Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G17360 642 / 0 POK1 phragmoplast orienting kinesin 1 (.1) AT3G19050 281 / 5e-76 POK2 phragmoplast orienting kinesin 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G145800 [exp] 369 / 4e-104 AT3G19050 1765 / 0.0 phragmoplast orienting kinesin 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017113 [exp] 756 / 0 AT3G17360 1085 / 0.0 phragmoplast orienting kinesin 1 (.1) Lus10018341 [exp] 735 / 0 AT3G19050 1074 / 0.0 phragmoplast orienting kinesin 2 (.1) Lus10027933 [exp] 352 / 1e-102 AT3G19050 643 / 0.0 phragmoplast orienting kinesin 2 (.1) Lus10012048 [exp] 347 / 1e-96 AT3G19050 1758 / 0.0 phragmoplast orienting kinesin 2 (.1) Lus10027934 [exp] 124 / 4e-28 AT3G19050 1521 / 0.0 phragmoplast orienting kinesin 2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.010G153000.2 pacid=42797660 polypeptide=Potri.010G153000.2.p locus=Potri.010G153000 ID=Potri.010G153000.2.v4.1 annot-version=v4.1 ATGGAAGCTAGACTGTTAATTCAGGCAATGGAATCTGAGCAGGTTCGTCTAATTGAAGAGCTGCAGCTCATGCAGGAGCATAACAACATGTACATTGAAA TCTTAAAGAAGAAGGACAACAAAGTAAGAGAACCTGTGCTTGAATCTGGAAGTAACTGTCTAGAGTTGCACAATCTAAAAGAGCAGAATGAAGTTCTGGT AATGGAGGGGAGCAGAGAGATCAAGAGCAATCCTTCGCAAGCCAAGCTGGACAAACTGAATAAGGACCTCGAGGAGGCCAGATCACTCAATTACCATTAT CAAGAAGATCAGGCATCAAAATTATATCAACAGCATCAAGCTGAATTAGTTTGTGAAGAAGTTGAGACAGAGACCACCAGAACAATTCTTCATTTACAGG AGGAGATTACTGCTCTTCAATTGGAGCTTGATGAGAGATTATACTGCATGACTCAAGAAAACACGGGACTAAGAAACACGGTTGCTGCTAAAGAGGCGGA GATAAGGGCACTTTGTGGGGAGTGGGAAAGGGCAACCTTAGAACTAACAAGCTTTCTTACAGAAGGTTCTAAATCTCTCAAAGACGCTTCTGGTCAGATT GAAAGTATTGCCAATGCATTTCCTAAATTAAATGTTTGGATCGGTGAACATGCTGAGAGGGCTGCCAGAGCTTGCGTTGACAAGGAGGAAACAATCTTAC AGCTAGAGAAAAGCCTGGAAGACGCGCGCAAGATGGTAATGGATATGGAGATGAAGTTAAATTCCCTGAGAGAGGCAACAATGGCTTTGAATGATTTTCC ACAATCAGATAATAATGAAAGCTCAGAAGAGACAATCCACTCAACCATGCAATTGAATGAGAAGATCAATATGGTAAAGATGTTAGAGAGTGAAATCAAG TTGAAGGAGATTCACATTAATGAAGCAGAAAAACGTGCCGATGCTGCTTTCTTGGTTGTAAAATGGCTATCTGAGTGCCACAAGGTTGCTCACAGTGATG ATGTCAGGAGGCGCATTCCCATCTCAAAGCTTCTTTCTTCCACTAATATGGGCTATCATAATACTTTTGATGAGAAGGTTGATGCATGGTCAGATAACGA TGCACCAACTGGGTGGGAAAATTTAATTTTGGAGTCTGAAAATGCTATTACTGCTTCCTACAAGGATGTAGAAGTGCATATAGCTGCGCTTCAAGCAGAG GTTCTTGCAGCTTTCGCTTCATACAGGGACTTGGTTCAGGATCTGGTGAAAGAAATTCATGAGATGAAGGGTAAAATTATGGAATTAAAAGAAAGGCAGA TGGACTTTCAGTCTTCTACCATGAATTGGAAAGCACGGGAACCGCTTGAATTTTTGAAGTTTGATAACCAGTTGCGCATTTTGCAACTAATAAGAGTTGA ACTAGCTAAGATCAATGATAGAATGGAAATTGTTTCTGATTTTGTTGACAAAAAAATAAGCTCACACAACTGCCTATTAAACAAAGAAGATTTTGTGGAA GCAGATGGCTGGAGCACTGATAGTTCTGCATCGTGTTATTCCATGATAGGCTCTGATCTTTTCCCTGAAAGTGTTTCTCTAGGAAACAAATTGGATGGAA AATCACATGGTTGCTGCTCTAAACTTTCTAGGAAGATAACTGAACAAATGGACCTGGAGTCTCGAAAAGGATCGGATGTCCAATCTGAATCAGAAGATTT TCAGTCTGGATCAGAAAACTCAGAGAAGCTTTTGAAAATTCCACATTCCAATCGAACAATGACATTAGAGATGAAAAGGGAGCTGGATTTGACATTTGAT GCATTCAGCAAAATCTATGTTCATTTAAGCACAATTTTCAATGAGGATGATTTGATGCATTGCACTTGCCCAGAAGATATCAAGGAATCATTTCCATCTC TTGGTTCAAGGATGAAGATCGCTGAAGCATTCTGCCATAGTACTGGAAAGGTATTTGCAGATGATAAAGTCAGTCATGCTAGTATCTTCTTAAGAAAATG CGAGGAAGCCAATGCAACCATGAAAGAAGCTGATTATATGTTGAATGCATTGATGGGAGCAAATGAAAATGCAAAACAATTGAGTGATATGTGGAAGCAA GCCAATGAAGAACTGATGGTAGACAGGTCACGCTTGGTTGAAGAAAACGGACAGCTCAAGTCTTCATTATGTTTGAAAGAAGAAGAAAACAAATTACTGC TGGATGAAAACAGTCATGGTTTGGCAGAAGTAGCAAATTCTGTGTCTTTGCTTGAAGCATGTTTTCAGCAAATGCAAAGGGAAGAAGAGGAAAGGTACAA GGTCATTTATTCAGATGTCTTATCTATGGTAAGAGAGATGCTTTCCTTCATTTGCAATTCAAGATCATCGGTGGAAGATATTTTCTCTGAGATAATGGAG AAGGGATTTGCTCGCAGCATCATGTACCATTGCCTTGTAGGAGAGCTTGTCCACAAAATTCCAAGCTTCATCGCACAACCAGGTTTCAGTTCATTCAACC AACAAGAACGCCACATGGTAATGGATACTTCACAAAGAGTTTGCTCGACTGGTCACACTGAAAGCATTGTCACTAATGAGCAGGGAAATGAGGAACAGCG TCTAAGAGACTCTTTCACAACTTTGGAGGAAGGGGAGGGGCCATCACATGATAAACTGACGTACGAGAATTTGTCTCTTAAGAAAGAATTGGAAAGGAAA GAAAGTCTACTGAAGGGCTTGCTTTTTGATTTTAGTTTGCTGCAAGAGACATCCTCCAATCGAACAGACTTCAAAGATGAAACGGAAAAGTTAATTTTTG CTTTGAGTGAAGTTCAACATGAGCTAGAGAAGAAAACAAGTCAGATTGATGACCTGTTGGTTCAGCATAGAAAAGTTGAAGGCCATCTTACGGATACCGA AAATGCTTTATTGGTATCGATATCTGATCTTGCACAAGCCAAGGAAACAATAGATGCCTTGTCAGACGAAAATGCTGAGTTGAGAATGCTTCTTAAAGAT ATATATCTTAAAAAATCTGAAGCCGAAGAACAATTGGAAGAACAGAAAGAGGTGACTAAAAGCTTGGAAGACGAAATTATTCACTTGAGTTCTTCTACCG AAAGTAAATTGCGCTCTGCAGTTGAAAGCCTCGAGGACGAGTTAGAAAAGATCAGAAATGAGAGAGACCAACTCCGCGAAGAAATCCGCTCCTTCAATGA TAAGCTTGAGATGGCATATGGATTAGCTGATGAAAATGAAGCTATTGCTGTTGAAGCTCGCCAGGAGTCAGAGGCAAGTAAAATATATGCTGAACAGAAG GAAGAGGAGGTCAAAATTTTAGAACATTCTGTCGAGGAGCTTGAGAATACAATAAATGTATTGGAGAAGAAGGTGTACGAAATGAATGATGAGGTAGAAA GACATCGATTGATCAGAGACTCATTAGAATTGGAACTCCGAACTTTGAGGCAGAGATTGTCAACAGTTGAAAACATCACCGACATTGCAGATTCTGAAAA TGCAAATTCTGTACAAAAAGAAGATTCTATAACTAGGCAACTGCACAATAGATTACTGGAGCTTCATGGGGCTTATAATCGGATAAGACTTCTAGAGAGG GACATTACAGAAAAAGATAAAGAGATCAAACAATGCAAAGAGTACATCTCCGAACTTGTACTACATTCTGAAGCTCAGGCATCACAGTTTCAAGAGAAGT ATAAGACTTTGGAAACCATGGTTCGTGAAGTAAAAACATATTCGTTGGACTCAGAATCAGCTCTACAAGTGGTAGAAAAAAGTGAAAAAAGCTCAATCAG AACTAGGGGTTCTAGTTCACCGTTCAGATGCATTGCGGGTTTGGTTCAGCAGATGAATTTGGAGAAGGATCAAGAACTGTCGGTGGCAAGGCTTCGTATA GAAGAGCTAGAAGCAGTGCTTTCTAGTCGGAAAAAGGAGGTATGCGCACTAAATGCTAGACTGGCTGCAGCAGAAAGCATGACACATGATGTCATTCGAG ATTTACTAGGTGTTAAGTTGGATATGACCAACTACGCAAACCTGATTGATCAGCACCAGGTTCAAAAATTAGTAGAGGATGCTCATCAGCAGACAGAAGA ATTCCTTGCAAGGGAGCAAGAAATCCTGAACTTAAGAAAACAGATAAATGATCTCGCTGAAGAAAGAGAGAGTTGTATAGCTGAAATAAATGTTAAAGTA GCAGATATGCTTGCCGCCCAGATGGCTGTAGAGCAACTTAAAGAGCGAGATCAGTTGCTTTCAGCGCAGAATGAAATGTTGAAGGTGGACAAAAGTAATC TACTTAGAAGAGTTGCAGATCTGGATGAAATGGTGAAAACTCTTCTTGGAACTCAAATTACCCAACAGCGAGTTCCACCGACATCCAGTGCCAAGGAGAA ACGTGTATTGAAATTGGGTGGTGCTGATTTAACCAAGAGGCTTGCGCATTCTGAAAAGCTTTTGTCTCGTGTGAACAATGAACTTGCTCAGTATCGCAGC AGACCTGATGCTAGTCATCCATATGTCAGGACTAATGGGCAGGGCTTAGAACTAAACAACAGGAAGGACAAGGCTTAA
AA sequence Show only first row Show all	>Potri.010G153000.2 pacid=42797660 polypeptide=Potri.010G153000.2.p locus=Potri.010G153000 ID=Potri.010G153000.2.v4.1 annot-version=v4.1 MEARLLIQAMESEQVRLIEELQLMQEHNNMYIEILKKKDNKVREPVLESGSNCLELHNLKEQNEVLVMEGSREIKSNPSQAKLDKLNKDLEEARSLNYHY QEDQASKLYQQHQAELVCEEVETETTRTILHLQEEITALQLELDERLYCMTQENTGLRNTVAAKEAEIRALCGEWERATLELTSFLTEGSKSLKDASGQI ESIANAFPKLNVWIGEHAERAARACVDKEETILQLEKSLEDARKMVMDMEMKLNSLREATMALNDFPQSDNNESSEETIHSTMQLNEKINMVKMLESEIK LKEIHINEAEKRADAAFLVVKWLSECHKVAHSDDVRRRIPISKLLSSTNMGYHNTFDEKVDAWSDNDAPTGWENLILESENAITASYKDVEVHIAALQAE VLAAFASYRDLVQDLVKEIHEMKGKIMELKERQMDFQSSTMNWKAREPLEFLKFDNQLRILQLIRVELAKINDRMEIVSDFVDKKISSHNCLLNKEDFVE ADGWSTDSSASCYSMIGSDLFPESVSLGNKLDGKSHGCCSKLSRKITEQMDLESRKGSDVQSESEDFQSGSENSEKLLKIPHSNRTMTLEMKRELDLTFD AFSKIYVHLSTIFNEDDLMHCTCPEDIKESFPSLGSRMKIAEAFCHSTGKVFADDKVSHASIFLRKCEEANATMKEADYMLNALMGANENAKQLSDMWKQ ANEELMVDRSRLVEENGQLKSSLCLKEEENKLLLDENSHGLAEVANSVSLLEACFQQMQREEEERYKVIYSDVLSMVREMLSFICNSRSSVEDIFSEIME KGFARSIMYHCLVGELVHKIPSFIAQPGFSSFNQQERHMVMDTSQRVCSTGHTESIVTNEQGNEEQRLRDSFTTLEEGEGPSHDKLTYENLSLKKELERK ESLLKGLLFDFSLLQETSSNRTDFKDETEKLIFALSEVQHELEKKTSQIDDLLVQHRKVEGHLTDTENALLVSISDLAQAKETIDALSDENAELRMLLKD IYLKKSEAEEQLEEQKEVTKSLEDEIIHLSSSTESKLRSAVESLEDELEKIRNERDQLREEIRSFNDKLEMAYGLADENEAIAVEARQESEASKIYAEQK EEEVKILEHSVEELENTINVLEKKVYEMNDEVERHRLIRDSLELELRTLRQRLSTVENITDIADSENANSVQKEDSITRQLHNRLLELHGAYNRIRLLER DITEKDKEIKQCKEYISELVLHSEAQASQFQEKYKTLETMVREVKTYSLDSESALQVVEKSEKSSIRTRGSSSPFRCIAGLVQQMNLEKDQELSVARLRI EELEAVLSSRKKEVCALNARLAAAESMTHDVIRDLLGVKLDMTNYANLIDQHQVQKLVEDAHQQTEEFLAREQEILNLRKQINDLAEERESCIAEINVKV ADMLAAQMAVEQLKERDQLLSAQNEMLKVDKSNLLRRVADLDEMVKTLLGTQITQQRVPPTSSAKEKRVLKLGGADLTKRLAHSEKLLSRVNNELAQYRS RPDASHPYVRTNGQGLELNNRKDKA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G17360		POK1	phragmoplast orienting kinesin...		Potri.010G153000 [exp]	0	1
AT3G44050			P-loop containing nucleoside t...		Potri.004G193700 [exp]	2.44	0.9630
AT5G56120			unknown protein		Potri.001G470800 [exp]	2.82	0.9622
AT1G18370		HIK, ATNACK1	HINKEL, ARABIDOPSIS NPK1-ACTIV...		Potri.012G054400 [exp]	6.70	0.9604
AT4G33270		AtCDC20.1, CDC2...	cell division cycle 20.1, Tran...		Potri.013G048900 [exp]	7.07	0.9552	Pt-CDC20.4
AT5G60930			P-loop containing nucleoside t...		Potri.002G106000 [exp]	7.21	0.9566
AT3G19050		POK2	phragmoplast orienting kinesin...		Potri.004G145800 [exp]	8.48	0.9500
AT4G33270		AtCDC20.1, CDC2...	cell division cycle 20.1, Tran...		Potri.019G021800 [exp]	9.53	0.9448	Pt-CDC20.3
AT3G44050			P-loop containing nucleoside t...		Potri.009G156000 [exp]	11.40	0.9494
AT1G03780		AtTPX2, TPX2	targeting protein for XKLP2 (....		Potri.017G013100 [exp]	11.74	0.9522
AT5G13840		FZR3	FIZZY-related 3 (.1.2)		Potri.010G202100 [exp]	12.96	0.9510

Compare expression of checked genes

Potri.010G153000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.