Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP86.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24540 684 / 0 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) AT1G13140 654 / 0 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT3G26125 635 / 0 CYP86C2 "cytochrome P450, family 86, subfamily C, polypeptide 2", cytochrome P450, family 86, subfamily C, polypeptide 2 (.1) AT1G13150 632 / 0 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1) AT5G23190 533 / 0 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 504 / 1e-175 Cytochrome P450 superfamily protein (.1) AT1G63710 405 / 2e-136 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT4G00360 405 / 4e-136 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT1G01600 402 / 7e-135 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT2G45970 393 / 2e-131 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G183300 [exp] 1009 / 0 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.007G072100 [exp] 510 / 5e-177 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 510 / 7e-177 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.009G043700 [exp] 396 / 4e-133 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.003G129100 [exp] 397 / 8e-133 AT1G63710 823 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Potri.007G080300 [exp] 392 / 3e-131 AT4G39490 574 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.015G132800 [exp] 390 / 9e-131 AT4G39490 589 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.001G249700 [exp] 386 / 3e-129 AT5G58860 790 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.001G397900 [exp] 385 / 1e-128 AT4G39490 480 / 6e-166 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006232 [exp] 599 / 0 AT1G24540 524 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Lus10017394 [exp] 507 / 2e-175 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10010193 [exp] 501 / 1e-173 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 488 / 2e-168 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10018217 [exp] 384 / 4e-128 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10040687 [exp] 382 / 1e-127 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 384 / 3e-127 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10002527 [exp] 375 / 9e-125 AT2G23180 454 / 7e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10003669 [exp] 369 / 3e-122 AT2G23180 440 / 4e-150 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10022279 [exp] 353 / 2e-116 AT2G23180 449 / 4e-154 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.010G050100.1 pacid=42799466 polypeptide=Potri.010G050100.1.p locus=Potri.010G050100 ID=Potri.010G050100.1.v4.1 annot-version=v4.1 ATGGAAAGAGAACCAACAACGGCAACAAATTTCTTGTTCTCTGCAACGCAATGGATGTACATTCACTCATCCCTTTGGGATGTATCTCTTGCTTTGTTGG GACTCTTTGTTTTCCGATGTATCAATGAAAGGCTCACCAACAAAGGCCCTATGCTATGGCCTGTGTTGGGGATCTTACCCACCATGTTCCTCCACATCAA CGACATGTACAATTTCGTCACGAGAGCTTTAAGCAGAGCAGGGGGGACTTTCCACCATAAAGGAATGTGGATGGGAGGGGCATATGGAATCGCCACGGCT GATCCTTCCAATGTCGCGTATATGCTTAAAACGAATTTCAAGAACTTCCCAAAAGGGAAATACTTCAGAGACAGGTTTCGGGATTTGCTAGGAGATGGTA TTTTCAATGCTGACGATGAATTGTGGAGGGAACAAAGGCAAGTTGTGAAAGCAGAGATGCATTCAAGCAGGTTCATTGAGCACTCGCTTCAAACCATGCA AGATCTGTTGCACCAGAAGCTGTTGAAGCTGACAGAAAAACTGGTAAAGTCAGGAGATAGTTTTGATCTCCAAGAAGTGCTTCTTCGGTTTACGTTTGAT AACATTTGTACTGCAGCTTTTGGCGTTGATCCTGGGTGCTTAGCCCTGGATTTCCCTGAAGTTCCCTTCGCAAAAGCTTTCGAAAAAGCAACAGAATTAA CTTTGTTCAGGTTCCTGATTCCGCCTTTCATTTGGAAGCCCATGAAGTTCTTTGGAATAGGATACGAGAAGGCACTGAAGGAGGCAGTTGGGATTGTGCA TGACTTTGCTGAGAAGACAGTGAAGGGTAGAAGGGATGAGGCAAGGAAGCATGGTAGCTTGTGTCATCAATCTGATCTCTTGTCCAGGCTAATTGAGATT GAAAATACTGGACAAGGAAAGAAGCTGCAATTCCCAGATAAGTATTTCAGAGATTTGTGTGTAAATTTCATCCTAGCAGGGAGAGACACGACTTCGGTGG CATTGGCATGGTTTTTCTGGTTAGTACACAGCAATCCAGAAGTGGAAAACAGAATTCTACGTGAGATTAATGACATTTTGTCCCTTCGTGAGACACAGAC AAAAAATGAGATCATTTTTACTATGGAAGAATTGAACAAGATGGTGTATCTCCATGCAGCATTATCCGAATCCCTGAGGCTGTATCCATCCGTACCAATT GAAATGAAAGAAGTGGCAGAAGACGATGTTCTCCCTGACGGTTCCATAGTTAAGAAGGGCGCTCGAGTTTTCTACTGCATATTCTCAATGGGCAGGATGG ATTCTATATGGGGGCAAAATTGCTTGGAGTTCAAACCAGAGAGGTGGATTAGGGATGGAAAGTTCGTAAGTGAAAATCAGTTCAACTATGCAGTGTTCAA CGCCGGTCCAAGGTTGTGTCTGGGGAAGAAGTTTGCATACATGCAGATGAAAATGGTGGCAGCTTCAATCCTGTTGAGGTACTCAGTTAAGGTCATTGAA GGCCATGATGCTTCTCCGAAGATGACAACCACACTTTACATGAAGAATGGACTCCTGGTGACTCTGATGCCTAGGTTGGTGAACGTTTAA
AA sequence Show only first row Show all	>Potri.010G050100.1 pacid=42799466 polypeptide=Potri.010G050100.1.p locus=Potri.010G050100 ID=Potri.010G050100.1.v4.1 annot-version=v4.1 MEREPTTATNFLFSATQWMYIHSSLWDVSLALLGLFVFRCINERLTNKGPMLWPVLGILPTMFLHINDMYNFVTRALSRAGGTFHHKGMWMGGAYGIATA DPSNVAYMLKTNFKNFPKGKYFRDRFRDLLGDGIFNADDELWREQRQVVKAEMHSSRFIEHSLQTMQDLLHQKLLKLTEKLVKSGDSFDLQEVLLRFTFD NICTAAFGVDPGCLALDFPEVPFAKAFEKATELTLFRFLIPPFIWKPMKFFGIGYEKALKEAVGIVHDFAEKTVKGRRDEARKHGSLCHQSDLLSRLIEI ENTGQGKKLQFPDKYFRDLCVNFILAGRDTTSVALAWFFWLVHSNPEVENRILREINDILSLRETQTKNEIIFTMEELNKMVYLHAALSESLRLYPSVPI EMKEVAEDDVLPDGSIVKKGARVFYCIFSMGRMDSIWGQNCLEFKPERWIRDGKFVSENQFNYAVFNAGPRLCLGKKFAYMQMKMVAASILLRYSVKVIE GHDASPKMTTTLYMKNGLLVTLMPRLVNV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G24540		CYP86C1	"cytochrome P450, family 86, s...		Potri.010G050100 [exp]	0	1	CYP86.1
AT3G54340	MADS	AP3, ATAP3	APETALA 3, K-box region and MA...		Potri.002G028400 [exp]	6.00	0.9610	Pt-APETALA3.1
AT5G19600		SULTR3;5	sulfate transporter 3;5 (.1)		Potri.006G156038 [exp]	9.69	0.9510
AT5G19600		SULTR3;5	sulfate transporter 3;5 (.1)		Potri.006G158900 [exp]	12.72	0.9483
AT1G32780			GroES-like zinc-binding dehydr...		Potri.011G152800 [exp]	20.00	0.9318
					Potri.002G227701 [exp]	26.45	0.9435
AT3G21090		ABCG15	ATP-binding cassette G15, ABC-...		Potri.016G056600 [exp]	26.68	0.9450
AT3G16500	AUX_IAA	IAA26, PAP1	indole-3-acetic acid inducible...		Potri.018G057000 [exp]	27.45	0.9201
AT1G78940			Protein kinase protein with ad...		Potri.014G001700 [exp]	33.04	0.9386
AT1G78850			D-mannose binding lectin prote...		Potri.011G110000 [exp]	34.85	0.9415
AT3G25140		QUA1, GAUT8	QUASIMODO 1, GALACTURONOSYLTRA...		Potri.008G010000 [exp]	45.16	0.8930

Compare expression of checked genes

Potri.010G050100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.