Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ATBET12.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G14450 56 / 3e-11 ATBET12 unknown protein AT1G04330 54 / 1e-10 unknown protein AT3G23170 51 / 1e-09 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G164801 [exp] 114 / 4e-34 AT4G14450 57 / 1e-11 unknown protein
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021208 [exp] 87 / 3e-23 AT4G14450 80 / 2e-20 unknown protein Lus10041157 [exp] 83 / 6e-22 AT4G14450 72 / 3e-17 unknown protein Lus10021878 [exp] 82 / 2e-21 AT4G14450 71 / 6e-17 unknown protein Lus10022200 [exp] 80 / 1e-20 AT4G14450 78 / 1e-19 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.010G073900.1 pacid=42798432 polypeptide=Potri.010G073900.1.p locus=Potri.010G073900 ID=Potri.010G073900.1.v4.1 annot-version=v4.1 ATGGCAAATACACTTCGAAATAGCAACTCCGCCGCAGCTCGGTCGCAGCCCAGCCGGCTCCAGCGGCGGAGACCAGCGTCCTTGCAGATCAGTCCAGCTT CTTCTTCTTCTTCCTGTTGGAAAGTTGCGATTCCTCTCTTGTCTCCGCTTATTACTTCGCCTACCGCGATGGACATGAAGTCTCGGGAGGATCCGCAACC ACCGCCGAGGAGTCAGGGAACGGAGGGGGAGAAGCCAGTGGTGTTCACGAAGTGGCAGCACCCGGCGGCTCCTTTATGTTACGAGCCGGCTAAGTTTAAG CCCTCATTTTCTGTGCCTGTATAG
AA sequence Show only first row Show all	>Potri.010G073900.1 pacid=42798432 polypeptide=Potri.010G073900.1.p locus=Potri.010G073900 ID=Potri.010G073900.1.v4.1 annot-version=v4.1 MANTLRNSNSAAARSQPSRLQRRRPASLQISPASSSSSCWKVAIPLLSPLITSPTAMDMKSREDPQPPPRSQGTEGEKPVVFTKWQHPAAPLCYEPAKFK PSFSVPV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G14450		ATBET12	unknown protein		Potri.010G073900 [exp]	0	1	Pt-ATBET12.2
AT2G17270		PHT3;3	phosphate transporter 3;3 (.1)		Potri.004G207200 [exp]	4.00	0.9278
AT3G54140		ATPTR1	ARABIDOPSIS THALIANA PEPTIDE T...		Potri.009G042400 [exp]	4.00	0.9196
AT5G01540		LECRKA4.1	lectin receptor kinase a4.1 (....		Potri.016G123501 [exp]	4.89	0.9268
AT2G27110	FAR1_related	FRS3	FAR1-related sequence 3 (.1.2....		Potri.013G068900 [exp]	7.61	0.8830
AT5G64230			unknown protein		Potri.017G053200 [exp]	8.12	0.9141
AT3G28970		AAR3	antiauxin-resistant 3, Domain ...		Potri.017G084300 [exp]	10.58	0.8833
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Potri.017G032766 [exp]	12.48	0.9210
AT1G05010		ACO4, EAT1, EFE	ethylene forming enzyme, ethyl...		Potri.014G159000 [exp]	12.96	0.9119	Pt-ACO1.4
AT1G22750			unknown protein		Potri.002G062600 [exp]	16.52	0.8922
AT4G27810			unknown protein		Potri.015G011900 [exp]	16.97	0.8787

Compare expression of checked genes

Potri.010G073900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.