Plant FIBer expression Database

Potri.010G044900 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G70570 903 / 0 anthranilate phosphoribosyltransferase, putative (.1.2)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10006201
[exp]
950 / 0 AT1G70570 884 / 0.0 anthranilate phosphoribosyltransferase, putative (.1.2)
Lus10036848
[exp]
930 / 0 AT1G70570 869 / 0.0 anthranilate phosphoribosyltransferase, putative (.1.2)
PFAM info
Representative CDS sequence
>Potri.010G044900.2 pacid=42798854 polypeptide=Potri.010G044900.2.p locus=Potri.010G044900 ID=Potri.010G044900.2.v4.1 annot-version=v4.1
ATGAAATCTCTACTGAGTCCACAACCTTCTCTCCCAACTCACATCACCGAACCTCGAACCAATCTCTCCCGTTCAAAAGTCACTTCCTCTCTAAGATTCG
ATCGTGACCGTTGGATTGGACGGAAGAAGTGTGGTTTGACTTTGAGCGCTGTGCTGGACCCTGCAACAATTGATCAATTTGGGATTTCAGAATCCGAATT
CGTAAATCCAGCTGTTTCCACTTCCTATCGGAGCTCCAAGTTGCCGAAACCCAACCAGACGGTCCTTGATGCTCAAGCTAGGGTTTGCACTGGTCCCACC
CAGACCAAGCCTCTCAACGAGGACCAGGCTTTTAAAGTTTTCGATACCATTTTAAGATCCGCTAGAGGGGAATTAAAAGATGAAGAGCAAGTTTCGAAAG
CGCAACTTGGGGCATTTTTTGCTGCGATGACAATTCGTGCGAATGCCTTTCCAGAAGCAACCCAATGGAGTGAAGGTGAGAAGCATGCAGTGAGCAATTT
TTGGCCCCACCTAGTTCGAGCGCTACCATCGGATGTAATCTTCATTGCCGATCCTGAAGGCTCAATAATGGGAGCTGGAAGTTCGATTGGGCCCCAATAT
GTTGGGAATGGTACGAGCGATATGAGATTGGTTGGAGCCCTTAGGGAGGTTTTGGCAGGTGGTCACCTTGGATATGAGGAAGTCCAAGGTGTTCTAAGAG
ATGTTCTTCCTTTTACATTTGAAGATAACAAGTGTTCCTCTGGAGTTAGTGAGACGTTGCTTTCGGCTTTTTTGATTGGCCAGCGTATGAACAGGGAAAC
CGATCGTGAGTTGAAGGCGTATTGCCTTGCATTTGATGATCAACTTGGTCTCGCACCAGTTGCTGATGTTAGATCATTGACTCATTACGGTGAACCTTAT
GATGGAAACACTCGTTTCTTTAGGAGCACATTGTTTGTTGCTGCTGTTAGATCCTGTTATGGCGAATCTTCCTTGCTTCATGGTGTGGAGTGGATGCCAC
CTAAGGGAGGCATAACAGAAGAACAGATGCTGAAGTTTATGGGAGCAAATACAAGATTGACTCCTTTGCAGGCTAAAGAGCTTCTTGAGGATGAGGAGCT
TGGTTTTGCCTACATAAGTCAGCGTGAAGCTTGCCCATCCCTATATTCATTGATTGGGCTGAGGGAGCACATAAAGAAACGTCCCCCTCTGGCAACAACT
GAAAAGGTTCAACAATTTGTGAAGGCTCGGGGGAGAGAAGCAATTGTTACTGGGTTTTATCATGAAGGCTATGAGGAGCCTCTTTTAATGCTTATGAAAA
GAAGAGGTGTTCATTCTGGTTTGGTGGTGAAGGGCGAGGAAGGGGCCCTCTCAATGACAACAAAATTCCGATCTGCGAATGCATCAAAAGGACTTCCTGT
GAACTACTGTTCAGGCTTTCGTTCATTGGGCATGGATTCTGCTTTTGAACTTGATGGGGTGTCACGTCAGAATTTCAAAACTGAAGTTAATGCCAAGGAC
TTCGGTTTTGAACCCACTGATACTCCAAGAACTGATAGATCTGTCTCCAAGAATATAGAGTTGGGTTTAGGAGCTCTCCATGGCCAGAAAGGACCAGCAT
ATGATCGAATTGTCTTAAATGCTGGAATGGTGGATCACCTGCTAGGATGTGATGGTGCAGAAGATGTATCTACAGCACTGGATAGAGCCAGGGAGGCCAT
TGATAGTGGTAAAGCTCTTAAAAAGCTGTTAAATTACATAAAGGTCTCGCAGAAAATGAGGTGA
AA sequence
>Potri.010G044900.2 pacid=42798854 polypeptide=Potri.010G044900.2.p locus=Potri.010G044900 ID=Potri.010G044900.2.v4.1 annot-version=v4.1
MKSLLSPQPSLPTHITEPRTNLSRSKVTSSLRFDRDRWIGRKKCGLTLSAVLDPATIDQFGISESEFVNPAVSTSYRSSKLPKPNQTVLDAQARVCTGPT
QTKPLNEDQAFKVFDTILRSARGELKDEEQVSKAQLGAFFAAMTIRANAFPEATQWSEGEKHAVSNFWPHLVRALPSDVIFIADPEGSIMGAGSSIGPQY
VGNGTSDMRLVGALREVLAGGHLGYEEVQGVLRDVLPFTFEDNKCSSGVSETLLSAFLIGQRMNRETDRELKAYCLAFDDQLGLAPVADVRSLTHYGEPY
DGNTRFFRSTLFVAAVRSCYGESSLLHGVEWMPPKGGITEEQMLKFMGANTRLTPLQAKELLEDEELGFAYISQREACPSLYSLIGLREHIKKRPPLATT
EKVQQFVKARGREAIVTGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTKFRSANASKGLPVNYCSGFRSLGMDSAFELDGVSRQNFKTEVNAKD
FGFEPTDTPRTDRSVSKNIELGLGALHGQKGPAYDRIVLNAGMVDHLLGCDGAEDVSTALDRAREAIDSGKALKKLLNYIKVSQKMR

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT1G70570 anthranilate phosphoribosyltra... Potri.010G044900
[exp]
0 1
AT1G17210 ATILP1 ARABIDOPSIS IAP-LIKE PROTEIN, ... Potri.011G081200
[exp]
3.00 0.8367
AT1G01220 AtFKGP Arabidopsis thaliana L-fucokin... Potri.014G101400
[exp]
3.16 0.8117
AT1G73970 unknown protein Potri.008G016000
[exp]
7.14 0.8269
AT4G37210 Tetratricopeptide repeat (TPR)... Potri.005G130800
[exp]
9.79 0.8334
AT3G49050 alpha/beta-Hydrolases superfam... Potri.012G142700
[exp]
10.72 0.7732
AT2G37650 GRAS SCL9 GRAS family transcription fact... Potri.008G057400
[exp]
11.31 0.8233
AT5G17990 PAT1, TRP1 PHOSPHORIBOSYLANTHRANILATE TRA... Potri.015G078801
[exp]
13.26 0.7869
AT2G35060 KUP11 K+ uptake permease 11, K+ upta... Potri.001G123800
[exp]
16.43 0.7715 KUP10.3
AT4G13730 Ypt/Rab-GAP domain of gyp1p su... Potri.006G069300
[exp]
18.33 0.7969
AT5G48440 FAD-dependent oxidoreductase f... Potri.014G177300
[exp]
18.76 0.7697

Potri.010G044900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.