Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ADGT.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G03490 481 / 4e-168 UDP-Glycosyltransferase superfamily protein (.1) AT1G51210 455 / 3e-158 UDP-Glycosyltransferase superfamily protein (.1) AT1G73880 447 / 1e-154 UGT89B1 UDP-glucosyl transferase 89B1 (.1) AT1G06000 299 / 3e-97 UDP-Glycosyltransferase superfamily protein (.1) AT2G16890 230 / 5e-70 UDP-Glycosyltransferase superfamily protein (.1.2) AT2G36750 229 / 1e-69 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36780 229 / 1e-69 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 229 / 2e-69 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 229 / 3e-69 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36760 226 / 4e-68 UGT73C2 UDP-glucosyl transferase 73C2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G065100 [exp] 436 / 6e-150 AT1G73880 539 / 0.0 UDP-glucosyl transferase 89B1 (.1) Potri.006G272500 [exp] 259 / 3e-81 AT2G15490 318 / 1e-103 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.006G272600 [exp] 258 / 8e-81 AT2G15490 300 / 1e-96 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.018G008900 [exp] 249 / 3e-77 AT2G15490 312 / 1e-101 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.018G009000 [exp] 246 / 6e-76 AT2G15490 323 / 6e-106 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 245 / 1e-75 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 244 / 3e-75 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 243 / 8e-75 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.005G036100 [exp] 233 / 1e-70 AT2G15490 309 / 3e-100 UDP-glycosyltransferase 73B4 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036837 [exp] 504 / 8e-177 AT5G03490 468 / 2e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10036840 [exp] 504 / 8e-177 AT5G03490 468 / 2e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10034650 [exp] 426 / 7e-146 AT1G73880 484 / 6e-169 UDP-glucosyl transferase 89B1 (.1) Lus10013500 [exp] 308 / 8e-100 AT1G73880 379 / 2e-127 UDP-glucosyl transferase 89B1 (.1) Lus10007972 [exp] 276 / 1e-88 AT1G73880 355 / 1e-119 UDP-glucosyl transferase 89B1 (.1) Lus10021718 [exp] 256 / 4e-82 AT1G73880 314 / 8e-105 UDP-glucosyl transferase 89B1 (.1) Lus10026927 [exp] 249 / 3e-77 AT2G15480 310 / 2e-100 UDP-glucosyl transferase 73B5 (.1.2) Lus10020124 [exp] 248 / 1e-76 AT2G15490 301 / 4e-97 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10026926 [exp] 244 / 2e-75 AT2G15480 300 / 1e-96 UDP-glucosyl transferase 73B5 (.1.2) Lus10014083 [exp] 242 / 4e-74 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [poplar] [flax] GT-B PF00201 [poplar] [flax] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Potri.010G137000.1 pacid=42799572 polypeptide=Potri.010G137000.1.p locus=Potri.010G137000 ID=Potri.010G137000.1.v4.1 annot-version=v4.1 ATGACCACCACCACCACCACCAAGCAACCGCCACACGTCCTAGTGTTTCCCTATCCAGCTCTAGGCCACACCCTCCCTCTTCTAGACCTAACACACCAAC TCTCTCTTCATAACCTAACAATCACCATCTTGACCACACCCAAAAACCTCCCTACCGTTTCTCCTCTTCTTTCCACTCACCCACAAATCCACACCTTAGT CCTTCCCTTCCCATCTCACCCTTTAATCCCTGCAGGTGTTGAAAATGTCAAAGAGCTTGGTAATTCTGGAAACCTGGCCATTATTGCAGCATCTACCAAG CTCTCTGAACCCATTACCCTGTGGTTCAAGTCTCACACTAATCCTCCGGTTGCTATCATCTCTGATTTCTTTCTTGGCTGGACCCAACATCTGGCCCAAC ACTTAAACATACGGGGTTTTGCTTTTTATCCATCTGCGGCGTTTTTTGCTGGTATTTTAAATTATTGTTGGGGTAATCTGGAGAGTGTAAAGGTTTTGGA CGTTGTTGATTTTGTTGATTTGCCTAGATCACCGTCTTTTAAAGAGGAGCATCTGCCTTCTGTGTTCCGTAAGTACAGGGAATCCGACCCGGATTGTCAG CTCGTCAAGGACAGCTTGGTTGCAAATAAGTTGAGTTATGGATTTATTTTTAATAGTTTCGAGTCTTTGGAGGGTGAGTATTTGGGTTTTTTGAAGAGAG AATTCGGGCATGAGAGGGTTTATGCGGTTGGCCCTATTAATTTGTTGGGTCCGGAAAGCACCGATCGGGGCAACCCGGTAACGGATTCCTCTGGTAATGT GTTCAAGTGGCTAGATGGGTGTCCAGATGAGTCTGTGCTATATGTTTGTTTCGGGAGTCAAAAGCTGTTGAACAAGAAACAAATGGAGGCTTTGGCTGAT GGGCTCGAAAAGAGTATGGTCCGTTTCATTTGGGTCGTGAAAACAGGCACGGCCCAACAAGTTGAAGACGGATACGGGGTAGTACCCGATGGGTTCGATG AACGGTTGGCGGGTCGGGGTCTGGTTATAAGAGGATGGGCCCCACAGGTTAAGATACTGAGTCACAGAGCGGTTGGTTGGTTCTTGAGTCATTGTGGGTG GAACTCGATGCTAGAAGGGATAGTAGCTGGTGCGATGATACTGGCCTGGCCCATGGAAGCTGACCAGTTCATTGATGCTAGACTGTTGGTGGAGGAATTG GGAGCGGGAGTGGGGGCCTGTGAAGGGACAGCCACAGTGCCTGACTCGGAGGAGTTGGCAAAAGTGATAGGTGAGTCAATGAGTGAAAAAGGTGCGGGTG TGAAGATGAAGGCTAAGGAGCTGAGAAGGAAGGCATTGGAGGCCGTGAAAGAGGGTGGGAGCTCCTTGAATGACTTGAACGGGCTCATCGAGGAATTGTG CAAATTAAAAATCCAATAA
AA sequence Show only first row Show all	>Potri.010G137000.1 pacid=42799572 polypeptide=Potri.010G137000.1.p locus=Potri.010G137000 ID=Potri.010G137000.1.v4.1 annot-version=v4.1 MTTTTTTKQPPHVLVFPYPALGHTLPLLDLTHQLSLHNLTITILTTPKNLPTVSPLLSTHPQIHTLVLPFPSHPLIPAGVENVKELGNSGNLAIIAASTK LSEPITLWFKSHTNPPVAIISDFFLGWTQHLAQHLNIRGFAFYPSAAFFAGILNYCWGNLESVKVLDVVDFVDLPRSPSFKEEHLPSVFRKYRESDPDCQ LVKDSLVANKLSYGFIFNSFESLEGEYLGFLKREFGHERVYAVGPINLLGPESTDRGNPVTDSSGNVFKWLDGCPDESVLYVCFGSQKLLNKKQMEALAD GLEKSMVRFIWVVKTGTAQQVEDGYGVVPDGFDERLAGRGLVIRGWAPQVKILSHRAVGWFLSHCGWNSMLEGIVAGAMILAWPMEADQFIDARLLVEEL GAGVGACEGTATVPDSEELAKVIGESMSEKGAGVKMKAKELRRKALEAVKEGGSSLNDLNGLIEELCKLKIQ

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G03490			UDP-Glycosyltransferase superf...		Potri.010G137000 [exp]	0	1	ADGT.4
AT1G74920		ALDH10A8	aldehyde dehydrogenase 10A8 (....		Potri.015G070600 [exp]	77.22	0.7676	ALDH10.2
AT2G15480		UGT73B5	UDP-glucosyl transferase 73B5 ...		Potri.001G303300 [exp]	245.79	0.7502

Compare expression of checked genes

Potri.010G137000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.