Potri.010G135500 [POPLAR]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Flax homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Potri.010G135500.3 pacid=42798945 polypeptide=Potri.010G135500.3.p locus=Potri.010G135500 ID=Potri.010G135500.3.v4.1 annot-version=v4.1
ATGAAGCCTCACATATTATTACTTACAAACAATCTCCCTTTACCATCTCCAAATCTTCCCTTTGGAACAAGAAAGTCTCTCCCTCTCGCATTTCTCAGCA
GAAACACTTCCATTCACTTCCCTCGCTTTCAAAGCCCTAAATTTAAGGTTGTTGAAGCGGTGAGATTTGATTGTCCCGTAACGGACGTTACTGAATTGGA
AGGCGAGGATTGTGAGTTGGTGCTTGAGACTTGCATCACGCGCACATTGCCTCCGGCATTGACGCTGGAGCGAGGGATAGAGAGCATTAAGGCTGCCGTG
GATGATTTAAAGTCGAATCCTCCGTGTTCTCTTCACGGTGTTTTCAGATTTCAGGTTGCTGTGCCGCCGAGTCCAAAAGCTTTGAATTGGTTCTGCTCGC
TACCGGAGTCGGATGGTGTGTTCCCTCGTTTTTTTCTAAGCAAGGAGACAGAGGATGCGTCGTGCAAAAAACTCTATTTGCATAGGACTCGTGGAGTTTT
CGGGCTTGGATCAGCAATTTGCTTTGAAGCGTCCTCTTACCGTGCTCCAGAAAAGCTGAAGAGGATCAGAAGATATCTCTCAAGTGATTCCACCCATATA
ATGACTTATGGTTTTATGGATATTAATTTCAACAAGGAGTCATCTTCAATCAAGCATGAGGCTGGTTCGTTTTACTTCTTGATTCCTGAGGTTGAGTTAG
ATGAGCAAGAAGAAGCATCTATTCTTGTCATAACTTTGGCATGGGATGAAAATTCCTGCTGGACTTTTGAACAAGCAATTCAATCTTTTGAGTCATCCAT
TGACCAGGCCAGTTTTTGCTTTTGGCCAGACACAGAGAGATGCTATTCCAAGTGCATAAAATCTACCTTCAGAAATTTCAATTTGATGGAGGCTAAAACA
TTCCAGATGGCTTGTACAGATGCTCTGTTTTTGGACAGAAGGGATTATCAGGCTGACACCACAGAACTGGTATCCCCTTTTTCCTGGACCATATTTTCCA
CTCAGTTTTGTTTCAGGCTTTCACCAGTGGTAGGCGTTTCGAGTAACATGTTGGATGATGCTGGTGAAACAAGTTACTCTCTGCAAGATCAATCAAATAT
CAATGCTGTTTGGGCTTCACTTATAGTGGAAGAATGTTCTCGTCTTGGTATAATGTACTTTTGTGTAGCTCCAGGCTCAAGATCATCGCCTCTTGCCATC
GCTGCTTCCACTCATCCCCTAACAACATGTATTTCATGCTTTGATGAGCGCTCTCTTGCATTTCATGCTGTTGGTTATTCAAAGGGGTCTCATAAACCAG
CAGTCATCATAACATCATCAGGCACTGCAGTTTCAAATCTTCTTCCTGCTGTTGTGGAAGCTAGTCAGGATTTTGTGCCACTTCTATTGCTGACCGCAGA
TCGTCCTCCTGAGCTTCTTGATGCTGGGGCAAACCAAGCAATTAATCAGGTGAACCATTTTGGTTCTTTTGTGAGGTTCACCTTCAGTCTTCCTGCACCT
ACTGATAATATTCCTGCGCGGATGGTGCTTACGACAATTGACTCCGCTGTGCATTGGGCAACCTCTTTGCCATATGGCCCTGTTCATATTAATTGTCCTT
TCAGAGAGCCTCTGGATGATAGTTCAGACAATTGGATGTTAAGCTGTTTAAAAGGATTGGATATTTGGATGTCTGGTGCGGAACCATTCACTAAATATAT
TCAATTGCAAAATTCTCTTGCATGTAAAGATGGTGCTTGTGTCCCAATGGCAGAGGTTCTTGAAATAATTAAAGGGACTGATAGAGGGCTTTTACTTCTT
GGTGCAATTCACACAGAAGATGAAATATGGGCGGCGCTTATTTTGGCTAAACACCTTAATTGGCCTGTTGTAGCTGACATCTTATCAGGGCTAAGATTAA
GAAAGCTCCTTCCTTCTCTTCCTGAAATTGAAGAGAATGTTTTATTTGTTGATCATCTAGACCATGCTTTACTGTCGGAATGGGTCAGGGGTTGGATTCG
TTTTGATGTGATTGTTCAGATTGGAAGCCGAATAACAAGCAAGCGTGTTAGTCAAATGATGGAAGAATGTTTTCCGTGCACATATATCTTAGTTGACAAC
CACCCGTGCCGTCACGATCCATCACATTTTGTAACACACAGAGTGCAGTGCTCCATTCGTCAGTTTGCTGACAGCTTAATGAAAGCTCAATTTTCACACA
GGAACAGCAAATGGTGTTGTTTTCTACGAGTTTTGAATACAATGGTTGCCTGGGATATATCATTTCAAATTAACGCAGAGAACTCATTAACCGAGCCTCA
TGTTGCACATGTAATTACAGAAGCTCTTTCAGCCGAGTCTGCTCTTTTTGTTGGCAACAGCATGGTAATACGCGATGCAGACATGTATGGACACAATTGT
AAAACTCATGCTCATAGCATTGCACATATGATGTTAGACTCAAAACTTCCATATCTTGGGATAAGAGTGGCTGGCAACAGGGGAGCTAGTGGTATTGATG
GTTTGCTTAGCACAGCAATTGGTTTTGCTGTTGGATGCAATAAACAAGTGCTTTGTTTGGTTGGAGATGTTTCTATGCTTCATGATACAAATGGCTTGGC
AATTTTGACTCAGAGGGTGTCAAGGAAACCAATGAGGATACTTGTGATAAACAATCATGGTGGAGCAATTTTCAGTCTCCTTCCTATTGCAGATAAAACT
GACCCTCGAATATTGGATCAGTATTTCTACACTTCCCATAGAATATCAATTCATAAACTTTGTGCGGCACACAGTGTGAGACATTTACGAGTGAAGACGA
AGGTGCAACTTCAAGAGGCTTTACTTAAATTTGAACATGAGAAGACAGATTGTGTAATTGAAGTGGAGAGCGGCATTGGTGCCAATTCAACCTTCCACAG
TACTTTAAGAAAATCTGCACAGCAAGCAGCAGATCATGCTTTAAGCATTCTCTCAAGGCTTTCTGTTCGAGTTTCCATTTCAGATGGGTTATTTCTCTGC
AAGATCCATAAAATGGATTTTTCACTGTACAGAATTCAACTCTGTGCTCCTCCTACCTCGAGCTCTGTTGATCATCATCAGAATGAGTTCCATAGGGAAG
GTTATATTTTATCCGTGTCTCTTGAAGATGGAAGTGTTGGGTATGGTGAGGTTGCACCTCTTGAAATCCACAAAGAAAATCTGGCGGATGTAGAAGAGCA
GCTTCTATTTCTTCTTCATGTCATTAAAGGAATCAAGATTAATGTTTCCCTTCCCATTCTGAAAGGCTCTTTCACTTCTTGGATATGGAGCAACTTAGGA
ATTATGGAATGTTCAATCTTTCCAAGTGTTAGATGTGGTCTTGAAATGGCTGTCTTGAACGCCATAGCAGTAAGTCAAGGTTCCAGTTTTATAAGTATGC
TTCAACCTTGGATGATAAATGAGGAAATTTATGAAAAGTCAAGCGTTAAGATATGTGCCCTTATTGATTCTAACGGGACTCCCACTGAGGTTGCTTATAT
TGCTTCCTCACTTGTTGAAGAAGGATTCACTGCAATAAAACTCAAAGTTGCACGTCGGGCAGATCCCATTCAAGATGCTACAGTTATATGCAAAGTACGA
AAGGAAGTTGGTCCATGTATTGAACTCCGTGCGGATGCCAACAGAAAATGGACCTATGAAGAAGCTATCCAGTTTGGCTTCCTTGTAAAAGATTGTGACC
TACAATATATTGAGGAACCTGTTGAGAATGTTGATGATATTGTGAAGTTTTGTGAAGAAACTGGCTTACCTGCAGCTCTTGATGAAACTATCGACAATTT
TCAAGAAAGTCATCTTAAAATGCTTGCGAAGTATACTCACCCTGGAATAGTTGCTGTGGTTATCAAACCAAGTGTTGTTGGTGGGTTTGAAAAGGCAGCA
TTAATTGCACGATGGGCACAGAAGCATGGAAAAATGGCTGTTGTTAGTGCTGCATTTGAAAGTGGCTTAGGTTTGTCAACTTATATTCTATTCTCCTATT
ACCTGGAGCAGCTGAATGCTGTTTATACAGTTATGAACCGTGAAACCAGGCCATCTATAGCCCATGGTCTTGGAACTTATAGATGGCTTAAACAAGATGT
CACAGCTATACCTCTTGGGATTCATTATGATCCATGTAAAGGCTTTGTCGGAGCATCTGTTGCTGCTTCCATTCAACTCCTACAGAACTTTCAAGTCAAT
AACAATGTTATTCACAAAACTTTTAATGAAGAGCAAGTTCATAGATATCATTTGACAGTGAATTCAAAGAATTTTTCCTACTCCATCAAAGTTCATGAAG
TTGGACAAGAAAGCAATGATAATGTTGTTATATTTCTTCATGGATTTCTTGGAACTGGTGAAGATTGGGTCCCCATCATGAAGGCCATCTCAAGATCAGC
AAAATGCATTTCAATTGATCTTCCGGGACATGGGGGATCAAAAATACAAAATCATGGTAGTGAGGGAGCCCAAGAGGAAGCAACTTTGTCAATTGAAATA
GTTGCAGATGTATTATATAAGTTGATTCAAGGCATAACTCCTTTTAAGGTTACCCTGGTTGGATATTCTATGGGAGCTAGGATTGCATTGCACATGGCAC
TAAGGCTTAGTCATAAGATTGATGGAGCTGTTATAATATCTGGTAGCCCTGGCCTGAAGGATACAATGGCAAGAAAAATCCGTCAGGCTAAAGATGATTC
TAGGGCAGACTTCCTTGTTGCCTATGGTTTAGAACTCTTTCTTGATTCCTGGTATGCTGGAGAGCTCTGGAAGAGCCTGAGAAGTCATCCCCATTTTAAG
GAAATAGTTGCTGGCCGCTTGGTGCACGAGGATGTCCAAAGCCTTGCAAAAGCTCTGTCAGGCCTCAGCACTGGGAGCCAGCTGCCATTGTGGGAAGACT
TGAAGCGATGTGATTTGCCCCTTTTACTCATTGTTGGAGAGAAAGATGCGAAGTTCAAGTCAATTGCTCAAAAAATGTTCCATGAAGTTGTCCAAGATAG
GAAAGGTGAAGACCGCAGGGGGAACAATATTTGTGAGATACTTGAGGTTCCCAATTGTGGTCATGCTGTTCATTTGGAAAACCCTCTTCCTATTATTAGT
GCCATGAGGAAATTTTTGACCAGAGGAAGGAGTTCCAGAGCACAACAGTAA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Potri.010G135500.3 pacid=42798945 polypeptide=Potri.010G135500.3.p locus=Potri.010G135500 ID=Potri.010G135500.3.v4.1 annot-version=v4.1
MKPHILLLTNNLPLPSPNLPFGTRKSLPLAFLSRNTSIHFPRFQSPKFKVVEAVRFDCPVTDVTELEGEDCELVLETCITRTLPPALTLERGIESIKAAV
DDLKSNPPCSLHGVFRFQVAVPPSPKALNWFCSLPESDGVFPRFFLSKETEDASCKKLYLHRTRGVFGLGSAICFEASSYRAPEKLKRIRRYLSSDSTHI
MTYGFMDINFNKESSSIKHEAGSFYFLIPEVELDEQEEASILVITLAWDENSCWTFEQAIQSFESSIDQASFCFWPDTERCYSKCIKSTFRNFNLMEAKT
FQMACTDALFLDRRDYQADTTELVSPFSWTIFSTQFCFRLSPVVGVSSNMLDDAGETSYSLQDQSNINAVWASLIVEECSRLGIMYFCVAPGSRSSPLAI
AASTHPLTTCISCFDERSLAFHAVGYSKGSHKPAVIITSSGTAVSNLLPAVVEASQDFVPLLLLTADRPPELLDAGANQAINQVNHFGSFVRFTFSLPAP
TDNIPARMVLTTIDSAVHWATSLPYGPVHINCPFREPLDDSSDNWMLSCLKGLDIWMSGAEPFTKYIQLQNSLACKDGACVPMAEVLEIIKGTDRGLLLL
GAIHTEDEIWAALILAKHLNWPVVADILSGLRLRKLLPSLPEIEENVLFVDHLDHALLSEWVRGWIRFDVIVQIGSRITSKRVSQMMEECFPCTYILVDN
HPCRHDPSHFVTHRVQCSIRQFADSLMKAQFSHRNSKWCCFLRVLNTMVAWDISFQINAENSLTEPHVAHVITEALSAESALFVGNSMVIRDADMYGHNC
KTHAHSIAHMMLDSKLPYLGIRVAGNRGASGIDGLLSTAIGFAVGCNKQVLCLVGDVSMLHDTNGLAILTQRVSRKPMRILVINNHGGAIFSLLPIADKT
DPRILDQYFYTSHRISIHKLCAAHSVRHLRVKTKVQLQEALLKFEHEKTDCVIEVESGIGANSTFHSTLRKSAQQAADHALSILSRLSVRVSISDGLFLC
KIHKMDFSLYRIQLCAPPTSSSVDHHQNEFHREGYILSVSLEDGSVGYGEVAPLEIHKENLADVEEQLLFLLHVIKGIKINVSLPILKGSFTSWIWSNLG
IMECSIFPSVRCGLEMAVLNAIAVSQGSSFISMLQPWMINEEIYEKSSVKICALIDSNGTPTEVAYIASSLVEEGFTAIKLKVARRADPIQDATVICKVR
KEVGPCIELRADANRKWTYEEAIQFGFLVKDCDLQYIEEPVENVDDIVKFCEETGLPAALDETIDNFQESHLKMLAKYTHPGIVAVVIKPSVVGGFEKAA
LIARWAQKHGKMAVVSAAFESGLGLSTYILFSYYLEQLNAVYTVMNRETRPSIAHGLGTYRWLKQDVTAIPLGIHYDPCKGFVGASVAASIQLLQNFQVN
NNVIHKTFNEEQVHRYHLTVNSKNFSYSIKVHEVGQESNDNVVIFLHGFLGTGEDWVPIMKAISRSAKCISIDLPGHGGSKIQNHGSEGAQEEATLSIEI
VADVLYKLIQGITPFKVTLVGYSMGARIALHMALRLSHKIDGAVIISGSPGLKDTMARKIRQAKDDSRADFLVAYGLELFLDSWYAGELWKSLRSHPHFK
EIVAGRLVHEDVQSLAKALSGLSTGSQLPLWEDLKRCDLPLLLIVGEKDAKFKSIAQKMFHEVVQDRKGEDRRGNNICEILEVPNCGHAVHLENPLPIIS
AMRKFLTRGRSSRAQQ
|
DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.010G135500 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.