Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	NHX8.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G01980 1362 / 0 ATSOS1, SOS1, ATNHX7 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) AT1G14660 935 / 0 ATNHX8 SODIUM HYDROGEN EXCHANGER 8, Na+/H+ exchanger 8, Na+/H+ exchanger 8, Na+/H+ exchanger 8 (.1), Na+/H+ exchanger 8 (.2) AT1G79610 78 / 1e-14 ATNHX6 Na+/H+ antiporter 6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 (.1) AT1G54370 71 / 2e-12 NHX5, ATNHX5 NA+/H+ ANTIPORTER 5, sodium hydrogen exchanger 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G140700 [exp] 1952 / 0 AT2G01980 1345 / 0.0 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) Potri.007G100500 [exp] 196 / 3e-57 AT2G01980 73 / 7e-15 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) Potri.016G000200 [exp] 71 / 3e-12 AT1G79610 724 / 0.0 Na+/H+ antiporter 6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013798 [exp] 986 / 0 AT2G01980 819 / 0.0 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) Lus10039133 [exp] 951 / 0 AT2G01980 1319 / 0.0 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) Lus10038725 [exp] 209 / 1e-61 AT2G01980 229 / 9e-70 ARABIDOPSIS SALT OVERLY SENSITIVE 1, ARABIDOPSIS NA+/H+ ANTIPORTER 7, sodium proton exchanger, putative (NHX7) (SOS1) (.1) Lus10038727 [exp] 70 / 6e-12 AT1G79610 749 / 0.0 Na+/H+ antiporter 6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 (.1) Lus10039131 [exp] 59 / 3e-08 AT1G79610 677 / 0.0 Na+/H+ antiporter 6, ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0064 [poplar] [flax] CPA_AT PF00999 [poplar] [flax] Na_H_Exchanger Sodium/hydrogen exchanger family
Representative CDS sequence Show only first row Show all	>Potri.010G100900.3 pacid=42799137 polypeptide=Potri.010G100900.3.p locus=Potri.010G100900 ID=Potri.010G100900.3.v4.1 annot-version=v4.1 ATGGGGAGTGTTACAGAAGAAGAGGGAGTTTTACTGTACAGAGTATTGTCGTCGTCGTCTTCCTCGTCAGCTTCTTCGGATGAATGGAATCCAACGGACA CTGTGATTTTCTTTGGGTTAAGTTTGGGGCTTGGGATTGCGTGCAGACATGTCTTGCGTGGTACCCGAGTCCCTTACACTGTTGCTCTACTCGTCATCGG CATTGCTCTTGGATCCTTAGAATATGGTACCAGTCATAAACTGGGAAGGATTGGGGACGGAATCAGGCTCTGGGCACATATTGATCCTGACCTTTTATTG GCTGTTTTCCTTCCTGCCCTTCTTTTTGAGAGTTCCTTTTCAATGGAAGTCCACCAAATTAAGAGGTGTATGGCACAAATGCTTCTACTTGCCGGTCCTG GAGTTCTGATTTCAACATGTTGTCTTGGGTGTGCTTTGAAGCTCATTTTCCCATATAATTGGAATTGGACAACCTCCTTGTTGCTTGGTGGACTTCTGAG TGCTACTGATCCTGTGGCTGTTGTTGCTCTGTTGAAAGAGCTTGGTGCAAGCAAAAAATTGAGTACAATAATTGAAGGAGAATCCCTAATGAATGATGGG ACAGCAATTGTGGTCTATCAGCTATTCTATCGGATGGTCCTTGGGGAGAGCTTTAACTGGGTTTCCATACTCAAATTTCTAACTCAAGTCTCACTTGGAG CTGTAGGCATTGGTATTGCTTTTGGAATTGCATCTGTTTTGTGGCTCGGGTTTATCTTTAATGACACGGTGATAGAGATTGCGCTGACACTAGCTGTGAG CTACATTGCCTACTTCACTGCTCAAGAGGGTGCTGGTGTTTCTGGTGTTTTGGCAGTGATGACTTTAGGAATGTTTTACGCTGCAGTAGCCAGGACTGCT TTCAAGGGTGATGGTCAACAGAGCTTGCATCATTTTTGGGAAATGGTTGCTTATATTGCGAATACTCTAATTTTCATCTTAAGCGGCGTTGTTATAGCAG AAGGTGTTCTGAGCAGTGGCAATATTTTTCATAACCATGGGCATGCATGGGGCTACCTATTTCTTCTGTACATTTTTGTGCAACTATCCCGGTTTGTAGT TGTTGGAGTATTGTATCCATTTTTACGATATTTTGGTTATGGTTTGGATTGGAAGGAAGCAACCATTCTCATATGGTCAGGTCTTCGAGGGGCTGTTGCA TTATCACTTTCATTGTCTGTCAAGCGCACTAGTGACAGCTCAATGTATCTCAGTTCTGAAACAGGAACCTTGTTCGTTTTCTTCACTGGTGGAATCGTAC TTCTGACTCTTATCGTGAATGGGTCAACAACACAGTTTATTTTACATCTTCTAGACATGGATAGGATATCAGCTACCAAGAAGCGTATATTGAACTATAC AAAGTATGAAATGCTGAACAAAGCACTAGAGGCTTTTGGTGATCTTGGAGATGATGAGGAACTTGGACCTGTCGACTGGCCTACAGTTAAAACATATATT GCAAGCTTAAATAATTTGGAAGGGTCATTTGAACACCCCCATAGTGCATCTGAAGCTGGCAATAATTTAGACCCAAATAATTTGAAAGATATCCGCTTAC GCCTTCTAAATGGAGTCCAAGCTGCTTATTGGGGCATGCTTGATGAGGGAAGGATAATGCAAACAACTGCAAATATTTTGATGCAATCAGTAGATGAAGC AATCGACCTGGCTTCCCATGAGTGTCTATGTGATTGGAAGGGCTTGCGATCCAATGTTCATTTTCCAAGTTATTACAAGTTCCTTCAAGCAAGCATTTTC CCTCAGAGGATGGTTACTTATTTCACTGTGGAGAGGCTTGAATCTGCATGCTACATTTGTGCTGCATTTCTACGTGCCCATAGAATTGCACGGCGGCAAC TACACGACTTTATTGGTAAATTGGGTGGCAGTGATATTGCTTCTATAGTCATTAACGAAAGTGAGGCAGAAGGAGAAGAAGCAAGAAAATTCTTGGAAGA TGTCCGTGTTACATTTCCTCAGGTTTTACGTGTTGTGAAAACAAGACAAGTAACATATTCAGTGCTGAACCATTTAATTGATTATGTCCAAAATCTTGAG AAGGTTGGGTTATTGGAAGAAAAGGAAATGCTTCATCTTCACGATGCTGTCCAGACTGACTTGAAAAGACTTCTAAGAAATCCTCCTTTGGTAAAGGTTC CCAAAATAACTGACTTGATTAGTGTCCATCCGCTCTTGGGAGCCCTTCCTTCTATGGTGCGTAAAGCCCTTGAAGGTTCTGCAAAAGAAATAATGAAACC ATGCGGAGTGCCCCTTTACAAAGAAGGCTCCAAACCAAATGGTGTCTGGCTTATTTCCAATGGTGTTGTCAAGTGGACAAGCAAGAACATTAGGAGCAGG CACGCACTGCATCCAACTTTTACACATGGGAGCACACTGGGCCTGTATGAACTGCTAGTTGGGAAACGTTGCATGTGTGACATAATAACAGATTCTGTGG TACTCTGCTTTTTTATTGAAAGTGAGAAAATACTTTCGGTGCTAGGGTCTGACCCTGCAGTTGAAGATTTCCTATGGCAGGAAAGTGCAATCGTTCTTGC CAAACTCTTGCTTCCTCAAGTATTTGAAAAAATGCCATTGCAAGAATTGAGAGTCCTTGTTGCACGAAGGTCAGTGATCACCACATACATTAGGGGAGAA ACTATAGAAGTGCCGCATCATTCTCTTGGCTTTCTATTAGAAGGATTCATAAAAGCCCATGGTTTCCAAGAATTAATTGCATCACCTGCAGTCCTTTTGC CTCTGCAAGGAAATCAAAGCTCTCAAAACATAGAGATATCAGGTTCCCAGGCAGCCAGTTTCTCTCATCAAGGATCCCGATATCAAGTTGAGGCGAGAGC AAGAGTAATCTTTTTTGACATTGCAGCATTTGAAGTTGATGGTGCTTTGAGGAGAAGGCCATCCTCATTAGCATCAGTTGATCGCCCCAATAGACCTTTA ACTAGAGAGCATGGTGGTCTTATGAGTTGGCCTGAAAATTTCTACAGACCAAGGGAACGTAAGCCAAACTGTGAAGGGACATATCGACCAGCAAATAGCT TGTCTGCAAGAGCAATGCAGCTGAGTATCTTTGGCAGCATGGTTGATATGCGGAGGCGTGCCCACAGCTTTTCCAGTAGCCAAGTAAAGCGATCACACAG CATGTCAGTTTTAAGAATGGCATCGTTTCGTAACCGCCAACAAGTTCCTGTCCCATCAGAAGGAGCTACTTCTGCAAGGATGAGTCTTGAAGTGAGAAAC TTGATTGGAAAAACTCCTGCTCCCCAACTGCATAGTGCAGGCACAAATGAGACTCACACCATGGATAATTACAGTGATGAATCTGATGCTGAAGATGAAA TCGTGGTAAGAATTGATTCACCTAGTAGGCTGTCATTCCATCAGGAATCTTAG
AA sequence Show only first row Show all	>Potri.010G100900.3 pacid=42799137 polypeptide=Potri.010G100900.3.p locus=Potri.010G100900 ID=Potri.010G100900.3.v4.1 annot-version=v4.1 MGSVTEEEGVLLYRVLSSSSSSSASSDEWNPTDTVIFFGLSLGLGIACRHVLRGTRVPYTVALLVIGIALGSLEYGTSHKLGRIGDGIRLWAHIDPDLLL AVFLPALLFESSFSMEVHQIKRCMAQMLLLAGPGVLISTCCLGCALKLIFPYNWNWTTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDG TAIVVYQLFYRMVLGESFNWVSILKFLTQVSLGAVGIGIAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGAGVSGVLAVMTLGMFYAAVARTA FKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLSSGNIFHNHGHAWGYLFLLYIFVQLSRFVVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVA LSLSLSVKRTSDSSMYLSSETGTLFVFFTGGIVLLTLIVNGSTTQFILHLLDMDRISATKKRILNYTKYEMLNKALEAFGDLGDDEELGPVDWPTVKTYI ASLNNLEGSFEHPHSASEAGNNLDPNNLKDIRLRLLNGVQAAYWGMLDEGRIMQTTANILMQSVDEAIDLASHECLCDWKGLRSNVHFPSYYKFLQASIF PQRMVTYFTVERLESACYICAAFLRAHRIARRQLHDFIGKLGGSDIASIVINESEAEGEEARKFLEDVRVTFPQVLRVVKTRQVTYSVLNHLIDYVQNLE KVGLLEEKEMLHLHDAVQTDLKRLLRNPPLVKVPKITDLISVHPLLGALPSMVRKALEGSAKEIMKPCGVPLYKEGSKPNGVWLISNGVVKWTSKNIRSR HALHPTFTHGSTLGLYELLVGKRCMCDIITDSVVLCFFIESEKILSVLGSDPAVEDFLWQESAIVLAKLLLPQVFEKMPLQELRVLVARRSVITTYIRGE TIEVPHHSLGFLLEGFIKAHGFQELIASPAVLLPLQGNQSSQNIEISGSQAASFSHQGSRYQVEARARVIFFDIAAFEVDGALRRRPSSLASVDRPNRPL TREHGGLMSWPENFYRPRERKPNCEGTYRPANSLSARAMQLSIFGSMVDMRRRAHSFSSSQVKRSHSMSVLRMASFRNRQQVPVPSEGATSARMSLEVRN LIGKTPAPQLHSAGTNETHTMDNYSDESDAEDEIVVRIDSPSRLSFHQES

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G01980		ATSOS1, SOS1, A...	ARABIDOPSIS SALT OVERLY SENSIT...		Potri.010G100900 [exp]	0	1	NHX8.2
AT2G38290		AMT2;1, ATAMT2	AMMONIUM TRANSPORTER 2;1, ammo...		Potri.005G054900 [exp]	5.47	0.8919
AT4G35520		MLH3, ATMLH3	MUTL protein homolog 3 (.1)		Potri.005G101900 [exp]	8.24	0.8787
AT3G59580		NLP9	Plant regulator RWP-RK family ...		Potri.017G022728 [exp]	8.66	0.8945
AT5G01310	bHLH	APTX, bHLH140	APRATAXIN-like (.1)		Potri.016G120200 [exp]	13.74	0.8856
AT5G01270		CPL2, ATCPL2	carboxyl-terminal domain (ctd)...		Potri.006G099402 [exp]	15.49	0.8802
AT1G63855			Putative methyltransferase fam...		Potri.005G109000 [exp]	18.89	0.8539
AT1G34150			Pseudouridine synthase family ...		Potri.002G061650 [exp]	20.44	0.8767
AT1G63690		ATSPPL2	SIGNAL PEPTIDE PEPTIDASE-LIKE ...		Potri.001G103100 [exp]	20.61	0.8716
AT3G06080		TBL10	TRICHOME BIREFRINGENCE-LIKE 10...		Potri.005G208301 [exp]	21.90	0.8837
AT4G27220			NB-ARC domain-containing disea...		Potri.001G446332 [exp]	22.97	0.8827

Compare expression of checked genes

Potri.010G100900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.