Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-FTSZ2.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36250 525 / 0 ATFTSZ2-1, FTSZ2-1 Tubulin/FtsZ family protein (.1.2) AT3G52750 514 / 0 FTSZ2-2 Tubulin/FtsZ family protein (.1) AT5G55280 296 / 8e-96 ATFTSZ1-1, CPFTSZ, FTSZ1-1 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G203100 [exp] 699 / 0 AT2G36250 613 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.006G083100 [exp] 501 / 3e-175 AT3G52750 647 / 0.0 Tubulin/FtsZ family protein (.1) Potri.001G359500 [exp] 292 / 1e-94 AT5G55280 547 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021367 [exp] 501 / 3e-175 AT3G52750 607 / 0.0 Tubulin/FtsZ family protein (.1) Lus10017047 [exp] 498 / 9e-174 AT2G36250 597 / 0.0 Tubulin/FtsZ family protein (.1.2) Lus10014196 [exp] 447 / 2e-154 AT3G52750 569 / 0.0 Tubulin/FtsZ family protein (.1) Lus10016579 [exp] 291 / 6e-94 AT5G55280 535 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10022718 [exp] 285 / 6e-93 AT3G52750 381 / 3e-131 Tubulin/FtsZ family protein (.1) Lus10002442 [exp] 242 / 1e-75 AT5G55280 479 / 6e-169 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10035091 [exp] 51 / 2e-06 AT1G75010 559 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1) Lus10031930 [exp] 45 / 0.0001 AT1G75010 549 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0566 [poplar] [flax] Tubulin PF00091 [poplar] [flax] Tubulin Tubulin/FtsZ family, GTPase domain CL0442 [poplar] [flax] Tubulin_C PF12327 [poplar] [flax] FtsZ_C FtsZ family, C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.009G164100.5 pacid=42770787 polypeptide=Potri.009G164100.5.p locus=Potri.009G164100 ID=Potri.009G164100.5.v4.1 annot-version=v4.1 ATGGCGACTTGTGTGTCTCCACCTTTCACGCCATCTGGTACTCAAATTTCAGTGAGACGAAGGATTTCAACAGAAAACCGAATTGGTAAAACAGTTATCT TCAAAAGGTTTGACAAGAAGAATGGTTCATGTGGTGCATATGAAAGGAATGTCTTCAGTATCCCACAAATTAGGTGTTCGGTTAACTCTCACAATATCAG CCCAAATCATAGCAAAGACTCTTTCCTGGATTTGCACCCCGAGGTTTCAATGCTCAGAAGTGATGCAAATGACACATACTCTTGTCTGAGAAAGGAGACA TCTGGAGTAAATGTCACTGAGAGCTCAGGGGATTCCTCCTTTATGAGCAACTACAATGAAGCCAAGATCAAGGTTATTGGTGTAGGGGGTGGTGGGTCTA ACGCTGTTAATAGAATGATTGAGAGTTCCCTGACCGGGGTGGATTTTTGGATAGTGAACACAGATATTCAGGCAATGAAGATGTCACCAGTGCTCCCAGA GAACCGTTTGCAAGTTGGCAAAGAGCTAACTAGAGGTCTGGGTGCTGGTGGAAACCCAGATGTAGGGATGAATGCTGCCAATGAAAGTAAAGCAGCAATA GAGGAGGCACTTTATGGTGCAGACATGGTCTTCATAACAGCTGGGATGGGTGGAGGAACTGGCACTGGTGGGGCTCCAGTGATTGCTAGTGTTGCAAAGT CCATGGGAATATTGACTGTTGGTATTGTGACAACACCATTCTCCTTTGAGGGCCGAAGACGTGCTGTTCAAGCTCAGGAGGGAATTGCTGCTCTGAGAAA CAATGTTGACACATTAATTGTTATTCCTAATGACAAGTTACTGACTGCTGTTTCTCTATCAACCCCAGTGACAGAGGCATTTAACTTGGCTGATGATATA CTTCGGCAAGGTGTTCGTGGCATCTCTGACATCATTATGGTGCCAGGTCTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATTATGAAAGATGCAGGTT CTTCTCTTTTGGGAATAGGAACTGCAACCGCAGGGAAGGCAAGGGCAAGAGACGCTGCATTGAACGCCATCCAATCACCTTTGTTGGATATTGGCATTGA ACGAGCTACTGGGATTGTGTGGAATATAACTGGTGGAACCGATTTAACTTTGTTTGAGGTGAATGCTGCTGCAGAGGTTATCTATGACCTCGTGGATCCA ACTGCAAACCTAATATTTGGAGCGGTGATAGATCCATCACTAACTGGTCAAGTAAGTTGGCAACGGAGAAATAACTGCAAAGCATGTTTATTTGTGATTA CTATGGTAACATGTAATATGGAGTATTCGTTTTCAAGAAAAATAAAAATAAAACAGAATAAGAAGAAAGGGAAAAGTCAAATTTCCGAGGATGAAATGGA CAATACAGATAGATTGATTACCCTTGCAGCATCACAACTTTGA
AA sequence Show only first row Show all	>Potri.009G164100.5 pacid=42770787 polypeptide=Potri.009G164100.5.p locus=Potri.009G164100 ID=Potri.009G164100.5.v4.1 annot-version=v4.1 MATCVSPPFTPSGTQISVRRRISTENRIGKTVIFKRFDKKNGSCGAYERNVFSIPQIRCSVNSHNISPNHSKDSFLDLHPEVSMLRSDANDTYSCLRKET SGVNVTESSGDSSFMSNYNEAKIKVIGVGGGGSNAVNRMIESSLTGVDFWIVNTDIQAMKMSPVLPENRLQVGKELTRGLGAGGNPDVGMNAANESKAAI EEALYGADMVFITAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRNNVDTLIVIPNDKLLTAVSLSTPVTEAFNLADDI LRQGVRGISDIIMVPGLVNVDFADVRAIMKDAGSSLLGIGTATAGKARARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDP TANLIFGAVIDPSLTGQVSWQRRNNCKACLFVITMVTCNMEYSFSRKIKIKQNKKKGKSQISEDEMDNTDRLITLAASQL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G36250		ATFTSZ2-1, FTSZ...	Tubulin/FtsZ family protein (....		Potri.009G164100 [exp]	0	1	Pt-FTSZ2.2
AT2G30570		PSBW	photosystem II reaction center...		Potri.002G044300 [exp]	6.24	0.9397
AT3G26060		ATPRXQ ,ATPRX Q	peroxiredoxin Q, Thioredoxin s...		Potri.018G063300 [exp]	7.93	0.9236	Pt-PRXQ.2,PtrcPrx_Q.2
AT4G13030			P-loop containing nucleoside t...		Potri.014G124300 [exp]	8.30	0.9353
AT4G05180		PSII-Q, PSBQ, P...	photosystem II subunit Q-2 (.1...		Potri.011G031300 [exp]	10.00	0.9362	Pt-PSBQ2.2
AT5G54190		PORA	protochlorophyllide oxidoreduc...		Potri.001G403300 [exp]	16.61	0.9199	PORA.2
AT1G74730			Protein of unknown function (D...		Potri.012G070600 [exp]	17.88	0.9319
AT5G59320		LTP3	lipid transfer protein 3 (.1)		Potri.016G135500 [exp]	20.68	0.9322
AT2G47140		AtSDR5	short-chain dehydrogenase redu...		Potri.015G065600 [exp]	22.31	0.9265
AT4G15510			Photosystem II reaction center...		Potri.013G006500 [exp]	23.06	0.9183
AT1G08380		PSAO	photosystem I subunit O (.1)		Potri.009G160800 [exp]	24.18	0.9229

Compare expression of checked genes

Potri.009G164100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.