Potri.010G083300 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT3G22790 1306 / 0 Kinase interacting (KIP1-like) family protein (.1)
AT4G14760 1173 / 0 kinase interacting (KIP1-like) family protein (.1)
AT1G03080 963 / 0 kinase interacting (KIP1-like) family protein (.1)
AT4G02710 435 / 2e-129 Kinase interacting (KIP1-like) family protein (.1)
AT2G22560 157 / 2e-38 Kinase interacting (KIP1-like) family protein (.1)
AT5G10500 154 / 2e-37 Kinase interacting (KIP1-like) family protein (.1)
AT1G09720 150 / 2e-36 Kinase interacting (KIP1-like) family protein (.1)
AT2G30500 144 / 7e-36 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
AT5G58320 134 / 2e-32 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3)
AT2G47920 109 / 2e-26 Kinase interacting (KIP1-like) family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.008G156200 1881 / 0 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.005G213400 1194 / 0 AT1G03080 1399 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Potri.002G049600 1189 / 0 AT1G03080 1229 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Potri.008G156250 812 / 0 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1)
Potri.005G147300 162 / 4e-40 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1)
Potri.007G011300 161 / 1e-39 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.013G158100 152 / 9e-38 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Potri.019G131000 151 / 1e-37 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Potri.002G106400 152 / 4e-37 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10039359 1818 / 0 AT3G22790 1402 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10022079 927 / 0 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10041192 834 / 0 AT4G14760 744 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10021908 817 / 0 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10014687 753 / 0 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10006896 729 / 0 AT1G03080 927 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10006606 522 / 3e-166 AT3G22790 368 / 3e-111 Kinase interacting (KIP1-like) family protein (.1)
Lus10042627 428 / 7e-129 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10002655 155 / 1e-37 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1)
Lus10025717 155 / 2e-37 AT2G22560 497 / 6e-158 Kinase interacting (KIP1-like) family protein (.1)
PFAM info
Representative CDS sequence
>Potri.010G083300.1 pacid=42796983 polypeptide=Potri.010G083300.1.p locus=Potri.010G083300 ID=Potri.010G083300.1.v4.1 annot-version=v4.1
ATGGCAACACTATTACATTCTGAGTCCAGACGATTATATTCTTGGTGGTGGGACAGCCACATTAGTCCAAAGAATTCAAAATGGCTTCAAGAAAATCTCA
CAGATATGGATGCCAAAGTCAAAGCAATGATCAAGCTCATTGAAGAAGATGCCGATTCTTTTGCAAGGAGGGCAGAAATGTACTATAAGAAGCGTCCTGA
ACTGATGAAATTGGTGGAGGAATTCTACAGAGCTTACCGTGCATTAGCCGAGAGATATGATCATGCAACTGTGGAGCTCCGCCAGGCTCATCGAACCATG
GCAGAAGCATTTCCCAACCAAGTATCTTATGCACCGGGTGATGAGTCACCCTCAGGCTCTTTTGGCCCTGATGGTGAGCCGCACACCCCAGAAATGCCAC
ATCCTATCTGTGCATTTCTTGACCCAGATGGTTTGCATAGGGATTCATTTGGACTCTCTATGGAAAGGAATGGGGGGTATCCTGAAGAATCAGACTCTGG
AATAAACAAAAAAGGTTTAAAGCAGCTCGATGAGTTGTTTATGTCACGAGAAGCGGCTTCTCAAGTTTCAAAAGTCGCAGATGGAAAAATGAAAAAAGGC
CTGAAGGTTCATGAAGCAGCAGAAACTGAAGTTCAAATCTTAAAGAAAGCTCTTTCAGAGATTCAAACTGAGAAGGAAGCTGCTCTTCTTCAATACCAGC
AGAGCTTGCAGAAGCTATCCAGCTTGGAGAGAGAACTCAAGGATGTCGGAGGTCTTGATGAAAGAGCAAGCAGAGCAGAAATTGAAATTAAGATCCTGAA
GGAAACTCTTGCTAAATTAGAAGCCGAAAGGGATGCTGGTCTTCTTCAGTACAATAAATGCTTGGAAAGGATATCTGCTTTAGAGAATGTGATCTCTCAA
ACGGAAGAGGATTCCAAAGGACTCAATGAACGAGCTATTAAAGCTGAAATAGAAGCTCAACATCTCAAGCAAGAACTTTCCGCATTAGAGGCTGAAAAGG
AAGCTGGTCTTCTTCAGTACAACCAATGTCTTCAACTGTTATCCAGTTTGCGGAAGAAAATCTTTATTGCTGAGGAAAATTCTAGAATGCTTAATGAGCT
AACCGAAAGAGCAGAAACTGAAGCTAAAGCACTGGAGAAGGCCCTCGCTAAATTGAAGGAAGAGAAAGAAGCTGCAGAACTTCAGTATGAGCTGTGCTTA
GAGAAAATAGCTATGATGGAGAGTGAAATTTTTCATGCTCAAGAGGATGTCAATCGATTAAACAGCGAAATTCTGACGGGGGCAGCAAAATTGAAAACTG
TAGAAGAACAATGTTTCCTGTTAGAGAGATCAAATCATTCTCTGCAGTCAGAGGCAGAGAATTTGGCACAGAAGATAGCAACAAAGGATCAAGAACTTTT
AGAGAAGGAAAATGAGTTGGAGAAACTTCAGGCTTCACTGCAAGACGAACAGTCACGTTTTATTCAAGTTGAAGCTACTCTGCAGACCTTGCAGAAATTG
CACTCTCAATCTCAAGAGGAGCAGAAAGCTTTGGCATTTGAGCTTCAAAATCGTCTCCAAATCTTGAAGGATTTGGAGATATCCAACCATGATCTGCAGG
AGAACCTCCAGCAGGTTAAGGAAGAGAACCAGAGCCTCAATGAACTGAACAGCAATTCCGTTATTTCAATAACAAATTTGAAAAATGAAATTTTTAGCTT
GAAGGAAATGAAAGAGAAACTTGAAGAGGATGTTTCCCTACAAGTGGCTCAGAGCAATTCCCTACAGCAAGAGATTTACCGTTTGAAGCAGGAAATTGAG
TGTTCGAACACAAGATATTGGGCCTTAATGGAGCAAGTGGACTTGTTAGGTTTAAGTCCAGAGTGCCTTGGTTCATCTGTGAAGAACTTGCAAGATGAAA
ACTCGAAGCTAAAAGAGGTCTGCAGAAAGGACTCAGAAGAAAAGGAAGTTCTCCATGAAAAGTTGAGGGCAATGGATAAACTTATGGAGAAGAATGTGGC
ATTGGAAAGTTCCCTCTCAGATTTAAATCGCATGCTGGAAGGGTCAAGAGAGAAGGTTAAAGAGTTGCAGGAGTCCTCCCAGTTTCTTCAGGGAGAAAAA
TCCAGTCTTGTTGCTGAAAAATCCATCCTGCTTTCTCAGTTACAGATTATGACTGAGAATGTGCAGAAGCTCTTGGAGAAAAATGACTTGCTGGAGAATT
CTCTCTCTGGTGCAAATATTGAGCTCGAAGGTCTGAGGACAAGGTCAAGAAGCTTTGAAGAACTCTGCCAGACGCTAAAAAATGAGAAATCCAATCTTCA
AGATGAAAGAAGCTCCCTGGTCTTGCAGCTGAAAAATGTTGAAGAGAGACTGGGAAACTTAGAAAGGAGGTTTACAAGATTAGAAGAAAAATACACTGGT
CTGGAGAAGGAGAAAGATTCCACACTTTGTCAAGTAAAGGACCTGTGGGGTTTTCTTGGTGTAGAAAAACAAGAGCGTTCATGCTATATACAGTCAAGTG
AATCTCGACTGGAAGATCTGGAAAACCAGGTCCATCAACTAAAAGAAAAAAGTAGGTTGAGTAAGAAAGATTTCGAAGAAGAACTAGATAAAGCTGTAAA
TGCTCAGGTTGAGATCTTCATCTTGCAAAAGTTTATTAAAGATTTAGAGGAGAAGAATTTATCTTTATTGATTGAGTGTCAGAAACATGTAGAAGCATCC
AAATTCTCAAATAAACTTATATCAGAGTTAGAGACCGAGAATCTTGAGCAGCAGGTTGAAGTAGAATTCTTGTTAGATGAAATTGAGAAGCTTAGAATGG
GCGTTCGTCAGGTTTTGAGAGCTCTTCAATTTGATCCGGTTAATGAGCACGAAGATGGGAGTCTTGCACATATTTTGGACAATATCGAGGACCTAAAAAG
TTTGGTCCTTGTAAAGGAGGATGAGAATCAGCAATTGGTGGTTGAGAATTCGGTGATGTTAACTTTACTCAAACAACTGGGATTAGATTGTGTTGAGCTC
GAGTCAGAGGAAAGCATGCTTGAGCACGAGTTAAAGATAATGGCAGAGCAACATACTATGCTGGAAACAAGTAACCACGAACTGCTAGAGATCAACAGGC
AATTGAGATTGGAAATGAACAAGGGAGAGCAGCAGGAGGAAGAATTGAAAGCTCAACTTGAAACCCAGCTTGTGAATCTGACAAGTTTGCAGGGTTCTTA
CCAGCAATTGAAAGAAGAAAATTTGAAGGCTCTTGGAGAAAACAGATCTTTGCTTCAAAAAGTTTTGGACCTCAAAGAGGAAACGCATGTACTTGAAGAG
GAAAACAGTAGCATTCTCCAGGAAGCTGTAGCTGTCAGTAACATCTCATCGGTGTTTGAGAGCTTTGCAACACAGAAAATCAAGGAACTTGAAGCCCTTT
CTGAAGATATCAGCTCTCTAAATGTGATTAACAGAGATCTCAAGCAGAAGGTTGAACTGTTGGGGTATAAACTGCAAACAAAAGAAGCTGAAGGTCTACA
TCTTAACAAAAGAATTGAAAATTTGCAGCAGGAGCTACAGGAAGAAAAGGATTTAACAGATCAATTAAACTGCCAAATTTTAATTGAAACAGATTTTCTT
CAAGAGAAAGAAAAAGAGCTTTTCCTTGCGGAACAGAATATCAAGGCTACAAACAACTTAAATGCAGAATTTTGCACCACTATCGAGGAGCTGAAGAGGC
AATGTGAAGAATCGAAAATTGCAAGAGATATCATAGAGAAGCGGGTTCTTGAACTGTCGCAGGTATGCACTGATCAGAAAATAGAAATTGAATGCCTTCA
TGAAGCAAAAGATAATATGGAGTCAGAAATGGCTACGTTACACAAGGAAATCGAGGAAAGACGGACCAGGGAAGATAACTTGAGTTTGGAGCTGCAAGGG
AGAAGCAATGAGTCTGAACTCTGGGAAGCTGAGGCTTCATCATTCTACTTTGATCTTCAAATATCTTCCATCCATGAAGTTCTACTCCAAAACAAGGTTC
ATGAGCTGACTGCAGTTTGTGGGATTCTTGAAGTAGAAAATGCCACAAAAGATATCGAGATTGAAAAAATGAAAGAAAGGTTTGGCATCCTGGAAAGTGA
AATTCAAAGAATGAAGGCTCATTTGTCTGCATATGTTCCAGTCATAAATTCGCTGAGAGAGAATTTAGAATACCTTGAGCACAATGCGCTTCTACGGACA
AGTCGAGGACAAACGGGAGTAGAAACGACTAGTCAACTTCATGAAAAGAGCCCTGAAGAACTCATAAATGATGAAAGCACTGCAGAAACAGATGGAATTT
CAGATTTGCTGAAGATGAAGTCTAGAATTAAAGTAGTTGGGGAGGCTATGATTAAAGAAATGGATAGGCTTGCAGCTGAAAAGGCAGTGGTGAAGGAAAT
GGATAAGCTTAAAATGCCAGAAATGGGAAACACTGAGAAACCCTTAATAAAAGGCGCTGAACGGTTACAGTTGAGATGTTGGTCAGCTGCAGAAAAGGAT
GTCAGGAAGGAAAAAGTGGAGCTTGCAAATGAGCCCGCTGATGCATCTAAGCCACAGAACAAAAAGCCTGAAGTTTCTGAAGTGAGGAATGGGATTTTGA
TGAAAGATATTCCTCTTGATCAGGTCTCAGAATGTTCATTGTATAGAAGCAAGAGAGAGCATCCTAGGAAAGATGATCAGACGCTTGAATTATGGGAATC
TGCTGAGAGAGACTGCCTTGATCCGATGGCTGACAAACAAAACCAGGAAGCTGCCTCACTGGAGAATGCCACTGCACGTCGTCAATTCAAAAATGCCAAA
CGAAAGAGTCAGGATCGCTCTTTGGAATTGCAGATTGAGAAGGAGGTGGGCGTTGACAAACTAGAGGTATCAACTAGCATCACTACAGAATCTAATCAAG
AAGGAAACGGAGGAAAGATCTTGGAGAGACTTGCTTCCGATTCTCAGAAATTAATTTCTCTTCAAACAACAGTGCAAAATTTGAAAAAGAAAATGGAGTT
GATGAAGAGAAGCAAGAGAGCCAATGATCTTGAATTTGAAAGAGTGAAAAGACAGCTACAAGAAGTTGAGGAGGCTGTTCATCAGTTGGTTGATGCTGAT
GACCAGCTAACAAAGGATGCTGAAGAGAGCCCCTCGTATTTGGAGGGAAACACTTCAGTAGAAGTGGAAGAGCATGACTCCATGCGCAGAAAAAGAGTGG
CAGAACAAGCACGGAAAAGGTCTGAAAAGATTGGAAGGTTGCAGTTTGAGGTGCAGAGCATCCAGAGCATTCTGCTAAAACTGGAGGATGGAAAGAAAAG
CAAAAGCAAGCGCAGATTCTCTGGAAGTAGAACAGGCATCCTCTTGAGGGACTTCATATACAGCAGTGGCAGGAGAAGCAGCAGAAGGCAGAGGAAGGGT
TGCTTTTGTGGGTGTGCAAGACCTTCAACTGAAGAAGACTGA
AA sequence
>Potri.010G083300.1 pacid=42796983 polypeptide=Potri.010G083300.1.p locus=Potri.010G083300 ID=Potri.010G083300.1.v4.1 annot-version=v4.1
MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTDMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATVELRQAHRTM
AEAFPNQVSYAPGDESPSGSFGPDGEPHTPEMPHPICAFLDPDGLHRDSFGLSMERNGGYPEESDSGINKKGLKQLDELFMSREAASQVSKVADGKMKKG
LKVHEAAETEVQILKKALSEIQTEKEAALLQYQQSLQKLSSLERELKDVGGLDERASRAEIEIKILKETLAKLEAERDAGLLQYNKCLERISALENVISQ
TEEDSKGLNERAIKAEIEAQHLKQELSALEAEKEAGLLQYNQCLQLLSSLRKKIFIAEENSRMLNELTERAETEAKALEKALAKLKEEKEAAELQYELCL
EKIAMMESEIFHAQEDVNRLNSEILTGAAKLKTVEEQCFLLERSNHSLQSEAENLAQKIATKDQELLEKENELEKLQASLQDEQSRFIQVEATLQTLQKL
HSQSQEEQKALAFELQNRLQILKDLEISNHDLQENLQQVKEENQSLNELNSNSVISITNLKNEIFSLKEMKEKLEEDVSLQVAQSNSLQQEIYRLKQEIE
CSNTRYWALMEQVDLLGLSPECLGSSVKNLQDENSKLKEVCRKDSEEKEVLHEKLRAMDKLMEKNVALESSLSDLNRMLEGSREKVKELQESSQFLQGEK
SSLVAEKSILLSQLQIMTENVQKLLEKNDLLENSLSGANIELEGLRTRSRSFEELCQTLKNEKSNLQDERSSLVLQLKNVEERLGNLERRFTRLEEKYTG
LEKEKDSTLCQVKDLWGFLGVEKQERSCYIQSSESRLEDLENQVHQLKEKSRLSKKDFEEELDKAVNAQVEIFILQKFIKDLEEKNLSLLIECQKHVEAS
KFSNKLISELETENLEQQVEVEFLLDEIEKLRMGVRQVLRALQFDPVNEHEDGSLAHILDNIEDLKSLVLVKEDENQQLVVENSVMLTLLKQLGLDCVEL
ESEESMLEHELKIMAEQHTMLETSNHELLEINRQLRLEMNKGEQQEEELKAQLETQLVNLTSLQGSYQQLKEENLKALGENRSLLQKVLDLKEETHVLEE
ENSSILQEAVAVSNISSVFESFATQKIKELEALSEDISSLNVINRDLKQKVELLGYKLQTKEAEGLHLNKRIENLQQELQEEKDLTDQLNCQILIETDFL
QEKEKELFLAEQNIKATNNLNAEFCTTIEELKRQCEESKIARDIIEKRVLELSQVCTDQKIEIECLHEAKDNMESEMATLHKEIEERRTREDNLSLELQG
RSNESELWEAEASSFYFDLQISSIHEVLLQNKVHELTAVCGILEVENATKDIEIEKMKERFGILESEIQRMKAHLSAYVPVINSLRENLEYLEHNALLRT
SRGQTGVETTSQLHEKSPEELINDESTAETDGISDLLKMKSRIKVVGEAMIKEMDRLAAEKAVVKEMDKLKMPEMGNTEKPLIKGAERLQLRCWSAAEKD
VRKEKVELANEPADASKPQNKKPEVSEVRNGILMKDIPLDQVSECSLYRSKREHPRKDDQTLELWESAERDCLDPMADKQNQEAASLENATARRQFKNAK
RKSQDRSLELQIEKEVGVDKLEVSTSITTESNQEGNGGKILERLASDSQKLISLQTTVQNLKKKMELMKRSKRANDLEFERVKRQLQEVEEAVHQLVDAD
DQLTKDAEESPSYLEGNTSVEVEEHDSMRRKRVAEQARKRSEKIGRLQFEVQSIQSILLKLEDGKKSKSKRRFSGSRTGILLRDFIYSSGRRSSRRQRKG
CFCGCARPSTEED

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT3G22790 Kinase interacting (KIP1-like)... Potri.010G083300 0 1
AT1G19835 Plant protein of unknown funct... Potri.005G237100 4.24 0.8727
AT1G27920 MAP65-8 microtubule-associated protein... Potri.003G173300 5.74 0.8736
AT2G35630 GEM1, MOR1 MICROTUBULE ORGANIZATION 1, AR... Potri.001G443200 6.32 0.8489 MOR2,Pt-MOR1.2
AT5G42710 unknown protein Potri.002G261700 6.70 0.8720
AT4G29230 NAC ANAC075, NST9 NAC domain containing protein ... Potri.018G068700 6.92 0.8711
AT1G57560 MYB ATMYB50 myb domain protein 50 (.1) Potri.010G004300 13.22 0.8005
AT2G31930 unknown protein Potri.001G232200 13.26 0.8484
AT1G24460 TNO1 TGN-localized SYP41 interactin... Potri.010G052600 14.49 0.7939
AT1G17950 MYB AtMYB52, BW52, ... myb domain protein 52 (.1) Potri.015G033600 17.32 0.8463 MYB.38,MYB090
AT3G22790 Kinase interacting (KIP1-like)... Potri.008G156200 17.66 0.7567

Potri.010G083300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.