Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	N21L6
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G70260 415 / 4e-145 nodulin MtN21 /EamA-like transporter family protein (.1) AT1G60050 362 / 2e-124 Nodulin MtN21 /EamA-like transporter family protein (.1) AT5G40240 191 / 1e-57 nodulin MtN21 /EamA-like transporter family protein (.1.2) AT5G40230 185 / 2e-55 nodulin MtN21 /EamA-like transporter family protein (.1) AT3G28050 182 / 5e-54 nodulin MtN21 /EamA-like transporter family protein (.1) AT4G15540 159 / 2e-45 EamA-like transporter family (.1) AT4G30420 149 / 1e-41 nodulin MtN21 /EamA-like transporter family protein (.1) AT4G01440 149 / 1e-41 nodulin MtN21 /EamA-like transporter family protein (.1) AT3G56620 146 / 1e-40 nodulin MtN21 /EamA-like transporter family protein (.1) AT2G40900 145 / 4e-40 nodulin MtN21 /EamA-like transporter family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G073200 [exp] 272 / 3e-89 AT5G40240 254 / 4e-82 nodulin MtN21 /EamA-like transporter family protein (.1.2) Potri.008G145800 [exp] 205 / 3e-63 AT3G28050 283 / 2e-93 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.001G337100 [exp] 198 / 2e-60 AT3G28050 367 / 4e-126 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.001G032100 [exp] 190 / 2e-57 AT3G28050 224 / 3e-70 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.003G192900 [exp] 172 / 3e-50 AT3G28050 222 / 1e-69 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.002G040200 [exp] 156 / 2e-44 AT1G44800 261 / 1e-84 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.016G031400 [exp] 153 / 8e-43 AT5G07050 504 / 4e-179 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.006G033500 [exp] 153 / 9e-43 AT5G07050 474 / 5e-167 nodulin MtN21 /EamA-like transporter family protein (.1) Potri.005G176100 [exp] 152 / 1e-42 AT4G08290 427 / 2e-149 nodulin MtN21 /EamA-like transporter family protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010696 [exp] 382 / 2e-131 AT1G70260 345 / 5e-117 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039481 [exp] 222 / 1e-69 AT5G40240 265 / 2e-86 nodulin MtN21 /EamA-like transporter family protein (.1.2) Lus10034877 [exp] 198 / 8e-61 AT5G40230 207 / 3e-64 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10010695 [exp] 198 / 2e-60 AT3G28050 280 / 3e-92 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039479 [exp] 189 / 6e-57 AT3G28050 457 / 1e-161 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039425 [exp] 188 / 2e-56 AT3G28050 453 / 4e-160 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039478 [exp] 179 / 1e-52 AT3G28050 385 / 2e-133 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039429 [exp] 171 / 5e-49 AT3G28050 354 / 6e-120 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10039428 [exp] 167 / 7e-49 AT3G28050 343 / 2e-117 nodulin MtN21 /EamA-like transporter family protein (.1) Lus10022187 [exp] 156 / 2e-44 AT4G08300 270 / 7e-88 nodulin MtN21 /EamA-like transporter family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [poplar] [flax] DMT PF00892 [poplar] [flax] EamA EamA-like transporter family
Representative CDS sequence Show only first row Show all	>Potri.010G096100.1 pacid=42799683 polypeptide=Potri.010G096100.1.p locus=Potri.010G096100 ID=Potri.010G096100.1.v4.1 annot-version=v4.1 ATGGGAGTGGGTTCTAAGTTAGGGGAAGTAGCACCATTTACAGTGATGGTGATAATGGAAGGTTGCACTATCGCACTGACCATTATGGCCAAAACAGTGA TGTCTAGAGGGATGAGCCCTTTTGTATTTGTTGTCTATACCAACGCGCTTGGCACCCTCATTCTCCTCCCCTATTCCGTCTTGTATCACAGGGAAAGAGC AGAACAACCACTCTTCACCTTGCCAGTTTTCTTGCGATTCTTCTTCCTGGGTTTGACAGGGATAGCTTTATCACAGAATCTTGCATTTGTGGGCCTGAGC TACAGTTCACCGATAGTCGTTTGTGCAATGGGCCTTTTGATCCCTGCTTTTTCCTTCATTCTGTCTGTCGTCCTCAGGAGGTCGAAGGTAGAATGGAGAT GCTCAAGTTTCCAATTCAAAGTGATCGGCACCTTGGTGTCAATCATGGGCGCAATCTCGGTGGTCATTTACAAGGGCCCATATATACGACCTTCATCATC TTCCCAAAAACTGCAGCATTCCGAACACCAACTTTTCGTTTTCTACTCATCACCAGACAATTGGATTCTTGGTTGCATGTTGCTTGCTGCATCTTTTTTT TGTGTTTCACTGTGGAACATTATCCAGTTGGGTACTATCAAACTCTATCCCCAAGTAATGAAAATAGCGTCTTTTTATAGCTTAGCTGGGACTATTCAAT GTGCAATATTCTCTTTGATTGTAGAGAGAGACTTGAATGCTTGGAAATTGAGGCTTAATATGGAATTGCTTCTCATTGTTATCACGGCCATCTTTGGGAG TGTCGTCCGCAGCAGTGTTCAAATCTCGTGCACACGCATGAAGGGCCCTTTTTACGTTCCCTTGTTTCAACCATTTAGGATATTTTGGGCTACCTTTTTC GGCGTCGGCTTCTTCGTAAATGGTCTCCATTATGGAAGTGTTATAGGAGCCGTAATATCTGGAGTGGGTTACTATACAGTATCATGGGGTCAGATGAGAG GAGATGAAAAACAGGAGGAGAGTGTCAGGTCCTCCGATGAGAAGAACCCTCTCCTACAAGAAGACTCGGAGGTGTAG
AA sequence Show only first row Show all	>Potri.010G096100.1 pacid=42799683 polypeptide=Potri.010G096100.1.p locus=Potri.010G096100 ID=Potri.010G096100.1.v4.1 annot-version=v4.1 MGVGSKLGEVAPFTVMVIMEGCTIALTIMAKTVMSRGMSPFVFVVYTNALGTLILLPYSVLYHRERAEQPLFTLPVFLRFFFLGLTGIALSQNLAFVGLS YSSPIVVCAMGLLIPAFSFILSVVLRRSKVEWRCSSFQFKVIGTLVSIMGAISVVIYKGPYIRPSSSSQKLQHSEHQLFVFYSSPDNWILGCMLLAASFF CVSLWNIIQLGTIKLYPQVMKIASFYSLAGTIQCAIFSLIVERDLNAWKLRLNMELLLIVITAIFGSVVRSSVQISCTRMKGPFYVPLFQPFRIFWATFF GVGFFVNGLHYGSVIGAVISGVGYYTVSWGQMRGDEKQEESVRSSDEKNPLLQEDSEV

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G70260			nodulin MtN21 /EamA-like trans...		Potri.010G096100 [exp]	0	1	N21L6
					Potri.009G023001 [exp]	33.85	0.7711
AT1G11530		ATCXXS1	C-terminal cysteine residue is...		Potri.004G031700 [exp]	80.61	0.8006	PtrcCXXS1
AT4G31980			unknown protein		Potri.003G206301 [exp]	123.61	0.8031
AT1G49180			protein kinase family protein ...		Potri.019G011600 [exp]	132.90	0.8015
AT5G45480			Protein of unknown function (D...		Potri.006G013400 [exp]	202.93	0.7734
AT1G52950			Nucleic acid-binding, OB-fold-...		Potri.003G004401 [exp]	212.44	0.7525
AT5G46070			Guanylate-binding family prote...		Potri.005G168402 [exp]	218.65	0.7753

Compare expression of checked genes

Potri.010G096100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.