MRP1.1 (Potri.011G091200) [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol MRP1.1
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT2G34660 2491 / 0 EST4, ATMRP2, ABCC2, AtABCC2 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2)
AT1G30400 2491 / 0 ATABCC1, EST1, ATMRP1 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1, Arabidopsis thaliana ATP-binding cassette C1, ATP-binding cassette C1, multidrug resistance-associated protein 1 (.1.2)
AT1G30410 2118 / 0 ATMRP13, ABCC12 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1)
AT1G30420 2087 / 0 ATMRP12, ABCC11 ATP-binding cassette C11, multidrug resistance-associated protein 12 (.1)
AT3G62700 757 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
AT1G04120 754 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
AT3G60160 742 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
AT2G47800 741 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1)
AT3G59140 715 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
AT3G13080 711 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.004G034800 2326 / 0 AT1G30410 2242 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1)
Potri.004G034700 2306 / 0 AT1G30410 2216 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1)
Potri.011G043100 2100 / 0 AT1G30410 2090 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1)
Potri.014G130500 771 / 0 AT3G62700 2059 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
Potri.014G180100 766 / 0 AT3G60160 1930 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
Potri.002G205500 745 / 0 AT3G62700 2043 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
Potri.014G193400 735 / 0 AT1G04120 2323 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
Potri.002G255800 728 / 0 AT1G04120 2361 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
Potri.012G033600 726 / 0 AT3G59140 1948 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10023275 2641 / 0 AT2G34660 2553 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2)
Lus10038530 2630 / 0 AT2G34660 2543 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2)
Lus10036153 2023 / 0 AT2G34660 2041 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2)
Lus10022858 756 / 0 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2)
Lus10039320 751 / 0 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Lus10027567 745 / 0 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Lus10011498 744 / 0 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1)
Lus10018027 736 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
Lus10042023 733 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1)
Lus10023139 718 / 0 AT3G62700 1659 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0023 P-loop_NTPase PF00005 ABC_tran ABC transporter
CL0241 ABC_membrane PF00664 ABC_membrane ABC transporter transmembrane region
Representative CDS sequence
>Potri.011G091200.12 pacid=42780885 polypeptide=Potri.011G091200.12.p locus=Potri.011G091200 ID=Potri.011G091200.12.v4.1 annot-version=v4.1
ATGGGATTTGAAGCATTGGATTGGTACTGCAAACCAGTGAGAGATGGGGTGTGGACTAAAGCAGTGCAAAATGCATTTGGTGCGTACACACCTTGTGCCA
CTGACACTCTGGTGGTCTCCCTTTCTTATCTTGTTCTCATGGCACTTTGCTTCTATAAAATCTGGCTTACCAAGAAAGACTTCAAGCTCCAAAGATTCTG
TTTGAGGTCTAAGTGGTATGCCTATTTGCTGGCTCTGCTTGCTCTTTATTCCACCGCCGAGCCCTTGTACAGATTGGTCATGGGTATTTCGGTTCTCAAT
TTAGATGGACAGACAGGCCTTGCTCCATTTGAGATTGGTTCCTTGATTATTGAGGCCCTTGCTTGGTGCTCCTTGCTGGTTATGATTGTTGTAGAAATTA
AAGTCTATATTCGTGAATTTCGATGGTTTGTTCGATTCGGGGTCATTTATACTTTGGTGGGTGATGCAGTGATGCTCAATCTTATCCTCACAGTAAAGGA
GTTCTATAACAATGCTGTGCTGCATCTATACATTAGTGAGGTCATTGTTCAGGGCTTGTTTGGAATACTACTACTTGTGTATGTTCCTGACTTGGATCCT
TATCCTGGTTACACTCCAATGCAAATTGAATCTGTTGATGATGCTGAATATGAAGAGTTACCTGGAGGAGAGTACATATGTCCTGAGAGGCACGCCAACA
TAATTTCCAAAATTGTTTTTGGATGGATGAGTCCCCTTATGAAGCTAGGATATAGGAGACCCATCACCGAGAAGGATGTTTGGAAATTGGATACGTGGGA
TCGCACTGAAACTCTTAATGATAGGTTCCAAAAATGTTGGGCTGAGGAATTAAGAAAACCAAAACCATGGCTGTTGAGGGCATTAAATAGTAGCCTTGGA
GGGAGGTTTTGGTGGGGAGGCTTCTGGAAGATTGGCAATGATGCTTCCCAATTTGTTGGGCCACTCGTCTTGAACCAACTCTTAAAGTCTATGCAAGAAG
GTGATCCGGCTTGGATTGGTTATGTCTATGCTTTCTCAATTTTTGCTGGAGTGGTATTCGGTGTGTTATGTGAAGCACAGTATTTTCAGAATGTCATGCG
TGTTGGTTACCGCCTGAGAGCAACTTTGGTTGCTGCTGTGTTTCGAAAATCTCTAAGGCTGACCCACGAAGGTCGGCGGAAGTTTGCATCTGGAAAAATA
ACCAACTTGATGACAACTGATGCTGAAGCACTTCAGCAAATATGCCAATCACTTCACACTTTGTGGTCAGCTCCATTCCGTATTATTGTTGCCATGGTTC
TTCTTTATCAGCAGTTGAATGTTGCTTCTCTTCTCGGCGCACTAATGCTAGTTCTTCTGTTCCCCATACAGACATTTGTTATAAGCAGAATGCAGAAGTT
ATCTAAGGAGGGTTTGCAGCGTACAGACAAGAGAATTGGACTCATGAATGAAATTTTGGCTGCAATGGATACTGTGAAATGTTATGCATGGGAAAGTAGC
TTCCAGGCTAAAGTTCAAGGTGTTAGGGATGATGAATTATCATGGTTCCGAAAAGCATCACTACTAGGAGCGTGTAATAGTTTCATACTAAACAGCATTC
CAGTTATGGTGACTGTGATTTCGTTTGGTATGTACACTTTGCTTGGTGGAAATCTGACACCTGCAAGGGCATTTACATCTCTATCTCTGTTTGCTGTGCT
TCGCTTTCCCCTCTTCATGCTTCCTAATATGATTACTCAGGTGGTAAATGCAAATGTGTCCTTAAAGCGTCTGGAGGAACTATTTTTAGCTGAAGAGAGA
ATCCTTCTACCAAACCCTCTTCTTGATCCTTGCTTACCAGCCGTTTCCATCAAGAATGGATACTTTTCTTGGGATTCAAAGGCAGAGAGACCCACATTGT
CAAATATCAATTTGGATGTACCAATTGGTAGCCTAGTTGCAGTTGTTGGCAGCACTGGAGAGGGTAAGACCTCACTTGTTTCAGCAATGCTGGGGGAGCT
TCCTGCAACATCAGATGCCAGTGTTGTTATTAGAGGAACAGTAGCTTATGTTCCACAAGTTTCCTGGATTTTTAATGCAACAGTACGGGATAACATTCTC
TTTGGATCTCCCTTTGATTCAGCAAGATATGAGAAGGCAATTGATGTGACTGCATTGCAACATGACCTTGATTTACTGCCTGGTGGTGATCTCACCGAGA
TTGGTGAAAGAGGTGTGAATATCAGTGGTGGGCAAAAGCAAAGAGTTTCCATGGCTCGGGCTGTATATTCCAATTCAGATGTTTATATTTTTGATGACCC
CTTAAGTGCTCTGGATGCCCAAGTAGGCCGACAGGTTTTTGATAAATGCATCAAGGGAGAATTAAGCAAGAAAACGAGAATTCTGGTCACAAACCAACTT
CATTTTCTTTCTCAAGTTGATAGAATCATACTGGTTCATGAGGGTATGGTGAAAGAGGAGGGCACCTTTGAGGACCTCTCTAATAATGGAATGCTGTTCC
AGAAGCTGATGGAAAATGCAGGGAAAATGGAAGAATACGAAGAACAGGAAAATAATGAAATTGTTGATCATAAAACCTCTTCAAAGCAGGTTGCTAATGG
GGTAATGAATAACTTGCCAAAGAATGTAAGTGGTACAAAGAAACCAAAAGAAGGCAAATCTGTTCTTATCAAGCAAGAAGAACGGGAAACAGGTGTTGTC
AATTTGAAAGTGCTGATAAGGTACAAGAATGCATTAGGAGGTGCATGGGTGGTGATGGTACTCTTTATGTGCTATTTAATGACAGAAGTTTTACGTGTTT
CAAGTAGTACATGGTTGAGCAATTGGACAAATCAAGGCACTTCAAAGAGACATGGGCCTCTCTACTATAATCTAATCTATTCCTTTCTATCAATTGGTCA
GGTGTCAGTGACATTATTAAATTCATATTGGTTGATTACATCAAGTCTCTATGCCGCCAAGAGACTGCATGATGCGATGCTTAATTCCATACTAAGAGCT
CCAATGGTCTTCTTCCACACCAATCCACTTGGACGTATTATCAATAGGTTTGCCAAGGATCTAGGTGATATTGATCGAAATGTTGCCATATTTGTAAATA
TGTTCATGGGCCAAATATCACAGCTTCTTTCTACATTTGTTCTCATTGGAATTGTGAGCACCATGTCTTTATGGGCCATAATGCCACTTTTGGTTTTGTT
TTATGGAGCCTACCTTTATTACCAGAGCACAGCCCGTGAAGTAAAGCGACTGGATTCCATAACTAGATCACCTGTTTATGCACAATTTGGAGAAGCTCTG
AATGGTCTGTCAACTATTCGTGCATACAAAGCTTATGATCGGATGGCCAGCATAAATGGAAAATCAATGGACAACAATGTCAGATACACCCTTGTCAACA
TGGGTGCAAACCGCTGGCTGGCAATCCGGTTGGAAACATTAGGGGGCATTATGATTTGGTTTACAGCGACCTTCGCGGTTATGCAGAATGGGAGGGCAGA
TAACCAGCAGGCTTTTGCATCTACAATGGGTCTACTTCTCAGTTATGCTTTAAACATCACTAGTTTGTTGACTGCTGTACTGAGACTTGCTAGTTTGGCT
GAGAATAGCTTAAATTCTGTGGAACGGGTTGGCACATATATAGAGTTGCCATCAGAGGCTCCACTTGTTATTGAGAGCAATCGTCCCCCTCCTGGATGGC
CTTCATCAGGAGCGATCAAGTTTGAAGATGTTGTCTTACGTTACAGGCCTGAACTTCCACCAGTCTTGCATGGGTTGTCCTTCACTATTTTTCCTAGTGA
CAAGGTTGGGATTGTTGGAAGGACTGGTGCTGGAAAGTCCAGCATGCTCAATGCTTTATTTCGAATTGTAGAGCTGGAAAGAGGAAGGATTTTGATTGAT
GATTGTGATATTTCAAAGTTTGGATTGATGGATCTACGCAAAGTACTTGGTATCATACCACAGGCACCTGTTCTTTTTTCAGGAACTGTCAGGTTTAATC
TTGATCCTTTCAGTGAACACAATGATGCTGATCTTTGGGAGGCTTTGGAGAGGGCTCATTTGAAGGATGTTATCCGAAGGAATTCCTTAGGACTGGATTC
TGAGGTTACAGAGGCAGGGGATAATTTCAGTGTTGGACAGAGACAGTTGTTAAGTCTTGCTAGGGCATTGTTGCGAAGATCAAAGATACTTGTTCTTGAT
GAAGCTACTGCAGCTGTTGATGTCAGAACAGATGCTCTTATTCAGAAAACTATTCGAGAAGAATTCAGATCATGTACAATGCTAATTATTGCACATCGAC
TCAATACCATCATTGATTGTGACCGGGTCATTCTGCTTGATTCTGGCCGGGTTCTGGAGTATGATACACCAGAGGAACTGCTTTCAAATGAAAATAGTGC
ATTCTCTAAGATGGTTCAAAGTACAGGGGCTGCAAATGCTCAGTACTTACGCAGCTTGGTAATGGGAGGGGAACGAGAGAGTAGGTTGGGAAGAGAAGAG
AACAAACAGTTAGATGGACCGAGGAGATGGCTGGCCTCCTCTCGTTGGGCTGCTGCAGCACAGTTCGCTCTTGCTGTTAGCCTCACTTCATCGCAGAATG
ACCTCCAACAGTTGGAAATTGAGGATGAAAACTCTGTTCTGAAGAAAACAAAGGATGCGGTGGTAACTTTGCAAAGAGTGTTGGAAGGGAAGCATGACAA
AGTAATTGATGAGTCACTAAATCAATATCAAATATCCAGAGATGGGTGGTGGTCAGCTCTTTACAAAATGGTTGAAGGTCTTGCCATGATGAGCAGACTG
GGTCGGCACAGGCTTCACCAATCAGACTATGGCTTAGAAGACAAAACAATTGACTGGAACCATGTTGAAATGTAG
AA sequence
>Potri.011G091200.12 pacid=42780885 polypeptide=Potri.011G091200.12.p locus=Potri.011G091200 ID=Potri.011G091200.12.v4.1 annot-version=v4.1
MGFEALDWYCKPVRDGVWTKAVQNAFGAYTPCATDTLVVSLSYLVLMALCFYKIWLTKKDFKLQRFCLRSKWYAYLLALLALYSTAEPLYRLVMGISVLN
LDGQTGLAPFEIGSLIIEALAWCSLLVMIVVEIKVYIREFRWFVRFGVIYTLVGDAVMLNLILTVKEFYNNAVLHLYISEVIVQGLFGILLLVYVPDLDP
YPGYTPMQIESVDDAEYEELPGGEYICPERHANIISKIVFGWMSPLMKLGYRRPITEKDVWKLDTWDRTETLNDRFQKCWAEELRKPKPWLLRALNSSLG
GRFWWGGFWKIGNDASQFVGPLVLNQLLKSMQEGDPAWIGYVYAFSIFAGVVFGVLCEAQYFQNVMRVGYRLRATLVAAVFRKSLRLTHEGRRKFASGKI
TNLMTTDAEALQQICQSLHTLWSAPFRIIVAMVLLYQQLNVASLLGALMLVLLFPIQTFVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESS
FQAKVQGVRDDELSWFRKASLLGACNSFILNSIPVMVTVISFGMYTLLGGNLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRLEELFLAEER
ILLPNPLLDPCLPAVSIKNGYFSWDSKAERPTLSNINLDVPIGSLVAVVGSTGEGKTSLVSAMLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNIL
FGSPFDSARYEKAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAQVGRQVFDKCIKGELSKKTRILVTNQL
HFLSQVDRIILVHEGMVKEEGTFEDLSNNGMLFQKLMENAGKMEEYEEQENNEIVDHKTSSKQVANGVMNNLPKNVSGTKKPKEGKSVLIKQEERETGVV
NLKVLIRYKNALGGAWVVMVLFMCYLMTEVLRVSSSTWLSNWTNQGTSKRHGPLYYNLIYSFLSIGQVSVTLLNSYWLITSSLYAAKRLHDAMLNSILRA
PMVFFHTNPLGRIINRFAKDLGDIDRNVAIFVNMFMGQISQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEAL
NGLSTIRAYKAYDRMASINGKSMDNNVRYTLVNMGANRWLAIRLETLGGIMIWFTATFAVMQNGRADNQQAFASTMGLLLSYALNITSLLTAVLRLASLA
ENSLNSVERVGTYIELPSEAPLVIESNRPPPGWPSSGAIKFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILID
DCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWEALERAHLKDVIRRNSLGLDSEVTEAGDNFSVGQRQLLSLARALLRRSKILVLD
EATAAVDVRTDALIQKTIREEFRSCTMLIIAHRLNTIIDCDRVILLDSGRVLEYDTPEELLSNENSAFSKMVQSTGAANAQYLRSLVMGGERESRLGREE
NKQLDGPRRWLASSRWAAAAQFALAVSLTSSQNDLQQLEIEDENSVLKKTKDAVVTLQRVLEGKHDKVIDESLNQYQISRDGWWSALYKMVEGLAMMSRL
GRHRLHQSDYGLEDKTIDWNHVEM

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT2G34660 EST4, ATMRP2, A... Arabidopsis thaliana ATP-bindi... Potri.011G091200 0 1 MRP1.1
AT5G49760 Leucine-rich repeat protein ki... Potri.004G231850 5.65 0.8275
AT1G61040 VIP5 vernalization independence 5, ... Potri.011G047900 10.81 0.7433
AT2G48110 MED33B, REF4 reduced epidermal fluorescence... Potri.002G215600 12.48 0.7440
AT2G26000 BRIZ2 BRAP2 RING ZnF UBP domain-cont... Potri.007G063900 13.22 0.7262
AT5G49760 Leucine-rich repeat protein ki... Potri.004G232400 15.62 0.7874
AT5G13020 AtEML3, ACK1 EMSY-like 3, Emsy N Terminus (... Potri.003G212300 20.44 0.7130
AT1G14670 Endomembrane protein 70 protei... Potri.012G042300 21.54 0.7212
AT5G24060 Pentatricopeptide repeat (PPR)... Potri.004G072400 24.08 0.7606
AT4G27290 S-locus lectin protein kinase ... Potri.011G128650 26.15 0.7168
AT5G02810 APRR7, PRR7 pseudo-response regulator 7 (.... Potri.010G215200 26.94 0.7176

Potri.011G091200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.