Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	EIN3C,CMEIL2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G20770 578 / 0 EIL AtEIN3, EIN3 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) AT2G27050 545 / 0 EIL AtEIL1, EIL1 ETHYLENE-INSENSITIVE3-like 1 (.1) AT1G73730 347 / 1e-111 EIL AtEIL3, ATSLIM, SLIM1, EIL3 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) AT5G65100 322 / 3e-102 EIL Ethylene insensitive 3 family protein (.1) AT5G10120 309 / 5e-98 EIL Ethylene insensitive 3 family protein (.1) AT5G21120 308 / 4e-97 EIL EIL2 ETHYLENE-INSENSITIVE3-like 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G011300 [exp] 1102 / 0 AT3G20770 560 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.009G159200 [exp] 677 / 0 AT3G20770 704 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.004G197400 [exp] 649 / 0 AT3G20770 724 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.001G015900 [exp] 368 / 3e-119 AT1G73730 494 / 8e-170 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Potri.003G210500 [exp] 354 / 5e-114 AT1G73730 516 / 5e-178 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Potri.001G015966 [exp] 156 / 1e-43 AT1G73730 239 / 6e-76 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031817 [exp] 359 / 6e-116 AT1G73730 555 / 0.0 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Lus10031245 [exp] 358 / 1e-115 AT1G73730 556 / 0.0 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Lus10014331 [exp] 298 / 1e-93 AT5G65100 351 / 1e-116 Ethylene insensitive 3 family protein (.1) Lus10041709 [exp] 281 / 5e-87 AT5G65100 358 / 6e-119 Ethylene insensitive 3 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04873 [poplar] [flax] EIN3 Ethylene insensitive 3
Representative CDS sequence Show only first row Show all	>Potri.010G247500.9 pacid=42799779 polypeptide=Potri.010G247500.9.p locus=Potri.010G247500 ID=Potri.010G247500.9.v4.1 annot-version=v4.1 ATGGGAATCTTTGAAGAAATGGGATTTTGCAACAATCTGGACTTTTTCTCGGCTCCTCCTGGAGAAATGGATGCGGTTCCAGAGCGCGAACCGGGGGCAA CAATCGAGGAGGATTACAGCGATGAAGAGATGGATGTGGATGAGCTTGAGAGGAGGATGTGGAGAGACAGAATGTTGCTTAGGCGACTTAAAGAGCAGGG TAAGAATACGGAAGTTGTTGATCATGCAAAACATCGTCAGTCCCAGGAGCAAGCACGGAGGAAGAAGATGTCACGAGCACAAGATGGTATCCTGAAATAT ATGCTGAAAATGATGGAAGTTTGCAAAGCTCAGGGTTTTGTGTATGGGATCATTCCTGAGAAGGGAAAGCCGGTGAGTGGAGCATCTGACAATCTCCGGG GATGGTGGAAGGAAAAAGTCAGGTTTGATCGGAATGGCCCTGCTGCTATCTCCAAGTATCAGGCAGACCATTCAATCCCTGGAAAGAGTGAAGATTGTGG TCCAGCAGCATCCACACCTCACACCTTGCAGGAACTTCAGGATACAACTCTTGGATCGCTTCTGTCAGCCCTGATGCAGCACTGTGATCCACCCCAGAGG CGTTTCCCACTGGAGAAAGGTGTTGCCCCCCCATGGTGGCCCACTGCGAACGAGGAATGGTGGCCTCAACTGGGTTTGCCCAAGGATCAGGGTCCTCCTC CATACAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTCAGTGTTCTGACAGCAGTGATTAAGCACATTTCTCCTGATATTGCCAAGATTCGCAAGCT TGTTCGCCAGTCTAAATGTTTGCAGGATAAGATGACTGCCAAGGAGAGTGCCACTTGGCTGGCAATAATTAATCAGGAAGAAACACTGTCCCGGAAATTA TATCCAGATAGCTGCCCTCCTGTGTCTGCTGGTGGAAGTGGTTCGTGTGTCATCAGCGATTCCAGTGATTATGATGTTGAAGGAGTGGATGATGAACCCA ATGTTGAAGTAGAGGATTGTAAGCGTCTTGATGTCAGTCTTTTCAACATGGCAACGGCAGCTGGACCAAGTGATAGATTTATGATGCCGCCAGCAGCTCC ACAAATTAAGGGAGAGCTTGTTGAAACAAGCATGGATTTCATTCAGAAAAGGAAGCAGCCTGCTGGCGAGCCACACATGTTGGTTGATCAAAAGGTGTAT AGGTGCGAGCATCCTCAATGCCCCTACAACGATTCCGGACTTGGGTTTCTTGACATCACTGCAAGAAATAATCACCAAATGAATTGCCCATACCGCACCA ACACTTCTCAGGGACTTGGATTGTCTAATTTCCAAATTAACAATGACAAACCAGCTGTGTTTTCTCTCCCATTTCCCCAAACTAAGGCAGCAGCTCCAAA CCAGACTCCTTCATTTAATGTTTCAGGACTTAGACTTTCAGAAGATGGGCAAAAAACGATTTCTGATCTTATGTCTTTCTATGATACCAATCTTCAGCGA GACAAGAACATAAATCCTGGGAGTGCCAATGTTATTGGAGATCAAAATCAGCAGCAACTGCAAGAGCAGAAATTTCAATTTCAGCTGAACCCCAGGAATG TGAATTTTATGGGGGACCAAAATCCACAGCAGCAACAGAAATTCCAGTTTCAGCTGGATCATAGGAATGCTAATATTATTGGTGGTCAAAATCAACAGCA ACAACAGAAATTCCAATTTCAGCTGGATGATAGCTTCTATGGCCAAGGGGCTATGGTGGGAAACAACATCACTGAAGCAACCAGCATGCCAGTGAACAAT CCTGTTTTCTCATCAACTGAAAATCAGTTTGATCACTGCAAGGCATTTGATTCTGCATTTGATACCAATGTCAATGACAATATTACTGACTTCAGATTTG GCTCTCCGTTCCCCAGTCCACCAGTTGATTATTCCATGGATCTGATTCAAAAGCAGGATGTTGGCATGTGGTATGTCTAA
AA sequence Show only first row Show all	>Potri.010G247500.9 pacid=42799779 polypeptide=Potri.010G247500.9.p locus=Potri.010G247500 ID=Potri.010G247500.9.v4.1 annot-version=v4.1 MGIFEEMGFCNNLDFFSAPPGEMDAVPEREPGATIEEDYSDEEMDVDELERRMWRDRMLLRRLKEQGKNTEVVDHAKHRQSQEQARRKKMSRAQDGILKY MLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRGWWKEKVRFDRNGPAAISKYQADHSIPGKSEDCGPAASTPHTLQELQDTTLGSLLSALMQHCDPPQR RFPLEKGVAPPWWPTANEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEETLSRKL YPDSCPPVSAGGSGSCVISDSSDYDVEGVDDEPNVEVEDCKRLDVSLFNMATAAGPSDRFMMPPAAPQIKGELVETSMDFIQKRKQPAGEPHMLVDQKVY RCEHPQCPYNDSGLGFLDITARNNHQMNCPYRTNTSQGLGLSNFQINNDKPAVFSLPFPQTKAAAPNQTPSFNVSGLRLSEDGQKTISDLMSFYDTNLQR DKNINPGSANVIGDQNQQQLQEQKFQFQLNPRNVNFMGDQNPQQQQKFQFQLDHRNANIIGGQNQQQQQKFQFQLDDSFYGQGAMVGNNITEATSMPVNN PVFSSTENQFDHCKAFDSAFDTNVNDNITDFRFGSPFPSPPVDYSMDLIQKQDVGMWYV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G20770	EIL	AtEIN3, EIN3	ETHYLENE-INSENSITIVE3, Ethylen...		Potri.010G247500 [exp]	0	1	EIN3C,CMEIL2.1
AT2G25490		FBL6, EBF1	EIN3-binding F box protein 1 (...		Potri.018G130800 [exp]	1.73	0.7407
AT2G40940		ERS1	ethylene response sensor 1 (.1...		Potri.002G201500 [exp]	2.44	0.7277	ERS1.1,ETR1
AT2G29060	GRAS		GRAS family transcription fact...		Potri.001G242000 [exp]	11.31	0.6930
AT2G16485			nucleic acid binding;zinc ion ...		Potri.007G016000 [exp]	14.07	0.6930
AT3G61440		ATCYSC1, ARATH;...	BETA-SUBSTITUTED ALA SYNTHASE ...		Potri.014G086300 [exp]	14.38	0.6322
AT3G16770	AP2_ERF	RAP2.03, ATEBP,...	RELATED TO AP2 3, ETHYLENE RES...		Potri.010G006800 [exp]	16.27	0.6824	RAP2.3,ERF34
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)		Potri.002G129300 [exp]	18.33	0.6499	ADR1.1
AT4G18220			Drug/metabolite transporter su...		Potri.001G352200 [exp]	18.49	0.6146
AT3G23240	AP2_ERF	ERF1, ATERF1	ethylene response factor 1 (.1...		Potri.010G072300 [exp]	19.39	0.6476	Pt-ERF1.2,ERF33
AT2G25490		FBL6, EBF1	EIN3-binding F box protein 1 (...		Potri.006G068500 [exp]	21.90	0.5859

Compare expression of checked genes

Potri.010G247500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.