTCATGTCCGGTGGTGCAATGAGTGGTCGTGGTGATGTGGCTTATGGTGGCAGTTT
GGAGATCCAACTGAGAGACAAAGATTATCCTCTTGGTCGTTCATTATCAACACTTGGGCTTTCTGTCATGGACTGGCATGGAGATCTTGCCATTGGCTGC
AATTTACAATCCCAGATTCCTATAGGACGATCTACAAATTTGATTGGTCGTGCTAATTTGAATAACAGGGGAGCTGGACAAATCAGTATTCGCTTAAATA
GCTCAGAACAGCTTCAACTTGCTTTGATTGGCCTCATTCCTCTTTTGAAGAAGCTAATCGAGTATCCTCAACAATTGCAACTTGGACAATGA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Potri.009G131200.2 pacid=42772560 polypeptide=Potri.009G131200.2.p locus=Potri.009G131200 ID=Potri.009G131200.2.v4.1 annot-version=v4.1
MENGVERVVVEEKTNVGNEGFGDKVEEERVVVGSDESKDLEDEVFEEAIESHEQLQEEEEEEGMKVVSDGGVFESVGDLISAVVDESSNLGNETEKLEEA
LFIPAESGNPDELGGVVGEEKVEDLVGEDSVDKIDEGGTAKEARGSESSGGEVAEIVDNGVTEVLKAEGEGEVDSKQGIKLDEEILLKDDEREELKEDEL
STEYQGTSGNSGMSQNLIKMDAEHLDEKSGELKGNGESAKEDGNNELIGGEEVSEITVNGETQALRSEAEVNSNREIESSKELNNDGDYAQEVGNNETSG
DAGVSEIAGNIGTEALKGENEADPNREILLSKEILPEDGEREELKEDNAEVSEIAGNIGTEALKGEYEADPDREIELSKEILSEDGEREELKEGNAEVSE
IAGNIGTEALKGECEADPNRESELSKEILSEDGEREELKEGNAEVSEIAGNIGTEALKGECEADPNREIELSKEILSEDGEREELKEDKLGSEYQEANES
INLSGDLQGDKSEGLDDNLEKPDIKHDVEKNVDFDSAIVGLDAGIGVHKSEHFRDISAVVDTENHDDSNGKLKDVSAVIASEQNGETHELKAASSVPQTV
VEEVKLVPGVLASSSLEKSVTERNEEIQACASNVRAEDNKGSEVHHAANNTNGVSKSTTVTEEPKEKADKGQEDKQTTPANIERKIKHVPKIASSSAKSS
SAAPAPSRPAGLGRAAPLLEPAPRAVQQPRANGAVSHTQSQQIEDPTNGESEEFDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGR
SGGRVAGFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQLGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRQNE
KILHSVKRFIKKTPPDIVLYLDRLDMQSRDFGDMPLLRTITDIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHAVQQAIRQAAGDMRLMN
PVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSTPAKPFATRSRAPPLPFLLSSLLQSRPQVKLPEEQYGGEDGLDDDLD
DSSDSEDESEYDELPPFKSLTRAQISKLTKAQKKAYFDELEYREKLFMKKQLKEEKRRQKMMKKMAAAAKDLPSEYIENAEEEGGGAASVPVPMPDLALP
ASFDSDNPTHRYRYLDTSNQWLVRPVLETHGWDHDVGYEGINVERLFVVKDKIPLSFSGQVTKDKKDASVQMELASSVKHGEGKATSLGFDMQTVGKDLA
YTLRSETRFSNFRKNKATAGLSVTLLGDVLSTGVKVEDKLIAGKRFQMVMSGGAMSGRGDVAYGGSLEIQLRDKDYPLGRSLSTLGLSVMDWHGDLAIGC
NLQSQIPIGRSTNLIGRANLNNRGAGQISIRLNSSEQLQLALIGLIPLLKKLIEYPQQLQLGQ
|
DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.009G131200 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.