Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G16800 1405 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G30100 306 / 2e-84 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G19120 285 / 1e-78 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G15570 220 / 7e-59 MAA3 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G65810 173 / 4e-43 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) AT5G37160 145 / 1e-34 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G65780 144 / 5e-34 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT4G05540 140 / 2e-33 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37150 137 / 3e-32 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G37030 135 / 4e-32 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G093500 [exp] 286 / 5e-78 AT4G30100 1637 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G168300 [exp] 286 / 7e-78 AT4G30100 1620 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G056700 [exp] 228 / 2e-61 AT4G15570 1058 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.008G143000 [exp] 172 / 2e-42 AT1G65810 680 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.008G143450 [exp] 168 / 3e-41 AT1G65810 694 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.008G142960 [exp] 166 / 1e-40 AT1G65810 683 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Potri.017G140601 [exp] 165 / 1e-40 AT1G65780 777 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G140501 [exp] 160 / 4e-39 AT1G65780 798 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.017G140300 [exp] 158 / 7e-39 AT1G65780 572 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035717 [exp] 2381 / 0 AT1G16800 1196 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10037303 [exp] 1607 / 0 AT1G16800 1190 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10037304 [exp] 461 / 2e-144 AT1G16800 540 / 5e-174 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10033462 [exp] 282 / 5e-77 AT4G30100 1589 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10015030 [exp] 223 / 9e-60 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10038906 [exp] 210 / 1e-55 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10003960 [exp] 206 / 4e-54 AT4G15570 938 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10035774 [exp] 153 / 6e-37 AT1G65810 541 / 7e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10037353 [exp] 149 / 1e-35 AT1G65810 543 / 2e-177 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10035776 [exp] 147 / 7e-35 AT1G65810 633 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF13087 [poplar] [flax] AAA_12 AAA domain CL0023 [poplar] [flax] P-loop_NTPase PF13245 [poplar] [flax] AAA_19 AAA domain
Representative CDS sequence Show only first row Show all	>Potri.010G253700.1 pacid=42796854 polypeptide=Potri.010G253700.1.p locus=Potri.010G253700 ID=Potri.010G253700.1.v4.1 annot-version=v4.1 ATGGCGAAGAGGGAAGTATTATTAGATAGATGGAGAACCATCGAGGAAGAAGAAGAACTTCACGCCAACGATGGCGATAATCCAGTCATACGACGCCGTC TTCACCTCCTCAAAGAACAATGGTTTTCAGACACATTTAAGTACTTGATTAGTTTGCCCAGAGAAGAACATATATGGTGTGGAGATTTTGATTTGATGGG CCCACTTTTAGAGACATTTTACAATTACTACAAAGATGACCGGCCGGACTCTCCGCTCCGGCTTCTGTGGAAGAGGATGTCTGGCGAAATGCGGCATTGC ATCCAGTGTGTATCTCAGCATCATCACGCTCAAGAGATGTATGACAAGGAGTACGAGACGAGTTCTATTGGACCACTTCTTGAGGTGTTAAGGAGTATTG ATGAGGAAAGGGTGACTCGGCATCTGAGAGAGATTAATGATAGATTGAAGAAGCAGGAGTATGATCATTTGCGTGATAATGTTGATGTTGTTAGTCTCAT GTATGAGGTCTTGATGTTTCCTGTCTTACTGGACGATCAATCTTTGCTATCTGAATTTGAATTATTCATCGAAGCAGTCGATAATATGCATGAACTGGCT TTATCTGGACATCAACAGTTTCCGGGTGTTTATGCGTTGCTTTTTCTGAATAGAAGAGTACGCACTGTTGGTAGACGTTTAGCACGATCTATGGAGAAAT TGAGGGGAGCAACAGATTTGGAACCTTTGCAGCCTTTACTGAAAAAATTCGTTGGGTTTTTAGAGACAGAAATACTACCATCAGCTTCTAAGACTTCGAG GCCAAGAGCACAGATGGAGCGCCTATCCATATGGCTTGGAATCACATCATTACTTGAGTTCCTAGAACCTCCAGCTTTTGAAGAAGGCATACTGGAGTGC TATCCCATTTTTTTTGATATTGTGCTCAACCATATCAGTGGCGATTCAGCTGAATTCTCTCATGCAGTAAGCTGTTTGAAAGAACTCTTCAAAATGCTTG GTTGCAAACTCTGGCTGAGGTCTACGTTGTCTCCAAGTGTGATGCGTAACACATTACTGGGCCAGTGTTTCCATACTCGAAATGAGAAAATCCATAAAGA CATTTTAGATCTTTTTCCACCTTTTCTGCAGTCCCTTGAGGCTTTGCAAGATGGGGAACATGAAAAGCAACGAAGGCACTTCCTTTATTTCCTACTCCAT CAAGTTCCCGTGAGCAGCAACTTCAATGTTCTTACAAGAAAACTTGCATGCAAGATAGCCCTTCTTATCGTACACCGAGGCTACAAGATGAACCCACCAT GCCCCCCTTATGAATGTGCTCATATGTGGGGCCCTTCACTTGTGGCTACTCTGAAGGATTCATCACTTCATAGTGCTCTCCGGCAACCTGCATTTGATCT TATACAGATTATTTTAGTTTCTGATGCTGCTGCCTTGCTAAGTACAATGTGGAGTAACCACACAATTATTGATGCTGATACAAACATTTGTCTTGAGCTG AATGATGATGTTAAAGATGAAGATAGGCTTCCATTTGTTATTGACGTCGAAGATACGGATGGTATATGTTGGAGTGAATTCAGTGCACAGAGCAAGATCG CTTCTGAAGAGCACAGAGGATGGATGTGCATTCCCATGCTATGGATTGATGTTTTAGTTGATATGGACCCATCAGTCCTTCCATTGTCATTTTCGAAGGC TGTTTTCTGGGCTCGATCTCATTTGACAATGGTAGAACCTGAAACCAGTGTGCAAACAGTTGGAACCTGGCTTTCAACTTCAGCCACAGAAATCTCCACT TCATTTGGGTGGAAGGTTCCGACAGGTTTTGATGATGGTGGGGTTGGAAAGGAGTCGAAAAACTCTATCAAAGTGTCAGTGATGCATCTTCCTTTAATAA GAACATTCAACAGGTTAACCACACACTTTTTAGCTCTAATGAGGCTAGGGGAATTACGGAAGCAATGGACTTGGGAGCCAAGCATGGCAGAGAGCTTGAT CCTTTCACTTTTGGATTCTAATGATGATGTGAGACAATTTGGCAAATGTATCTTGGAGCAGGTCTCAAGCACACGGGGTCTTGCATGTGGTTTGAAGTTT CTTTGCTCCAGCGGTTGTTCTTTGGCAGCCATGTTTTTAGGCTTGAGACATGCTTTGAAAGTGGTTCAACTGGATTCTGTTGTATCGAAGTTTCAGACTT TACAACATTTTTTCTTTGTTCTATGCAAACTAATTAAAGAAGGGGATTTACATAAACCAGATTTGCAACAAAATTCATCTGATGACTCAAAGATCAGAAA GTACTCTTCCCAAGGTGGATTTCTGACACATCCGGTCTTTGATTCTTCTTCTTCAAACATTGATGGACATTCATTAAATGTTGACTTGAAATTGCAAGAG AAATTTCGCTACTTACTATCAAGAATTGCATGGCCATCAATTCGGATGTTCTTGGTAGAAGGAAAGGCATTTATTGATTACAGTCTTTGTCAGATGACAT GTGTCCGTGTGCTTGAGATCCTCCCTGTTGTTTTCGAGAGACTTTTCCAACCTCTGTTTAAACATGCATGGGATAATGGAAAGATGGTGGAAAATCCATC CAACTTTGGATGGCTTTATGATCTGATGGATTGGGGAAAGTCATCGCTTAAAGTTGTAGTTGTCTACTGGAAGCGAACAGTAATTTATCTACTGAATCTG CTTAAAGGCTTTTGCAGTAATGCTTCTGAGTTGACTGTCAGGGCCATTGAAAAACTTATTTCATGTGATAATATAAGCATTGATCAATTGACAGAACAAG TATCACACCTTCGGGTTGCATTATCCAAGGAAGTGTCTTTTGATAATGTAATGATCACTTCAAAACCAAAAGCTCCAGATGTGCTTCCTGTTCCTGTAGA GGATGCTGATGTTCAAATTCTAGACTCAGTATCAGTGAGTGATAAGAGAAATAAAAGTGACGTGATTGTAGTTTCAGATGATGAAGCTGAAAAACAAATT TCACCTGTTAAGGTGGCTGCTTCCAAAAGTGACTCATGTCAAATAAGTTTGGATAGCAAGAAAATTGCTCCTGCTGATAGAAGTGTTTCACAAACTGATA CTGAAAATAAGGGATCTAGAAATGATACCTCAAGGGATCTACTGGATGACCCCCAACAAAAATATGCATTAGACATTACCAGTCTCACTTCTCAGAAGCT GGATTCTGATAAATTAAGAGGCAAACAACCTCCTCATCTCAAATCAAAAGGTGGATCTAAAAGCAGTAAAAATGTTCCTCTTTCATCCCAATGTAGAATT GATCTGAAGAGTCCTGAGTCTGTCAGCTCAAAAAGCTCGAATGAAGCTGGCAACAGCATGATTTCTGAAACAAGAGATTCAATACTGAAGGAGTTAGTGC GTGAAACTGGTGCTAATCCACCAGAGGCTGCAGTAAAATCTGTGAGGCAGCAGCAGTTTAATCTGACAAAGTTAACTGCCACTGTTCTTAAACGACAAGT TATCCAACTTAAAACACCTGCTGGAAATAGATTTGGAAATTTACAGAGACTGGAGGCTGGAGTTAAAAGATTCAAGCCTCCTAGACTTGATGACTGGTAT AGACCCATTTTGGAAATAGATTACTTTGCTATAGTGGGATTAGCATCTGCAAGAAAAGATGAGAATCGGACTGTTAGTAGATTAAAGGAGGTTCCTGTGT GTTTCCAATCACCAGAACAGTACATTGACATTTTCCGGCCACTTGTTTTGGAGGAGTTTAAAGCACAGTTGCGTAGTTCCTTTTTGGAGATGTCTTCATG GGGGGAGATGTATTATGGCAGTCTATCCGTGTTGTCTGTTGAAAGGATTGATGACTTTCATCTTGTCCGGTTTGTCCATGATGAAAGTGATTCTACATCA TCTAGAAGCTTTTCTGATAATGACCTTCTTTTGCTAACTAAAGAAGCTCCAGAAAATGCATCCCATGATGTTCATATGGTTGGAAAGGTGGAGAGGCGTG AAAGAGAGAATAAAAGAAGGTCAAGTATACTTCTCATCAGGTTCTATTTTCTAAATGGTTCTTTGCGTTTAAATCAAGCTAGGAGGCAACTTGTCGATCG TAGCAAATGGCATGCAAGTCGCATCATGAGCATTACACCTCAACTTAGAGAATTTCAGGCTCTATCATCAATAAAGGACATTCCCATCCTTTCAGCTATC TTAAAACCTGTCAATGATTCTCTATGTAATAATGAATCGAGAGAACTAGGTCTGAGTAATCTTTCTCAGCCCTTGCAGCAGACACTGAAGTCATCTTTTA ATGACAGCCAACTGCAAGCTATAAGTGTCGCGATTGGATCAACTATTTTGAAGAAAGATTTTGATCTGTCTCTAATACAGGGTCCTCCAGGGACTGGGAA GACCAGAACCATAGTGGCCATTGTCAGTGGCTTGCTTGCTTCACTACAAGGAACAAAGGATACAAAAAATTCTCTAAAGGGACATTTGAAACAAGGTAAT GGTTTGTCCATAACTTCAAGGCCAAAGATTAACCAGTCTGTTGCAATTGCCAGGGCTTGGCAGGATGCAGCGTTGGCTAGGCAGTTAAACAAGGACGTGG AAAGAAATGAAAAGTCTGTGGAAAGTTATTTTAGGAGAAGGGTGCTAATCTGTGCCCAATCAAATGCTGCTGTTGATGAGTTGGTGTCAAGAATTTCCAG TCAAGGACTTTATGGCAATGATGGGAAAATGTACAAGCCATATCTTGTAAGGGTTGGCAATGCAAAAACGGTTCATCCAAATTCACTTCCATTCTTTATC GATACACTTGTTGATAATCGTCTTGCTGAAGAGAGGATGCATTTGAGTGATTCTAAGAAAGATTCAGGTATAGGCTCTTCTGCAGCATTGCGTTCTAATC TGGAAAAGTTAGTTGATTGCATTAGGTTCTATGAGGCTAAGCGGGCTAACTTGAAGGATGGAAATTTGGACCTCAAAAATTCTTTGGAAGATGAATTGCA TAAAGAGGATGAAACAAAGCAAATGTCAGATTCTGAATTAGAGATCACACTAAAGAAATTATATGAAGAAAAGAAACAACTTTTTAAAGATCTTAGTGCT GCTCAGGTGCAAGAGAAGAAAACTAGTGAAGAAATCAGAGCAATGAAACATAAGCTGCGGAAGTTGATATTAAAGGATGCTGAAATAGTGGTAACGACAT TAAGTGGATGTGGTGGAGATCTCTATGTAGTTTGTTCTGAATCTATGTCAAATTATAAATTTGCTTGTCCATCTGAACATACCCTATTTGATGCAGTTGT GATTGATGAAGCAGCTCAGGCACTGGAACCTGCTACTTTGATTCCTCTTCAACTTTTAAAGTCAAATGGGACAAAGTGCATTATGGTTGGTGATCCGAAG CAGCTTCCTGCAACAGTTCTCTCTAATGTTGCAAGCAAGTTTCTTTATGAATGTAGCATGTTTGAGCGTCTACAAAGGGCTGGTCACCCAGTAACCATGC TTACCAAACAGTATAGGATGCACCCAGAGATTTGCCGGTTTCCCTCCTTGCACTTTTATGATAGCAAGTTGATGAATGGAGAGAAAATGTCAAACAAATC AGCATCATTTCATGAGATTGAGGTTCTTGGCCCTTATTTATTCTATGACATTATGGACGGCCAGGAGCTTCGCGGTAAAAATTCTGGTGCATCGTCCCTT TATAATGAACGTGAGGCTGAAGCTGCAGTTGAACTACTACGATTTTTCAAAAGGAGGTACTCATCCGAGTTTGTTGGTGGTAGAATTGGCATCATAACTC CATACAAATGCCAGCTCTCACTTCTGCGCTCTCGTTTTTCTAGTGCATTTGGATCATCTGTTGTCGCTGATATGGAGTTCAATACTGTTGATGGCTTTCA GGGACGAGAGGTTGATATACTGATACTTTCCACTGTTAGAGCAGCTGATTCAAATTCCTCTATGAATGAGTTGAGCTCCAGCAGTATTGGGTTTGTCGCT GATGTAAGACGGATGAATGTTGCCCTGACAAGAGCCAAGCTCTCCCTTTGGATTTTGGGTAATGCGAGGACCTTGCAGACGAACTGGAACTGGGCAGCTC TAGTAAAGGATGCTAAAGAGAGAAACTTGGTCATCTCAGCAAAACAGCCATATGAATCCTTGTTCGAAACAGCTCCTAGGGATACTTGCAGGAGAGAGAG TATTAATAATCATTCAAGACAGTCAAAGCATGTTGAAAATTTTAGAGGCAGCGGCAAACTAGGCAAACAAAATGAACAGAAAGTGTACAGGGATAAAAAC TCTATTCGTTCCGTTACTCGATGCGATGGTACTGTTGCTGGAGATGGTAAGGATTTTTATGTACAAAGCAGCAAAAGAAAACCCAGAGAGGAACATGATC TTCCAGGGAAAATGGATCTTCCGAAAAATTTCAAGTCTATCATTCCAGGGGAATCTGTTACTGGTGATGAAAGCAAGGGCAAAGACAGAAGTCAGAAGAA ACTTAGCTCTGGTAAGAAGAAAGATAAATGTGCAAATCCGAAGAGTACTAGGGAGCGTTCTGAACTTGAACTGGGTGATGGCCACAAAAATTTGAAATTG AGCATGTTGAGGGGACCAAAGAAATCTATTGAAGGTAAGAGAAGCCAGAAGAATTTGGACAGTTCTACATCCTCAGCTGAAGGCAGCCTCAAAAGTAAGG AGGTCAATGACGGTAGAGATCCTAATCCTGTAGGTGCTTCTTTAGATTTAATTACAAAGAGGAAACAACAACGTGAAGCTGTTGAGGCCATTCTAAACTC ATCTCTCATTTCCTCCAAGAAGTCAGAACCATCAACGAAATCTATGTCTTCCAAAAGGCCTCCTTCTCCAACCTCAGCTGTAAGTGGTGGAATCAGACCA CCCAAGACAAGAAAAGGTCCGCAGTAA
AA sequence Show only first row Show all	>Potri.010G253700.1 pacid=42796854 polypeptide=Potri.010G253700.1.p locus=Potri.010G253700 ID=Potri.010G253700.1.v4.1 annot-version=v4.1 MAKREVLLDRWRTIEEEEELHANDGDNPVIRRRLHLLKEQWFSDTFKYLISLPREEHIWCGDFDLMGPLLETFYNYYKDDRPDSPLRLLWKRMSGEMRHC IQCVSQHHHAQEMYDKEYETSSIGPLLEVLRSIDEERVTRHLREINDRLKKQEYDHLRDNVDVVSLMYEVLMFPVLLDDQSLLSEFELFIEAVDNMHELA LSGHQQFPGVYALLFLNRRVRTVGRRLARSMEKLRGATDLEPLQPLLKKFVGFLETEILPSASKTSRPRAQMERLSIWLGITSLLEFLEPPAFEEGILEC YPIFFDIVLNHISGDSAEFSHAVSCLKELFKMLGCKLWLRSTLSPSVMRNTLLGQCFHTRNEKIHKDILDLFPPFLQSLEALQDGEHEKQRRHFLYFLLH QVPVSSNFNVLTRKLACKIALLIVHRGYKMNPPCPPYECAHMWGPSLVATLKDSSLHSALRQPAFDLIQIILVSDAAALLSTMWSNHTIIDADTNICLEL NDDVKDEDRLPFVIDVEDTDGICWSEFSAQSKIASEEHRGWMCIPMLWIDVLVDMDPSVLPLSFSKAVFWARSHLTMVEPETSVQTVGTWLSTSATEIST SFGWKVPTGFDDGGVGKESKNSIKVSVMHLPLIRTFNRLTTHFLALMRLGELRKQWTWEPSMAESLILSLLDSNDDVRQFGKCILEQVSSTRGLACGLKF LCSSGCSLAAMFLGLRHALKVVQLDSVVSKFQTLQHFFFVLCKLIKEGDLHKPDLQQNSSDDSKIRKYSSQGGFLTHPVFDSSSSNIDGHSLNVDLKLQE KFRYLLSRIAWPSIRMFLVEGKAFIDYSLCQMTCVRVLEILPVVFERLFQPLFKHAWDNGKMVENPSNFGWLYDLMDWGKSSLKVVVVYWKRTVIYLLNL LKGFCSNASELTVRAIEKLISCDNISIDQLTEQVSHLRVALSKEVSFDNVMITSKPKAPDVLPVPVEDADVQILDSVSVSDKRNKSDVIVVSDDEAEKQI SPVKVAASKSDSCQISLDSKKIAPADRSVSQTDTENKGSRNDTSRDLLDDPQQKYALDITSLTSQKLDSDKLRGKQPPHLKSKGGSKSSKNVPLSSQCRI DLKSPESVSSKSSNEAGNSMISETRDSILKELVRETGANPPEAAVKSVRQQQFNLTKLTATVLKRQVIQLKTPAGNRFGNLQRLEAGVKRFKPPRLDDWY RPILEIDYFAIVGLASARKDENRTVSRLKEVPVCFQSPEQYIDIFRPLVLEEFKAQLRSSFLEMSSWGEMYYGSLSVLSVERIDDFHLVRFVHDESDSTS SRSFSDNDLLLLTKEAPENASHDVHMVGKVERRERENKRRSSILLIRFYFLNGSLRLNQARRQLVDRSKWHASRIMSITPQLREFQALSSIKDIPILSAI LKPVNDSLCNNESRELGLSNLSQPLQQTLKSSFNDSQLQAISVAIGSTILKKDFDLSLIQGPPGTGKTRTIVAIVSGLLASLQGTKDTKNSLKGHLKQGN GLSITSRPKINQSVAIARAWQDAALARQLNKDVERNEKSVESYFRRRVLICAQSNAAVDELVSRISSQGLYGNDGKMYKPYLVRVGNAKTVHPNSLPFFI DTLVDNRLAEERMHLSDSKKDSGIGSSAALRSNLEKLVDCIRFYEAKRANLKDGNLDLKNSLEDELHKEDETKQMSDSELEITLKKLYEEKKQLFKDLSA AQVQEKKTSEEIRAMKHKLRKLILKDAEIVVTTLSGCGGDLYVVCSESMSNYKFACPSEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGTKCIMVGDPK QLPATVLSNVASKFLYECSMFERLQRAGHPVTMLTKQYRMHPEICRFPSLHFYDSKLMNGEKMSNKSASFHEIEVLGPYLFYDIMDGQELRGKNSGASSL YNEREAEAAVELLRFFKRRYSSEFVGGRIGIITPYKCQLSLLRSRFSSAFGSSVVADMEFNTVDGFQGREVDILILSTVRAADSNSSMNELSSSSIGFVA DVRRMNVALTRAKLSLWILGNARTLQTNWNWAALVKDAKERNLVISAKQPYESLFETAPRDTCRRESINNHSRQSKHVENFRGSGKLGKQNEQKVYRDKN SIRSVTRCDGTVAGDGKDFYVQSSKRKPREEHDLPGKMDLPKNFKSIIPGESVTGDESKGKDRSQKKLSSGKKKDKCANPKSTRERSELELGDGHKNLKL SMLRGPKKSIEGKRSQKNLDSSTSSAEGSLKSKEVNDGRDPNPVGASLDLITKRKQQREAVEAILNSSLISSKKSEPSTKSMSSKRPPSPTSAVSGGIRP PKTRKGPQ

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G16800			P-loop containing nucleoside t...		Potri.010G253700 [exp]	0	1
AT1G19220	ARF	IAA22, ARF11, A...	indole-3-acetic acid inducible...		Potri.018G063000 [exp]	1.41	0.8831	NPH4.1
AT3G44530		HIRA	homolog of histone chaperone H...		Potri.004G184900 [exp]	3.87	0.8668
AT1G31810		AFH14	Formin Homology 14 (.1)		Potri.003G103800 [exp]	5.19	0.8517
AT1G29400		AML5	MEI2-like protein 5 (.1.2)		Potri.002G059800 [exp]	8.83	0.8626
AT3G57300		ATINO80	INO80 ortholog (.1.2)		Potri.006G047100 [exp]	9.38	0.8684
AT4G11670			Protein of unknown function (D...		Potri.001G108400 [exp]	10.29	0.8012
AT1G72390			unknown protein		Potri.003G069200 [exp]	11.83	0.8496
AT2G39340		AtSAC3A	yeast Sac3 homolog A, SAC3/GAN...		Potri.008G047700 [exp]	12.32	0.8558
AT5G27680		RECQSIM	RECQ helicase SIM (.1)		Potri.005G026400 [exp]	13.15	0.7546
AT3G21480			BRCT domain-containing DNA rep...		Potri.010G014700 [exp]	13.85	0.8200

Compare expression of checked genes

Potri.010G253700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.