Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ACA9.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G21180 1575 / 0 ATACA9, ACA9 autoinhibited Ca\(2+\)-ATPase 9, autoinhibited Ca(2+)-ATPase 9 (.1) AT4G29900 1426 / 0 CIF1, ATACA10, ACA10 COMPACT INFLORESCENCE 1, autoinhibited Ca\(2+\)-ATPase 10, autoinhibited Ca(2+)-ATPase 10 (.1) AT5G57110 1406 / 0 AT-ACA8, ACA8 "AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8", "autoinhibited Ca2+ -ATPase, isoform 8", autoinhibited Ca2+ -ATPase, isoform 8 (.1), autoinhibited Ca2+ -ATPase, isoform 8 (.2) AT3G63380 932 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT3G22910 891 / 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) AT3G57330 857 / 0 ACA11 autoinhibited Ca2+-ATPase 11, autoinhibited Ca2+-ATPase 11 (.1) AT2G41560 827 / 0 ACA4 "autoinhibited Ca\(2+\)-ATPase, isoform 4", autoinhibited Ca(2+)-ATPase, isoform 4 (.1) AT4G37640 825 / 0 ACA2 calcium ATPase 2 (.1) AT1G27770 820 / 0 PEA1, ACA1 PLASTID ENVELOPE ATPASE 1, autoinhibited Ca2+-ATPase 1, autoinhibited Ca2+-ATPase 1 (.1), autoinhibited Ca2+-ATPase 1 (.2) AT2G22950 816 / 0 ACA7 auto-regulated Ca2+-ATPase 7, Cation transporter/ E1-E2 ATPase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G008100 [exp] 1860 / 0 AT3G21180 1562 / 0.0 autoinhibited Ca\(2+\)-ATPase 9, autoinhibited Ca(2+)-ATPase 9 (.1) Potri.006G072900 [exp] 1528 / 0 AT4G29900 1549 / 0.0 COMPACT INFLORESCENCE 1, autoinhibited Ca\(2+\)-ATPase 10, autoinhibited Ca(2+)-ATPase 10 (.1) Potri.018G139800 [exp] 1488 / 0 AT4G29900 1566 / 0.0 COMPACT INFLORESCENCE 1, autoinhibited Ca\(2+\)-ATPase 10, autoinhibited Ca(2+)-ATPase 10 (.1) Potri.018G139900 [exp] 1204 / 0 AT5G57110 1210 / 0.0 "AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8", "autoinhibited Ca2+ -ATPase, isoform 8", autoinhibited Ca2+ -ATPase, isoform 8 (.1), autoinhibited Ca2+ -ATPase, isoform 8 (.2) Potri.005G215600 [exp] 982 / 0 AT3G63380 1461 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.008G159100 [exp] 976 / 0 AT3G22910 1340 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.002G047500 [exp] 968 / 0 AT3G63380 1411 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.010G081100 [exp] 946 / 0 AT3G22910 1337 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1) Potri.005G052700 [exp] 945 / 0 AT3G63380 1233 / 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034840 [exp] 1607 / 0 AT3G21180 1647 / 0.0 autoinhibited Ca\(2+\)-ATPase 9, autoinhibited Ca(2+)-ATPase 9 (.1) Lus10033386 [exp] 1606 / 0 AT3G21180 1615 / 0.0 autoinhibited Ca\(2+\)-ATPase 9, autoinhibited Ca(2+)-ATPase 9 (.1) Lus10001638 [exp] 1487 / 0 AT4G29900 1599 / 0.0 COMPACT INFLORESCENCE 1, autoinhibited Ca\(2+\)-ATPase 10, autoinhibited Ca(2+)-ATPase 10 (.1) Lus10001428 [exp] 1484 / 0 AT4G29900 1593 / 0.0 COMPACT INFLORESCENCE 1, autoinhibited Ca\(2+\)-ATPase 10, autoinhibited Ca(2+)-ATPase 10 (.1) Lus10018687 [exp] 831 / 0 AT1G27770 1667 / 0.0 PLASTID ENVELOPE ATPASE 1, autoinhibited Ca2+-ATPase 1, autoinhibited Ca2+-ATPase 1 (.1), autoinhibited Ca2+-ATPase 1 (.2) Lus10011522 [exp] 824 / 0 AT4G37640 1704 / 0.0 calcium ATPase 2 (.1) Lus10016366 [exp] 824 / 0 AT2G41560 1463 / 0.0 "autoinhibited Ca\(2+\)-ATPase, isoform 4", autoinhibited Ca(2+)-ATPase, isoform 4 (.1) Lus10042040 [exp] 818 / 0 AT3G57330 1542 / 0.0 autoinhibited Ca2+-ATPase 11, autoinhibited Ca2+-ATPase 11 (.1) Lus10035439 [exp] 799 / 0 AT2G41560 1535 / 0.0 "autoinhibited Ca\(2+\)-ATPase, isoform 4", autoinhibited Ca(2+)-ATPase, isoform 4 (.1) Lus10025199 [exp] 793 / 0 AT4G37640 1591 / 0.0 calcium ATPase 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00122 [poplar] [flax] E1-E2_ATPase E1-E2 ATPase PF00689 [poplar] [flax] Cation_ATPase_C Cation transporting ATPase, C-terminus PF00690 [poplar] [flax] Cation_ATPase_N Cation transporter/ATPase, N-terminus CL0137 [poplar] [flax] HAD PF00702 [poplar] [flax] Hydrolase haloacid dehalogenase-like hydrolase CL0137 [poplar] [flax] PF12515 [poplar] [flax] CaATP_NAI Ca2+-ATPase N terminal autoinhibitory domain
Representative CDS sequence Show only first row Show all	>Potri.010G250800.2 pacid=42797610 polypeptide=Potri.010G250800.2.p locus=Potri.010G250800 ID=Potri.010G250800.2.v4.1 annot-version=v4.1 ATGAGTAGCAGTTGTTCGTCTAATGGATTGTTGCCTTCTTCAGCATCCCCCAGGGAACAGGATGACTTGGAGGCGAGACCTACTAAGGAGTTTGAACATG ATGATCATGATTTGATTGATGAATCTGATCCTTTTGATATTGCTCAGACCAAGAACGCTCCTATCGAGATTCTTCGCCAATGGAGGCAAGCAGCGTTTGT GTTGAATGCTTGCCGGCGTTTTCGGTACACCTTGGACTTGAAAAGAGAAGACGAGAAAGAGAAAAGAAGAAGGATGATCAGATCCCATGCACAAGTCGTA AGGGCGGCATTACTCTTTCGGTTGGCAGGGGAACAGCAAATTGTGCTGGGTCCCTCAGCTACACCTCCAACTGCTACTGGTGATTATGCAATTGAACTGG AGCAGCTTGCTTCAATGACCAGGGATCATAATTTTTCTTCTCTGCAACAATATGGCGGTGCCAAAGGGTTGTCAAATATGCTGAAAACCAATCTTGTGAC TGGTATTACTGGAGATGAGAATGATCTGATAAAGCGTAGGAATGCATTTGGAACAAATAGATATCCTCAGAAAAAAGGACGCAGTTTTTTGAGATTCCTG TGGGAAGCTTGGCAAGATTTAACCCTCATCATTTTGATTGTAGCTGCCATTGCATCATTGGGACTGGGAATCAAGACAGAGGGTTTGTCACATGGATGGT ATGATGGGGCTAGCATCTCTTTTGCTGTTATTCTTGTCATAATTGTTACAGCTGTTAGCGATTACCGTCAATCTCTGCAGTTTCAAAATTTAAATCAGGA AAAGCAGAACATACAGTTAGAGGTTATGAGGGGTGGAAGAACGATGAAAATGTCAATATTTGATATTGTTGTTGGTGATGTTGTACCTCTTAAAATAGGT GATCAGGTTCCAGCTGATGGACTCTTGATTACCGGCCATTCTCTTGCCATAGATGAATCTAGCATGACTGGTGAAAGCAAGATTGTTCACAAGAATCAGA AGGCTCCCTTTTTGATGTCTGGTTGTAAAGTAGCAGATGGTTTCGGCACTATGCTGGTAACTGGTGTTGGGATCAATACTGAATGGGGGTTGTTGATGGC AAGCGTCTCAGAGGATACTGGTGAAGAGACTCCCTTGCAGGTACGATTGAATGGACTTGCAACTTTTATTGGCATTGTTGGGCTTGCTGTAGCTCTTTCT GTGCTTGCTGTCCTTTTGGGCCGATACTTTACTGGAAATACAAAAAATCCAGATGGAAGTGTCCAGTTTATCAAAGGAGAGACAAAGGTCAGCAAAGCAA TAGACGGAGTGATAAAGATCCTTACCGTTGCAGTTACAATTGTGGTTGTTGCTGTTCCCGAGGGACTTCCATTGGCTGTTACCTTGACTCTGGCATATTC AATGCGGAAAATGATGGCAGATAAAGCCTTGGTTCGTAGGCTTTCAGCATGTGAAACTATGGGCTCTTCAACAACAATTTGCAGTGATAAGACTGGAACA TTGACATTAAATCAGATGACTGTAGTTGAGGCTTACATTGGGAAACAGAAGATAAACCCTCCAGATAACCCCTTAAAATTGCACTCAGAAGTTAGCTCTT TGTTGTGTGAGGGTATTGCACAGAACACCACCGGCAATGTGTTTGTTCCCAAGGATGGTGGAGATGTAGAGATTTCTGGATCTCCAACTGAAAAAGCTAT CCTCTCTTGGGCAGTCAAGTTGGGGATGAAGTTTGATGCTCTTAGATCAGAGTCCAAAATCCTGCATGTTTTCCCTTTCAATTCTGAGAAAAAGCAAGGT GGTGTTGCTGTACAAACGACTGATTCTAAAGTTCACATACATTGGAAAGGAGCAGCTGAGATGGTTCTTGCCTCTTGTACCAGATATCTTGATTCAAATG GTTCACTGCAATCCATTGATAAAGATATGGATTTTTTCAAGGCCTCTATTGATGACATGGCTGCCTGCAGCTTGCGCTGTGTTGCTATTGCATATAGACC ATATGATTTGGACAAAGTTCCTACTGATGTAGAGAGCTTGGACAAATGGGTTTTGCCTGAAGATGAACTTGTTTTGCTTGCTATTGTCGGCATTAAGGAT CCTTGCCGCCCAGGTGTAAAAGATGCAGTTAGAGTATGCACAGCAGCTGGTGTAAAGGTACGAATGGTTACTGGAGACAATATTCAGACAGCAAAAGCAA TAGCTTTGGAGTGTGGGATTCTCAGTTCTGGTGCTGATGCTACAGAGCCTAATATCATTGAAGGAAAAGTATTCCGTGCATATTCAGAAAAAGAAAGAGA AATAATTGCCAAGAAAATAACGGTGATGGGGAGGTCATCTCCCAATGACAAGCTTTTACTTGTGCAAGCCCTTCGTAAGGGAGGGGAAGTTGTAGCTGTG ACCGGAGATGGCACAAATGATGCTCCCGCACTTCATGAGGCTGATATAGGCCTTTCTATGGGCATTCAAGGGACTGAAGTTGCAAAAGAGAGCTCGGATA TTGTTATCTTGGATGATAATTTTGCTTCAGTTGTAAAGGTTGTTCGTTGGGGGCGTTCTGTGTATGCCAACATTCAGAAATTTATCCAATTCCAGCTTAC TGTTAATGTTGGAGCTTTAGTGATCAATGTTGTTGCTGCGGTCTCTTCTGGTGATGTTCCTCTAAATACAGTGCAGCTTCTATGGGTCAATCTTATCATG GACACTCTCGGGGCACTTGCATTGGCTACAGAACCACCAACAGATCACCTTATGCATAGGACACCAGTTGGTCGAAGGGAACCTCTCATAACAAACATCA TGTGGAGGAACTTGCTCGTACAGGCTCTATATCAAGTTGCTGTTCTCCTTGTGCTCAACTTCCGGGGCTTGAGCATTCTCAATTTGAATCAGGACGACAG GAAACATGCTACAATTGTGAAGAATACAATGATATTCAATGCATTTGTTCTCTGTCAAGTTTTCAATGAGTTCAATGCTCGAAAGCCAGATCAAATAAAT GTCTTTAAAGGAGTAACAAAAAACCGCTTGTTTATGGGAATAGTTGGATTCACCGTCATCCTTCAGATAATCCTCATTGAATTCACTGGAGACTTTACCA CAACTGTGAGACTTAATTGGAAACAATGGCTTATATGCGTTGCCATTGGCATTGTCAGCTGGCCTCTTGCTGCGGTTGGAAAACTCCTTCCAGTACCAAA GACTCCACTATCCAAGCACTTTAGAAAGCCATTTCGACGATCAAGAACTGCTCGGAATGCATAG
AA sequence Show only first row Show all	>Potri.010G250800.2 pacid=42797610 polypeptide=Potri.010G250800.2.p locus=Potri.010G250800 ID=Potri.010G250800.2.v4.1 annot-version=v4.1 MSSSCSSNGLLPSSASPREQDDLEARPTKEFEHDDHDLIDESDPFDIAQTKNAPIEILRQWRQAAFVLNACRRFRYTLDLKREDEKEKRRRMIRSHAQVV RAALLFRLAGEQQIVLGPSATPPTATGDYAIELEQLASMTRDHNFSSLQQYGGAKGLSNMLKTNLVTGITGDENDLIKRRNAFGTNRYPQKKGRSFLRFL WEAWQDLTLIILIVAAIASLGLGIKTEGLSHGWYDGASISFAVILVIIVTAVSDYRQSLQFQNLNQEKQNIQLEVMRGGRTMKMSIFDIVVGDVVPLKIG DQVPADGLLITGHSLAIDESSMTGESKIVHKNQKAPFLMSGCKVADGFGTMLVTGVGINTEWGLLMASVSEDTGEETPLQVRLNGLATFIGIVGLAVALS VLAVLLGRYFTGNTKNPDGSVQFIKGETKVSKAIDGVIKILTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSSTTICSDKTGT LTLNQMTVVEAYIGKQKINPPDNPLKLHSEVSSLLCEGIAQNTTGNVFVPKDGGDVEISGSPTEKAILSWAVKLGMKFDALRSESKILHVFPFNSEKKQG GVAVQTTDSKVHIHWKGAAEMVLASCTRYLDSNGSLQSIDKDMDFFKASIDDMAACSLRCVAIAYRPYDLDKVPTDVESLDKWVLPEDELVLLAIVGIKD PCRPGVKDAVRVCTAAGVKVRMVTGDNIQTAKAIALECGILSSGADATEPNIIEGKVFRAYSEKEREIIAKKITVMGRSSPNDKLLLVQALRKGGEVVAV TGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVGALVINVVAAVSSGDVPLNTVQLLWVNLIM DTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQALYQVAVLLVLNFRGLSILNLNQDDRKHATIVKNTMIFNAFVLCQVFNEFNARKPDQIN VFKGVTKNRLFMGIVGFTVILQIILIEFTGDFTTTVRLNWKQWLICVAIGIVSWPLAAVGKLLPVPKTPLSKHFRKPFRRSRTARNA

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G21180		ATACA9, ACA9	autoinhibited Ca\(2+\)-ATPase ...		Potri.010G250800 [exp]	0	1	ACA9.1
AT1G18270			ketose-bisphosphate aldolase c...		Potri.015G037000 [exp]	3.16	0.8212
AT5G17680			disease resistance protein (TI...		Potri.019G070479 [exp]	6.92	0.8010
AT5G17680			disease resistance protein (TI...		Potri.019G069600 [exp]	10.58	0.7716
AT2G25737			Sulfite exporter TauE/SafE fam...		Potri.006G242100 [exp]	11.48	0.7840
AT1G06410		ATTPSA, ATTPS7	TREHALOSE -6-PHOSPHATASE SYNTH...		Potri.011G070900 [exp]	14.07	0.7459	Pt-TPS7.1
AT3G62010			unknown protein		Potri.014G109900 [exp]	16.24	0.7565
AT4G27290			S-locus lectin protein kinase ...		Potri.011G125651 [exp]	18.70	0.7583
AT3G14620		CYP72A8	"cytochrome P450, family 72, s...		Potri.011G117600 [exp]	21.16	0.6245	CYP72D1
AT5G22355			Cysteine/Histidine-rich C1 dom...		Potri.016G047300 [exp]	22.71	0.7346
AT5G17330		GAD1, GAD	GLUTAMATE DECARBOXYLASE 1, glu...		Potri.017G144421 [exp]	25.09	0.6827

Compare expression of checked genes

Potri.010G250800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.