Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ATK2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G54670 1058 / 0 KATC, ATK3 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) AT4G27180 1001 / 0 KATB, ATK2 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA B, kinesin 2 (.1) AT4G21270 873 / 0 KATAP, ATK1 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) AT4G05190 868 / 0 ATK5 kinesin 5 (.1) AT1G72250 331 / 8e-99 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 313 / 1e-95 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G73860 317 / 2e-94 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G22610 310 / 7e-92 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G41310 295 / 6e-87 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G63640 296 / 7e-87 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G416300 [exp] 1350 / 0 AT5G54670 1090 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Potri.011G031200 [exp] 904 / 0 AT4G21270 1109 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.004G031600 [exp] 891 / 0 AT4G21270 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.001G436200 [exp] 322 / 2e-95 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.011G140000 [exp] 317 / 1e-93 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.013G020700 [exp] 306 / 7e-93 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G030271 [exp] 299 / 5e-90 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.002G110600 [exp] 296 / 5e-87 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G104000 [exp] 293 / 1e-85 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035838 [exp] 1099 / 0 AT5G54670 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10036621 [exp] 1098 / 0 AT5G54670 1075 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10018384 [exp] 812 / 0 AT4G21270 989 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Lus10007629 [exp] 803 / 0 AT4G21270 975 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Lus10035954 [exp] 306 / 2e-90 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10005582 [exp] 302 / 1e-88 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 302 / 2e-88 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10029914 [exp] 294 / 5e-88 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10004487 [exp] 292 / 3e-87 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10032264 [exp] 296 / 3e-86 AT1G63640 991 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00225 [poplar] [flax] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Potri.011G131900.2 pacid=42782188 polypeptide=Potri.011G131900.2.p locus=Potri.011G131900 ID=Potri.011G131900.2.v4.1 annot-version=v4.1 ATGGTTGGGACTGCAAATAATGGCAGAATGAGGCATGCATTTTCAGTTGTAAATGGTGAGGAAGAGGTTGGTCTAAATAGTGTACCGCCTAGTAATGCTG GATCAGAGTATGGTGGGTTTGAGTTCACAAGAGAAGATGTTTATGGTTTGCTGAATGAGAGAATGAAATACAAAAACAAGTTCAATTACAAGGAAAGATG TGAAAACATGATGGATTATATAAAGAGGTTAAGGCTTTGTATCAAATGGTTTCAAGAGCTAGAAGGAGGTTACCTCTTTGAGCAGGAGAAGTTGCAAAAT GCATTGGATTTTACTGAGAGTAAATGTGCTGAAATGGATTTGATGCTGAAAAACAAGGAAGAAGAGTTGAATTTGATTATCGTGGAGTTGAGAAAGAGCC TTGCTTCTCTGCAGGAAAAACTTTCCAAAGAGGAATCTGAGAAGTTGGCTGCATTGGATTCTCTTGCCAGAGAGAAAGAGGCCAGACTTACTGTTGAGAA GTCACAAGCTTCCCTCTTGGAAGAGCAAGGAAAGATTCAAGGAGAGCTTCAAAGTGCTAACCAAAGGATAACATCAGTAAGCGATATGTACAAGTTACTA CAGGAGTACAATTCAAGCTTACAACTCTACAATAGCAAGCTTCAGACAGATCTTGATACAGCTCATGAAAATGTAAAGCGCGGAGAAAAAGAGAAAGCTG CTATAGTTGAGAATCTTAGCACCTTAAGGGGTCAATGCATGTCATTGCAAGATCAATATAATTCATGCAAAGCATCTGTGGATGAAGTTGCAAAGCAAAA GGACACACTGGTGAATGAAGTTGCATCTTTAAGGGCAGAGTTGCAACAAGTGAGCGAGGATCGTGATAGTCTGCTATTGCAAGTGCAAACTTTAACAGCT GAAGTAGTTAATTGTGAAGAGCTCGTTGAAAAATCTAATGAATTGAAGGAAAAATGTTTTTCCCAGAGTAATCAGTTGATGACTCTGCAGGATGAGCTAG AGGCTACCCAAAATAAATTAAGGGTATCTGATTTATCTGTATTTGAGACAAAAACTGAATTTGAAGCACAAAAGAAACTTATAAGCGAGTTACAGAACCG CTTAGAAGATGCAGAACTTAAAATTGTTGAAGGAGAGAAGTTTCGAAAAAAGCTACACAATACAATATTGGAACTAAAGGGAAATATTCGTGTGTTTTGT CGAGTGCGTCCTCTGATACCAGAGGACAGTCCTGGTGCTGATGGAAAAGTTGTATCTTATCCCACAACGACAGAAGCTCTAGGGCGAGCCATTGAATTGA CACAAAATGGGCAAAAATATTCTTTCACTTTCGATAAAGTTTTTATGCCCGATGCATCACAAGAGGATGTTTTTGTGGAGATTTCACAGCTTGTTCAAAG TGCTCTTGATGGCTATAAGGTTTGCATCTTTGCCTATGGCCAAACAGGTTCAGGTAAAACTTATACCATGATGGGCAAATCGGGAAACCCGGAGCAGAAG GGGTTGATTCCCAGGTCATTAGAACAAATATTCCAGACTAGGCAATCTCTTCAGTCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATAT ACAATGAAACAATTCGAGATTTATTGTCGACAAAAGATTCATCACGAACAGAGTATGGTAGTAATGGAAAGCAATATGCAATTAAACACGATGCCAATGG GAATACCCTCGTTTCCGATCTTACTGTTGTGGACGTTTGCAGTACTAGAGAGGTTTCTTTTCTTTTGGATCAGGCATCTCATAGTAGGTCTGTTGGCAAG ACTCAAATGAACGAGCAATCATCTAGAAGTCACTTTGTTTTCACATTGCGAATATCTGGTGTTAATGAGAACACAGAACAACAAGTACAAGGTGTTTTGA ATCTTATTGATCTTGCTGGGAGTGAGCGTCTTTCTAAGAGTGGCTCAACTGGAGATAGATTGAGAGAAACCCAAGCTATCAATAAAAGTTTATCATCTTT AAGCAATGTTATATTTGCATTGGCAAAGAAGGAGGATCATGTGCCGTTTAGACACTCAAAGCTTACTTATCTTCTGCAGCCGTGTTTGGGTGGAGACTCA AAGACACTGATGTTCGTAAACATATCTCCTGATCACTCTTCATCGGGTGAGTCACTTTGCTCACTCCGATTCGCATCCAGGGTTAATGCTTGTGAGATAG GTATTCCTCGACGTCAAGCCAACTTGCGGTCTTTTGAGTCTCGCTTGAGCTTGGGCTGA
AA sequence Show only first row Show all	>Potri.011G131900.2 pacid=42782188 polypeptide=Potri.011G131900.2.p locus=Potri.011G131900 ID=Potri.011G131900.2.v4.1 annot-version=v4.1 MVGTANNGRMRHAFSVVNGEEEVGLNSVPPSNAGSEYGGFEFTREDVYGLLNERMKYKNKFNYKERCENMMDYIKRLRLCIKWFQELEGGYLFEQEKLQN ALDFTESKCAEMDLMLKNKEEELNLIIVELRKSLASLQEKLSKEESEKLAALDSLAREKEARLTVEKSQASLLEEQGKIQGELQSANQRITSVSDMYKLL QEYNSSLQLYNSKLQTDLDTAHENVKRGEKEKAAIVENLSTLRGQCMSLQDQYNSCKASVDEVAKQKDTLVNEVASLRAELQQVSEDRDSLLLQVQTLTA EVVNCEELVEKSNELKEKCFSQSNQLMTLQDELEATQNKLRVSDLSVFETKTEFEAQKKLISELQNRLEDAELKIVEGEKFRKKLHNTILELKGNIRVFC RVRPLIPEDSPGADGKVVSYPTTTEALGRAIELTQNGQKYSFTFDKVFMPDASQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKSGNPEQK GLIPRSLEQIFQTRQSLQSQGWKYEMQVSMLEIYNETIRDLLSTKDSSRTEYGSNGKQYAIKHDANGNTLVSDLTVVDVCSTREVSFLLDQASHSRSVGK TQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSNVIFALAKKEDHVPFRHSKLTYLLQPCLGGDS KTLMFVNISPDHSSSGESLCSLRFASRVNACEIGIPRRQANLRSFESRLSLG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G54670		KATC, ATK3	KINESIN-LIKE PROTEIN IN ARABID...		Potri.011G131900 [exp]	0	1	ATK2.1
AT1G63430			Leucine-rich repeat protein ki...		Potri.003G124800 [exp]	2.00	0.9412
AT5G22400			Rho GTPase activating protein ...		Potri.004G201600 [exp]	2.23	0.9125
AT5G65930		PKCBP, ZWI	POTATO KINESIN-LIKE CALMODULIN...		Potri.011G146700 [exp]	4.00	0.9071
AT4G39050			Kinesin motor family protein (...		Potri.009G122100 [exp]	5.47	0.9122
AT1G74690		IQD31	IQ-domain 31 (.1)		Potri.017G079600 [exp]	5.65	0.9172
AT2G22125		POM2, CSI1	POM-POM 2, cellulose synthase-...		Potri.007G087200 [exp]	8.36	0.9118
AT4G35920		MCA1	mid1-complementing activity 1,...		Potri.005G110000 [exp]	8.48	0.8909
AT1G16860			Ubiquitin-specific protease fa...		Potri.010G252500 [exp]	9.59	0.9294
AT1G16860			Ubiquitin-specific protease fa...		Potri.008G006000 [exp]	11.35	0.9188
AT1G16860			Ubiquitin-specific protease fa...		Potri.008G006100 [exp]	12.64	0.8855

Compare expression of checked genes

Potri.011G131900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.