Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G28290 1513 / 0 CHR3, SYD SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) AT3G06010 531 / 8e-161 ATCHR12 Homeotic gene regulator (.1) AT5G19310 519 / 2e-157 Homeotic gene regulator (.1) AT2G46020 466 / 2e-132 CHA2, ATBRM, CHR2, BRM CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) AT5G18620 370 / 8e-107 CHR17 chromatin remodeling factor17 (.1.2) AT3G06400 370 / 9e-107 CHR11 chromatin-remodeling protein 11 (.1.2.3) AT5G66750 330 / 4e-96 CHR01, CHA1, SOM1, CHR1, SOM4, DDM1, ATDDM1 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) AT2G13370 336 / 2e-92 CHR5 chromatin remodeling 5 (.1) AT4G31900 293 / 2e-80 PKR2 PICKLE RELATED 2, chromatin remodeling factor, putative (.1.2) AT2G25170 293 / 8e-80 CKH2, SSL2, GYM, CHD3, PKL, CHR6 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G195900 [exp] 2761 / 0 AT2G28290 1440 / 0.0 SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) Potri.008G149900 [exp] 532 / 6e-161 AT3G06010 1485 / 0.0 Homeotic gene regulator (.1) Potri.010G091200 [exp] 510 / 1e-153 AT3G06010 1408 / 0.0 Homeotic gene regulator (.1) Potri.014G086500 [exp] 461 / 1e-130 AT2G46020 2483 / 0.0 CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) Potri.002G160900 [exp] 461 / 2e-130 AT2G46020 2519 / 0.0 CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) Potri.010G021400 [exp] 371 / 4e-107 AT3G06400 1748 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.008G205600 [exp] 370 / 1e-106 AT3G06400 1724 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.019G129900 [exp] 338 / 6e-99 AT5G66750 1047 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Potri.007G026700 [exp] 329 / 9e-96 AT5G66750 993 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012798 [exp] 2096 / 0 AT2G28290 1549 / 0.0 SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) Lus10033980 [exp] 909 / 0 AT2G28290 720 / 0.0 SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) Lus10034064 [exp] 513 / 6e-155 AT3G06010 1422 / 0.0 Homeotic gene regulator (.1) Lus10010522 [exp] 508 / 2e-153 AT3G06010 1358 / 0.0 Homeotic gene regulator (.1) Lus10036371 [exp] 469 / 2e-132 AT2G46020 2621 / 0.0 CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) Lus10033967 [exp] 368 / 2e-102 AT5G18620 1650 / 0.0 chromatin remodeling factor17 (.1.2) Lus10041735 [exp] 339 / 1e-98 AT5G66750 1069 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10022423 [exp] 335 / 6e-92 AT2G13370 2250 / 0.0 chromatin remodeling 5 (.1) Lus10024019 [exp] 319 / 1e-91 AT5G66750 1034 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10009711 [exp] 331 / 4e-91 AT2G13370 2115 / 0.0 chromatin remodeling 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00271 [poplar] [flax] Helicase_C Helicase conserved C-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF04851 [poplar] [flax] ResIII Type III restriction enzyme, res subunit CL0023 [poplar] [flax] PF14619 [poplar] [flax] SnAC Snf2-ATP coupling, chromatin remodelling complex
Representative CDS sequence Show only first row Show all	>Potri.010G019150.14 pacid=42798158 polypeptide=Potri.010G019150.14.p locus=Potri.010G019150 ID=Potri.010G019150.14.v4.1 annot-version=v4.1 ATGGCGTCTTCACAATCTTCACAAAATGTGGAGTTGGAGGCTGCTAAGTTTCTACACAAACTCATTCAAGATTCTAAAGATGAGCCCGCGAAACTGGCTA CAAAACTCTATGTGATTTTGCAACACATGAAATCAAGCGGGAAGGAACATTCCATGCCGTATCAAGTAATATCAAGGGCCATGGAGACTGTCATCAATCA GCATGGTCTTGATATTGAAGCTTTGAGGTCATCACGCCTTCCTTTGACCGGTGGAACTCAAATGGGGGATTCTTCGACTGCACAATATGGAGGATCTTCA CAGGCAGTTGGAGTTGGGAAAGACTCTAAAGCTGGATTGGCTGAAAATGAGATATCCAAAGTTGATCCTTCTGCTTCCAGTAGGCCCCCTGCTGGCCCAA GTAGTGCAGGCCATGATTATTATCAAGGATCTGGAACTCAAAGGAGCAGCCAGTCATTTGATCATGAAAGTCCTTCTAGTTTGGAAACTAGGTCTGCCAA TTCACAATCCCAAGAAAGAGGAGCGAATCAGAAGGATGGTAAAAAGGCTGTTGCTAAGAGGAAGAGGGGTGATTCATCTTTACACTTGGAAATGCATGTT GAGAATCCCCAACAACTTGATCCTCGCAATACCATAGTTAATCCAAGGAAGGGGAAAATGAACAAGGTTGACTCACCAGGGAGTTATGCAGTTAGAGGTG GTGAAAATACCAGCTTTAATAAGGTTCCTAGTAGTGGTCAGCTGGAAGTTTCATCTTCTTATGTGTCTGCAGGACAACAGCAAGGGGGTTCTCTTTCATC TGCACATGAAAGTCTCACTTCCAGGTGTATGTGGAATCAAAATAAAGCAGGGTTACCCCTTGAAAGATCTCAAGTTCCAAGGTTCTCTTCGAATGCTGTT TCTGGTAATGCAACAGCAGAAATTCCATTGCAGCAGTCAGCAATTTCATCTCTTGGATCAAGTGCTTTTAGCAAGGTTCATGGAGGGATGCCTGCCACTT CATATCCAGCAGGGCCCATGGGGGAGCCAGGGTTTGCAGGTCTAGTGCAATATGGTGGTTCTGAACATCAGAAACATGGATTGGCAAAGGGTGCTGTAGC TAGTTCTGCTGAGAAAACCTCAGAAGGATTTTTTTCTGCTAACCGTGTGGATGACTTTCCCACTTCACTTTCAACTGGAAAGATTTTAGAAAATGATGGA GGAAGTTCAAACATGTTTGCAGAGTCAAATAAAATTATCCAGGGTGGCAGGCAATCTAGTAATTCAGAATTGACAATGATTAGATCAACACCTCCTAGAG ATGTTGGAAAATCTCCTGTTTCCCAGGGTTCTGTCTCTCCTGGCATGCCTTTCAATGAACAACAGCTGAGACAGCTCAGAGCTCAGTGCCTTGTCTTTTT AGCATTCAGAAATGTTTTGCCGCCAAAGAAACTTCATCTGGATATAGCACTTGGAAATGTTGTTCCTAAAGATGGTGGCACTTTGGATGGTCCTCGCAAA GAGCTGACTGATCATAAAGGAAAGGCACAATCTTCTAATGAGCCAACCAATATTCCTGAACTTTTAATGCCATGTGGAAGGCTGAATAATGCAAAGGAAT TTGATAAAGTGCTTCCCGGTTTGGGGGGAAGATTCTTGGATGAAAACTGTGCATCCAAAGAAGCTGATAAACTTAAAATGATGGAGGACAAAAGTGGTCT ACCTTCTGACCCCTCGATGCTTGCAGATGAAAGGAAATATCTGTACTCCACAAGGAAACTGGATGCTGAAATACAAAGGCAGGAAGCAGTGGAATCGCAG GCAGTTTTCACCACTGCAATGCAGCAGCCTGATTCAGCAAGGGGTGGTTTACCCTTGAGTAACCCTGTGGACAGCATGGGGAATGCCTTTCTTCAAGTTG GAAAAACTGACCATGCTTCTTCTGCAACATTCATAAATAAGCAGGCAATCCCTGAGGCAGTTAGCTGGACTAGAATTGGCAGTCAATCCCTACCATCCGG CTCCATTCAGCTCGGATTGGTTCCAGACAGAAAAGATAATGCTCCTAGTCAGTTTCACATTCTTGGCAATAGTAATGCTTCAGAACAAGATGATGATGAT AAGTCAGCCGCTTCTACTGATTCACCACCTTCTCCAAAGTACACCATGTTAGAGAAATGGATTATGGATCAGCAGAGGAAGAAACTTTTAACCGAGCAAG GTTGGGTTCTAAAACAGCAGAAAACAAAACAAAGAATTGCCACTTGTTTTGACAAGTTAAAGGAAACTGTTAGCTCGTCTGAAGACATATCTGCAAAAAC CAAAATTGTAATAGAATTGAAAAAGCTTCAGCTCTTGGAGCTTCAACGCCGTCTAAGGAGTAATTTTCTCAATGATTTTTTTAAGCCCATCACAAATGAC ATGGATCGTTTGAAATCATATAAGAAACATAAGCATGGCAGGAGGATCAAACAACTTGAAAGGTATGAGCAGAAAATGAAGGAAGAACGACAAAAGAGGA TACGTGAGAGGCAGAAGGAGTTCTTTGCTGAGATAGAAGTTCACAAGGAAAGACTGGAAGATGTGTTTAAGATTAAGAGAGAACGCTGGAAAGGTTTCAA TAAATATGTCAAAGAGTTCCATAAAAGGAAGGAGCGTACCCATCGGGAGAAGATTGACAGAATCCAGCGTGAGAAGATTAATTTATTGAAAATCAATGAT GTTGAGGGGTATCTGCGAATGGTGCAGGATGCAAAATCAGACCGTGTTAAGCAACTGCTGAAAGAGACGGAGAAGTATCTTCAAAAGCTGGGATCCAAGC TACAGGAAGCTAAGTCTATGGCAAGCCGATTTGAGAATGATATGGATGAGTCACGGCATGCTGCTGTTGTTGAGAAGAATGAAACTTCTGTTGAGAATGA AGATGAAAGTGACCAGGCCAAGCATTACATGGAAAGCAATGAGAAGTACTATTTGATGGCTCATAGTGTAAAAGAAAGCATTGCAGAACAGCCAACATGT CTCCTGGGCGGAAAATTAAGGGAGTATCAGATGAATGGACTAAGGTGGTTGGTTTCACTATACAACAATCATTTGAATGGCATTCTTGCTGATGAAATGG GTCTTGGGAAAACTGTTCAGGTTATTTCTCTAATTTGCTACCTGATGGAAACAAAAAATGATAGAGGGCCTTTCTTGGTGGTTGTACCTTCTTCAGTTTT ACCTGGCTGGGAGACTGAAATCAATTTCTGGGCACCTGGAATCCACAAAATTGTCTATTCTGGGCCTCCGGAGGAGAGGCGCAGGCTATTTAAGGAAAAG ATTGTGCATCAAAAATTCAATGTCCTTCTGACAACGTATGAATATCTGATGAACAAACACGATAGACCGAAACTGAGCAAGATACATTGGCGATATATAA TAATTGATGAAGGCCATCGCATAAAGAATGCTTCTTGCAAATTGAATGCTGACTTGAGGCATTATCAGAGTTCTCACAGGTTGTTATTAACTGGAACACC ACTACAGAACAATCTTGAGGAATTGTGGGCACTACTCAACTTTTTGCTACCTAACATATTTAACTCAGCAGAGGATTTTTCTCAGTGGTTCAACAAACCA TTTGAGAGTAATGGTGATAATTCAGCCGATGAAGCCTTACTTTCCGAGGAGGAAAATTTGTTGATCATAAACCGTCTCCACCAAGTTCTTCGACCATTTG TACTTCGGAGACTGAAACACAAGGTTGAGAATCAACTGCCTGAGAAGATTGAGAGACTTGTTCGGTGTGAGGCTTCTGCATATCAGAAGCTTCTTATGAA GAGAGTAGAAGAGAATCTTGGTTCAATTGGAAATTCAAAGGCTCGAACAGTGCACAACTCAGTTATGGAGCTTCGTAACATATGCAATCATCCATACCTT AGCCAGCTTCATGCGGATGAGGTTGATACTTTGATACCTAAGCATTTTCTGCCACCAATTATTAGACTTTGTGGAAAGCTTGAGATGCTAGATCGTTTGC TACCCAAATTGAAAGCAACAGACCATCGGGTTCTTTTCTTTTCCACAATGACCAGGCTGCTTGATGTTATGGAGGAGTATCTCACTTGGAAACAGTATCG ATACCTTCGCTTGGATGGTCATACCTCTGGAGGTGACCGTGGTTCACTCATTGACCGTTTTAACCAACAAGATTCTCCATATTTTATTTTCTTGCTCAGC ATTCGGGCTGGTGGTGTTGGAGTGAACCTTCAAGCTGCTGATACTGTGATCATATTTGATACTGATTGGAATCCTCAGGTTGATCTTCAAGCTCAAGCAA GGGCTCATAGGATTGGCCAGAAGAGGGATGTGCTTGTTCTTCGATTTGAAACAGTCCAAACTGTTGAAGAACAAGTCAGAGCTTCTGCTGAGCATAAACT GGGAGTTGCTAATCAGAGCATTACTGCTGGTTTCTTTGACAATAATACAAGTGCAGAAGATCGAAGGGAATACTTGGAGTCCCTTCTGCGTGAATGCAAG AAAGAGGAGGCTGCCCCTGTTTTAGATGATGATGCTCTAAATGATCTCTTAGCTCGCAGTGAATCAGAGATTGATGTATTTGAATCAGTTGACAAACAAA GGCGGCATCAAGAGATGGCAACATGGAAGAGTTTGTTATCGGGTCAAGGGATGGATGCTTTGGAACCTCTACCACCTTTGCCTTCACGCCTTGTAACAGA TGATGACTTGAAAGCACTCTATGAAGCAATGAAGTTGTATGATATGCCAAAGGCTGGGGCAGAATCCAATGCAGGGGCGAAGCGTAAGGGGCAGCATGTT GGGGGCCTTGATGCTAAACATTATGGAAGGGGCAAACGAGCTAGAGAGGTACGCTCTTATGAAGAGCAATGGACAGAAGAGGAATTTGAGAAGATGTGTC AGGCTGAATCTCCAGACTCTCCTAAGGTGAAAGAAGAAACAGGAGAGAGGAACTTGCCAAAAGAGGCTAGTGGGTCTTTATTGGCTATTGGTTGCACAGA ACCTCAAGCTCCACCACAACTGCCACCGCTGCCACCTCCTGTGGAGCCTCTCCTGCTGCAGCAGAGCAAAGAGGTAACTCCTCCATCAAAACGGGGGCGT GGAAGGCCGAGAAGAGCAACTTCAGATAAATCTCCAGCTGCGATGGTACTCTCAGTACCTCCTGAAACTGGCAAAGTGGATGTGGAGTTACAGAAGGGAA TAGAGTCTGGCTCCTCAAAAACATCTCCTCTTGATTCTTCTCCTGTTCCTAATTTAGAAGGTAATAGTGGAGCCACACCTCATTTAGGATCAAGGATTGC TCCCAGTGCTCAGCCAACCACTCCAGTTTCTGTTGCACTTAGCTCACAAATCACTACTGCTCCCCTTTCTGTGCCATTGCAATCAAGAGGTCGAGGACGG AAGGTTCAAGGTGCAGTTCAAACACCACGGCGCAGAGGAAAGAATCAAGTGGCTGTTTCACCCACCACTTCAAGTTCTGCTGTTCCTGATCCAAATATAA ATGATCAATCACAGAATGTATCTGTCAATCCATCAGTAATTGCCATGGGTGGAACTGTTTCTAGTGCTCCCATGCCACAACATCCTACTAATTTTCCTGC TGCTGCTGCTGCTGCTGTAGAGGGTATTAGTGCAGCCACTCATCATTCTGGGCCTGGGACTGCTTTGGATTCTCAACCAAACCCTCCCAACCCTTCTATC TCCCCTACCATTCAATCCATAGTTCCTAGTTCTTCAGTTCCTATGCAAGTCAAAGGGCAAAACCGAAAGACTCAAAGTGGCACTGAAACAACTCGACGCA AAGGAAAGAAAGAGGTGCCAGTATCACCTTCTGTTCCAGATGCTTCAGACAGTCAGCTTTCAAAATCCAATCCAACGTTGTCACAGGATAAATCTGGGGA ATCAGGAAGTAAAGCTATTTTCATGGTTAGTAACCAACAGAATGATGCTCTGGACAGAGATGTTAACCAGGAGCAAGTGTCCCAAGAAGTTGGCCAGGAT AAAAAAGCAACTGAGCTTTTGGATGATGTAGCCCAGCATAGGCAACCAGCCAGCACTCTTACAACGCATGATGGTATTACCAGATCTATGGCTTGTGCAG GATCTTCTGGACAAATACATGGTGTTGATATGCATGATGTAGCTTCTGTGACAAAGGAGGTTTCAGCAGTGAATAGCTCTTCAAAAGCTAAAGTACTTGA AGTTTCTGGGAGTGAAAGTGGAGTTATCCTGTCTACACCTCAATTAAGTAAGCGCTTTGCAGAGGTGGTCCAGAATCAAAGCTCAGAGGATAACCCTTCC CCAGTGGTTTATCCTGCAACTGAGTCATTACTCCATTCTGCCACTGTAGAAGGTGTTTGCAAAACTGTGCATCAGCTTGCTCCAAAGATTACTTCCAGCT CTCAGCCAATTTCATCTTATCCTTCTGTTACTCCAGTATTTCAATCTAACACTCCTGAAGCCATGCAAGTTAAAAGGCAAGGTCATAAAGCTCCTACCAG AGGGGAAGCACCTAGACGAAGAGGTAAGAAACAGGGTTCAATTTCACCTGCTGTGGATGCTACAATTGGTCAGGATCCCATTGTAAATCCTCAAATGCAA ATGCAAAATAAGTCCAGAGATTCATTAGGGAGCAAGGTCATATCCTTGAGGAGTGCTCAAGGAAATGAACTCAAGGAGTTGAAGAATGTTGTTCAGGAAG CACATATTCCCAGTGGTTTAGTTGGTCAAGATCCAAAAAGAAAAGAAGCTAGTGGGATTCTGGCTGTTGGCCGAATTCAGACTGCTGACGTAACTGATGT TGCTCGTGTGATGAAGGAGATTTTTTCTGAGACTTGCTCTTCAAAAAATAAAATTGGTGACTCTTCTACAGTTGAAGTTAGAAGTGCCCCTGTTTCAAGT AAGATGTCTGTGGAGGTGGCAAAAAACCAAAGCTCAGAGGGTAAAGCACTATCCGCTGTGTCAATTTTAGAAGCTACACTTCCAGTCATGGGGAGTTCAA ATGATGATTCTAAACAGCCTGGGTCTGGAGATGGTGTCAAGATGGAAGGGGATCATACTCCTGCTTTGGGTAAGGCTCCTACTTCTGAAATCAATCCCTC TATGCTTGAAATCAAGACCAGTCATGGCCCTGTTGAAAAAATGAGAGAGTTGATACGGGCTTCCACTGAAAACCCAGTCATGGGAAGTAATATGGAAGTC AATCATTCAGTTCTTGATGCTGGTGACAGGGACAATATTACTTCTCAGAGACCTGCTCCTGAAGGTCTTCTTGGTGATGGTGGTGATCCTCCCATGGTTA CCCTATCTGTTTCAGATGTAACAGAACACCCTAGGAGTGACTCTGGATACAGAACGCAGGCTTCAAAAGCATCTCCTAAGTTTTCTCCACATGTTAGCCT TGGCAATCGTACAATTTCCATTAAACCTGATTATACTGATTATTTTTCCTTAGGGACTGTTACTCCTGTTGCAGATCATTCAGATTCAAGAAATATCCTA AGTGTAGCTGATAGTGTATCTAGAAGCAGTAATAAGCCTTCTGTGAAAGAGTCCCTAGATTCTTCTCTTGAAATCAGAGATGATGAAGCTAAAACTCATA TTCAATCGGGGGTTGATATAACCAAGGTTGAGGGTGAGGAGGTCTGCAAAATGCAAATTGATCCTGCTGTATCAGAGGCCTCTTCTCTTAAATATCTGTC TTCTTCCAACAAGATAGAGCCAAACAGTTCTGCAGCTGGAGCCAGTCATCGAAAGGATGCTTTTTCTCAGTTTGGTGGGATTGTGCTGCAAAATATTTCT CCACTCAGAGGAAATACCTATGGCCCATGTGAGAATGATCTTGTTGGAAGCTCAGTAGCAGTGGAGGAACCACACAAAACTGAAGCAGGTAACAAAGCAG AATATTCTCAGGTTGGTGCGTTTGTGCCAAAAGATTTGTCAGAAAACATGGTTCTACCCTCGTCCCCACTGGCAAGGGAGGAAGAAAAGGACAGTAGACC ATTTGAGCAGGGTTTAGCTGGCAGCTCAATAGAACCAGAAACATCAAAGGGGTTTGAGGCTCAAATGGCCAGTAAAATGGATGTATCTAATGCTAATGTT ATCATTCCAGAAATTAGACCAGAACACATGGTTCTACCCCAATCTTTCTTGGAAGCAGAAGAAAACATCAATGGCATTTTGGAGAATGATGCGGCTTGCT GTTTGGTGGTGCCAGAGGGAGCAAAGGGATCTGAAGTTGAAAATGATGATCAGATGGGCGCGCAGAAGGTGTCTGATAGTGTACAAGAAATTGTGGATCC CTTACCATCTTCTCTTGTAATAGAGGAAGATCAGGTTGAGGGCTCATCCGAGAAGGGTGCGCTTTGTTTCTCTGTAATAGTTCAAAATTCAGGAGGGTCA GAAGCTGAAGCAGGCAAGCAACTAGATGCATCTCATGCTGAGACTTTGGTACGAGAAAATGTATCAGAGAACATGGTTTCGCCAAGATCTTCTTTGGTAT CAGAGGCACCAGTGGTTGAGGGCTCTTCTGAGCAGGATATATTTGGCTTCTCAGTAGTACTAGAGACATCTAAAGGGTCTGCTACTAATAATGAGGTTCA AGTAAATCCATCTCAGGTAGATGGAGTTGTGCCTGAAACTAAAACGGGCATATGGATGCAGGAATCTGAGATTGCAAGATCATCTGAGAAGCACCAAGAT GACAGCTCAGTAGCCAAGCAATCAAAACCATCTGCAATTGAAGAGGGCAGTCAAATGATAGTATCTGAGGTTGGTGGAATTGTGCATGAAACTTCTTTGG AAAACAGTTGTGTGCCATCTGTCTCAGAAACAAAGGCAGAAAACGCTAATTGCTTATATGAGAAAAGTTCTCATTGCGTCTTGCTTGCTCTAGAGGAAGC AAAACAGTCTGAAACTGAAAGTAGCAACCAACTGGCTGTATCTGATTTTCCTATGACCGGGCCTGAAAATTCTTTGGAGAACATATGCCAGTCTTCATGT TCTCTAACAATGGAGGCGGATAAGATTGAGGGCTCGTCTAAGAAGAGTTCTTGTGACATCTCAGTAGCAATGGAGGAATCAAAAAAGTTTGAAAAAGAAA ACGATGAATCTCATGTTGGTAGCAAGGAATGTGAAGAAAGTCAAGTTGTTGGTACCAGTTTCGAACACACACAGGTTGGTAGCATTGGACCAGAAGAAAC ATCTGGAAACACAGACAAATCCTCATATTCCTCAGAAATGCAGGAAGGTAAGATTGAGGGCTCATCTCAGAATATCCCAGAGGAATCAAATAGGTCGGAA GCTGAAACAGATGATCAAACTCAGTATGGTGGGATGGCTCTAGCCAACATGTCAGAAAATATCGAGGGCTCTTATTCCTCAGGGATGCAGGAAGACAAGA TTAAGGGCTCTTCTTTGAATGTACCAGAGGAATCAAATAGGTTGGAAGCTGAAACAGATGATCAAACTCAATTTGGTGGGATGACTCTAGCTAAGATGTC AGAAAAGATTGAGGGCTCATCTCTGAATGTCCCAGAGGAATCAAATAGGTCGGAAGCTGAAATAGATGACCAAGCTCAATGTGGTGGGATGGCTCTAGCG AACATGCCAGAAAAGATAGAGAGCATATCTTTCTCAGGGATGCAGGAAGACAAGATTGAGGGCTCTTCTCTGAATGTCCCAGAGTCAAATAGGTTGGAAG CTGAAACAGATGATCGAACTCAATTTGGTGGGATGGCTCTAGCTAAGATGTCAGAAAAGATTGAGGGCTCATCTCTGAATGTCCCAGAGGAATCAAATAG GTCGGAAGCTGAAATAGATGACCAAGCTCAATGTGGTGGGATGGCTGTAGCGAACATGCCAGAAAAGATAGAGGGCTTATCTTCCTCAGGGATGCAGGAA GACAAGATTGAGGGCTCTTCTCTGAATTTTCCAGAGTCAAATAGGTTGGAAGCTGAAACAGATGATCAAACTCAATTTTGTGGGATGGCTCTAGCTAAGA TGTCAGAAAAGATTGAGGGCTCATGTCTAAATGTCTCAGAGGAATCTAAGAGGTCGGAAGCTGAAACAAATGACCAAGCTCAATGTGGTGGGATGGCTCA AGCTAACATGCCAGAAAAGATAGAGGACGTATCTTTCTCAGGGATGCAGGAAGACAAGATTGAGGGCTCATCTCAGAATGTCCCAGAGTCAAATAGGTCA GAAGCTGAAACAGATAATCAAACTCAATTTGGTGGGATGGCTCTAGCTAAGATGTTAGAAAAGATTGAGGGCTCATCTCTGAATGTCCAAGAGGAATCAA ATAGGTCGGAAGCTGAAACAAATGACCAAGCTCAATGTGGTGGGATGGCTCTAGCGAACATGCCAGAAAAGATAGAGGACTTGTCTTCCTCAGGGATGCA GGAAGACAAGATTAAAGGCTCTTCTCTAAATGTCCCAGAGGAATCAAAAAGGCAGGAAGCTGAAACTGTAACTGATGATGAAACTCAGTGTGATGGGATG GCTCCAGCGAACATGTTGCCTTCATCTTCTCTCTTGGAGGAAAAGACTGACGTCTTATCAGAGAAAGATCCAGCTGAATAA
AA sequence Show only first row Show all	>Potri.010G019150.14 pacid=42798158 polypeptide=Potri.010G019150.14.p locus=Potri.010G019150 ID=Potri.010G019150.14.v4.1 annot-version=v4.1 MASSQSSQNVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQHGLDIEALRSSRLPLTGGTQMGDSSTAQYGGSS QAVGVGKDSKAGLAENEISKVDPSASSRPPAGPSSAGHDYYQGSGTQRSSQSFDHESPSSLETRSANSQSQERGANQKDGKKAVAKRKRGDSSLHLEMHV ENPQQLDPRNTIVNPRKGKMNKVDSPGSYAVRGGENTSFNKVPSSGQLEVSSSYVSAGQQQGGSLSSAHESLTSRCMWNQNKAGLPLERSQVPRFSSNAV SGNATAEIPLQQSAISSLGSSAFSKVHGGMPATSYPAGPMGEPGFAGLVQYGGSEHQKHGLAKGAVASSAEKTSEGFFSANRVDDFPTSLSTGKILENDG GSSNMFAESNKIIQGGRQSSNSELTMIRSTPPRDVGKSPVSQGSVSPGMPFNEQQLRQLRAQCLVFLAFRNVLPPKKLHLDIALGNVVPKDGGTLDGPRK ELTDHKGKAQSSNEPTNIPELLMPCGRLNNAKEFDKVLPGLGGRFLDENCASKEADKLKMMEDKSGLPSDPSMLADERKYLYSTRKLDAEIQRQEAVESQ AVFTTAMQQPDSARGGLPLSNPVDSMGNAFLQVGKTDHASSATFINKQAIPEAVSWTRIGSQSLPSGSIQLGLVPDRKDNAPSQFHILGNSNASEQDDDD KSAASTDSPPSPKYTMLEKWIMDQQRKKLLTEQGWVLKQQKTKQRIATCFDKLKETVSSSEDISAKTKIVIELKKLQLLELQRRLRSNFLNDFFKPITND MDRLKSYKKHKHGRRIKQLERYEQKMKEERQKRIRERQKEFFAEIEVHKERLEDVFKIKRERWKGFNKYVKEFHKRKERTHREKIDRIQREKINLLKIND VEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMASRFENDMDESRHAAVVEKNETSVENEDESDQAKHYMESNEKYYLMAHSVKESIAEQPTC LLGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWETEINFWAPGIHKIVYSGPPEERRRLFKEK IVHQKFNVLLTTYEYLMNKHDRPKLSKIHWRYIIIDEGHRIKNASCKLNADLRHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSAEDFSQWFNKP FESNGDNSADEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENQLPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKARTVHNSVMELRNICNHPYL SQLHADEVDTLIPKHFLPPIIRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLTWKQYRYLRLDGHTSGGDRGSLIDRFNQQDSPYFIFLLS IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECK KEEAAPVLDDDALNDLLARSESEIDVFESVDKQRRHQEMATWKSLLSGQGMDALEPLPPLPSRLVTDDDLKALYEAMKLYDMPKAGAESNAGAKRKGQHV GGLDAKHYGRGKRAREVRSYEEQWTEEEFEKMCQAESPDSPKVKEETGERNLPKEASGSLLAIGCTEPQAPPQLPPLPPPVEPLLLQQSKEVTPPSKRGR GRPRRATSDKSPAAMVLSVPPETGKVDVELQKGIESGSSKTSPLDSSPVPNLEGNSGATPHLGSRIAPSAQPTTPVSVALSSQITTAPLSVPLQSRGRGR KVQGAVQTPRRRGKNQVAVSPTTSSSAVPDPNINDQSQNVSVNPSVIAMGGTVSSAPMPQHPTNFPAAAAAAVEGISAATHHSGPGTALDSQPNPPNPSI SPTIQSIVPSSSVPMQVKGQNRKTQSGTETTRRKGKKEVPVSPSVPDASDSQLSKSNPTLSQDKSGESGSKAIFMVSNQQNDALDRDVNQEQVSQEVGQD KKATELLDDVAQHRQPASTLTTHDGITRSMACAGSSGQIHGVDMHDVASVTKEVSAVNSSSKAKVLEVSGSESGVILSTPQLSKRFAEVVQNQSSEDNPS PVVYPATESLLHSATVEGVCKTVHQLAPKITSSSQPISSYPSVTPVFQSNTPEAMQVKRQGHKAPTRGEAPRRRGKKQGSISPAVDATIGQDPIVNPQMQ MQNKSRDSLGSKVISLRSAQGNELKELKNVVQEAHIPSGLVGQDPKRKEASGILAVGRIQTADVTDVARVMKEIFSETCSSKNKIGDSSTVEVRSAPVSS KMSVEVAKNQSSEGKALSAVSILEATLPVMGSSNDDSKQPGSGDGVKMEGDHTPALGKAPTSEINPSMLEIKTSHGPVEKMRELIRASTENPVMGSNMEV NHSVLDAGDRDNITSQRPAPEGLLGDGGDPPMVTLSVSDVTEHPRSDSGYRTQASKASPKFSPHVSLGNRTISIKPDYTDYFSLGTVTPVADHSDSRNIL SVADSVSRSSNKPSVKESLDSSLEIRDDEAKTHIQSGVDITKVEGEEVCKMQIDPAVSEASSLKYLSSSNKIEPNSSAAGASHRKDAFSQFGGIVLQNIS PLRGNTYGPCENDLVGSSVAVEEPHKTEAGNKAEYSQVGAFVPKDLSENMVLPSSPLAREEEKDSRPFEQGLAGSSIEPETSKGFEAQMASKMDVSNANV IIPEIRPEHMVLPQSFLEAEENINGILENDAACCLVVPEGAKGSEVENDDQMGAQKVSDSVQEIVDPLPSSLVIEEDQVEGSSEKGALCFSVIVQNSGGS EAEAGKQLDASHAETLVRENVSENMVSPRSSLVSEAPVVEGSSEQDIFGFSVVLETSKGSATNNEVQVNPSQVDGVVPETKTGIWMQESEIARSSEKHQD DSSVAKQSKPSAIEEGSQMIVSEVGGIVHETSLENSCVPSVSETKAENANCLYEKSSHCVLLALEEAKQSETESSNQLAVSDFPMTGPENSLENICQSSC SLTMEADKIEGSSKKSSCDISVAMEESKKFEKENDESHVGSKECEESQVVGTSFEHTQVGSIGPEETSGNTDKSSYSSEMQEGKIEGSSQNIPEESNRSE AETDDQTQYGGMALANMSENIEGSYSSGMQEDKIKGSSLNVPEESNRLEAETDDQTQFGGMTLAKMSEKIEGSSLNVPEESNRSEAEIDDQAQCGGMALA NMPEKIESISFSGMQEDKIEGSSLNVPESNRLEAETDDRTQFGGMALAKMSEKIEGSSLNVPEESNRSEAEIDDQAQCGGMAVANMPEKIEGLSSSGMQE DKIEGSSLNFPESNRLEAETDDQTQFCGMALAKMSEKIEGSCLNVSEESKRSEAETNDQAQCGGMAQANMPEKIEDVSFSGMQEDKIEGSSQNVPESNRS EAETDNQTQFGGMALAKMLEKIEGSSLNVQEESNRSEAETNDQAQCGGMALANMPEKIEDLSSSGMQEDKIKGSSLNVPEESKRQEAETVTDDETQCDGM APANMLPSSSLLEEKTDVLSEKDPAE

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Potri.010G019150 [exp]	0	1
					Potri.007G113400 [exp]	2.44	0.8645
AT3G17450			hAT dimerisation domain-contai...		Potri.002G188400 [exp]	2.44	0.8651
AT5G06600		AtUBP12, UBP12	ubiquitin-specific protease 12...		Potri.016G064100 [exp]	3.16	0.8389	Pt-UBP12.1
AT5G24740			Protein of unknown function (D...		Potri.001G455600 [exp]	3.46	0.8615
AT3G04160			unknown protein		Potri.019G029400 [exp]	4.47	0.8610
AT3G50430			unknown protein		Potri.005G133500 [exp]	4.89	0.8525
AT2G19390			unknown protein		Potri.018G056400 [exp]	5.83	0.8256
AT5G42400		SDG25, ATXR7	ARABIDOPSIS TRITHORAX-RELATED7...		Potri.002G001000 [exp]	5.91	0.8471
AT1G61690			phosphoinositide binding (.1)		Potri.004G030500 [exp]	6.32	0.7858
AT5G44180	HD		Homeodomain-like transcription...		Potri.007G135500 [exp]	6.70	0.8320

Compare expression of checked genes

Potri.010G019150 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.