Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G39200 424 / 2e-143 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 420 / 1e-141 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G11310 404 / 2e-135 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT3G45290 361 / 1e-119 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT5G65970 357 / 2e-117 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G33670 331 / 4e-108 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT2G17430 328 / 2e-106 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G17480 327 / 2e-105 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT1G42560 310 / 3e-100 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT4G02600 305 / 1e-97 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G058900 [exp] 924 / 0 AT1G61560 445 / 2e-151 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.004G050000 [exp] 757 / 0 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 432 / 6e-146 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 414 / 3e-139 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.010G220500 [exp] 413 / 5e-139 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 396 / 1e-133 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 392 / 4e-131 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.006G129700 [exp] 371 / 4e-123 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.003G002500 [exp] 356 / 3e-117 AT3G45290 551 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015328 [exp] 515 / 7e-180 AT1G11310 432 / 2e-146 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Lus10025457 [exp] 513 / 4e-179 AT1G11310 432 / 2e-146 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Lus10040388 [exp] 424 / 9e-143 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 418 / 8e-140 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 404 / 4e-135 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 402 / 3e-134 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036121 [exp] 379 / 4e-126 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 344 / 1e-111 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 330 / 5e-106 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 328 / 9e-106 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [poplar] [flax] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Potri.011G059200.1 pacid=42781556 polypeptide=Potri.011G059200.1.p locus=Potri.011G059200 ID=Potri.011G059200.1.v4.1 annot-version=v4.1 ATGGCTGGAGAAGGAGAAGCAAAAACACTCGAAGAAACACCAACATGGGCTGTGGCTACTGTTTGTTTGTTTCTGATATTAATATCTATGTTTATTGAGC ACTGGCTTCATCTTTTAGCTAAGTATTTCAACAAGAAAAGGAGGAAGTACCTCATTCAAGCTCTGTACAAGATCAAAACAGAGGTGATGCTACTGGGTTT CATCTCATTGTTGCTGACTGTATTGGAAAAGCCAGTTGCAAATATATGTATCCCAAAGAGTGCTGGCGAAACCTTTCTTCCCTGTGGTGGTGTGGATTCA AGTGATTGGAGTGAAGAAGAAGCCAAATGTGCAGAGCAGGGAAAGGCTTCTTTGTTGTCCAGGGAAGGTATGAGGCAACTCCAGTACTTGATATTTGTGC TGGCTTCCTTCCATTGCTTATCAAGCATTTTTACTTTCGGCCTAGGGATGGCCAAGATGAGAAGATGGGGATCCTGGGAGGCAGAGACAAGGACACTGGA TTATCAAATTTCAACAGATCCCAGGAGGTTCCAGCTCAGTCATCAAACACCATTTGGGAAGCGGCATCTGAGATATTGGAATGAAAACTCAGTTCTTCGC TGGCCGGCATGTTTCCTCGGACAATTTTATGGTTCCGTTCCCAAAGTGGATTATCTAACACTGAGGCATGGATTTATCATGGCCCATTTTGATCAAGATA ACAGCTTTGATTTTCAAAAATACATTAGAAGAGCCTTGGATAAAGATTTTGGCGTGTTAGTGGGGATAAGCTTCTGGATGTGGATGTTTTCTATATCTTT CATATTCTTCAATGCACACAAATTTTACAGTCATTATTGGCTTCCATTTATTCCACTACTGATGTTGTTGCTGGTTGGGACAAAGCTGCAAGCCATCATA ACTTTAATGTGCTTAGATAGCCATGATAAATCTCTTGTTGTTGAAGAAACTATACTCGTTAGGCCTAGTGACCATTTCTTCTGGTTTGGTAGGCCTAAAT TGCTTCTCCACCTTATACAATTCATATTGTTTCAGAACTCCTTTCAATTGGCCTTCTTCACATGGACTTTGTACAAATTTGGATTTAGATCATGCTTCCA CCGACGAACAGAAGACATTGTCATAACGCTTGTCATGGGACTGTTGGTTCACTTCCTCTGTGGCTATGTGATCCTACCTCTATATGCTTTGGTCACACAG ATGGGTTCATCAATGAGGACAGCTGTTTTCACAGAGAATGTGGTTGAAGGTCTGAAGAGATGGCGAGCAAGAGCAAAGGCTAGGAAGAACCTGAAAATTT CCTACTCAGCCCGCCCCTCCCTTGATGCTTCAGTTGACCCCTCACTTCCCTTTGACACTTCTCCTTCTTTCAGCCTCAGTGCTTCATATTCTATAGACCC AAATCCTCCATTGGACAGAGATCATGTTACCATTGAAGTACTTGATGAAGCAAAACACAACGATGAGCAGCCCTGGGAGCTTAAAAGAAATGGTTCATTT GAAGGCTTTAACGTGAGCAATGCAGCCCCGGCAATGGAAAAACAAAGCCGTTTATAA
AA sequence Show only first row Show all	>Potri.011G059200.1 pacid=42781556 polypeptide=Potri.011G059200.1.p locus=Potri.011G059200 ID=Potri.011G059200.1.v4.1 annot-version=v4.1 MAGEGEAKTLEETPTWAVATVCLFLILISMFIEHWLHLLAKYFNKKRRKYLIQALYKIKTEVMLLGFISLLLTVLEKPVANICIPKSAGETFLPCGGVDS SDWSEEEAKCAEQGKASLLSREGMRQLQYLIFVLASFHCLSSIFTFGLGMAKMRRWGSWEAETRTLDYQISTDPRRFQLSHQTPFGKRHLRYWNENSVLR WPACFLGQFYGSVPKVDYLTLRHGFIMAHFDQDNSFDFQKYIRRALDKDFGVLVGISFWMWMFSISFIFFNAHKFYSHYWLPFIPLLMLLLVGTKLQAII TLMCLDSHDKSLVVEETILVRPSDHFFWFGRPKLLLHLIQFILFQNSFQLAFFTWTLYKFGFRSCFHRRTEDIVITLVMGLLVHFLCGYVILPLYALVTQ MGSSMRTAVFTENVVEGLKRWRARAKARKNLKISYSARPSLDASVDPSLPFDTSPSFSLSASYSIDPNPPLDRDHVTIEVLDEAKHNDEQPWELKRNGSF EGFNVSNAAPAMEKQSRL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G39200		ATMLO12, MLO12	MILDEW RESISTANCE LOCUS O 12, ...		Potri.011G059200 [exp]	0	1
AT1G80830		ATNRAMP1, PMIT1...	natural resistance-associated ...		Potri.002G080500 [exp]	13.41	0.8801
AT4G12430		TPPF	trehalose-6-phosphate phosphat...		Potri.003G112400 [exp]	16.30	0.8363
AT2G45220			Plant invertase/pectin methyle...		Potri.015G127700 [exp]	20.24	0.8616	Pt-PME.5
					Potri.001G019890 [exp]	31.87	0.8511
AT1G65870			Disease resistance-responsive ...		Potri.016G060700 [exp]	32.63	0.8509
AT2G30210		LAC3	laccase 3 (.1)		Potri.013G152700 [exp]	33.34	0.8474
AT2G30210		LAC3	laccase 3 (.1)		Potri.019G124300 [exp]	41.46	0.8471
AT5G45160			Root hair defective 3 GTP-bind...		Potri.012G117001 [exp]	48.18	0.8322
AT4G13010			Oxidoreductase, zinc-binding d...		Potri.001G452600 [exp]	48.78	0.8320
AT3G62150		ABCB21, PGP21	ATP-binding cassette B21, P-gl...		Potri.014G113400 [exp]	50.19	0.8352

Compare expression of checked genes

Potri.011G059200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.