Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-MOR1.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G35630 2929 / 0 GEM1, MOR1 MICROTUBULE ORGANIZATION 1, ARM repeat superfamily protein (.1) AT3G28155 0 / 1 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G443200 [exp] 3625 / 0 AT2G35630 2869 / 0.0 MICROTUBULE ORGANIZATION 1, ARM repeat superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038405 [exp] 3208 / 0 AT2G35630 2987 / 0.0 MICROTUBULE ORGANIZATION 1, ARM repeat superfamily protein (.1) Lus10001216 [exp] 2286 / 0 AT2G35630 2201 / 0.0 MICROTUBULE ORGANIZATION 1, ARM repeat superfamily protein (.1) Lus10023398 [exp] 487 / 2e-157 AT2G35630 352 / 3e-110 MICROTUBULE ORGANIZATION 1, ARM repeat superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.011G153700.2 pacid=42781823 polypeptide=Potri.011G153700.2.p locus=Potri.011G153700 ID=Potri.011G153700.2.v4.1 annot-version=v4.1 ATGTCGGAGGAAGAAAAGTTGTTAAAGGAAGCAAAGAAATTGCCATGGGAAGATCGGTTGTTACACAAGAATTGGAAAGTTAGAAATGAAGCCAATATCG ATCTGGCTTCTCTCTGCGTCTCGATTTTCGATCCGAAAGACTCCAGACTTCGTGAATTCGCTCCGTTGTTTAGGAAAACGGTTGCGGATTCGAATGCGCC GGTGCAGGAAAAAGCGCTTGATGCTTTGATTGCTTTTTTGCGTGCTGCTGATGCGGATGCTGGAAGGTATGCGAAAGAAGTGTGTGATGCGATTGTGGCT AAGTGTCTTACGGGGAGGCCAAAGACTGTGGAGAAAGCGCAGGCGGCGTTTATGCTGTGGGTGGAGTTGGAAGCTGTGGAGGCCTTTTTGGATGCAATGG AGAAGGCAATCAAGAACAAAGTTTCCAAAGCGGTGGTGCCTGCAATAGATGTCATGTTTCAAGCCTTAAGTGAATTTGGAGCCAAAGTTGTGCCCCCAAA GAGGATTTTGAAGATGCTTCCAGAATTGTTTGATCACCAGGATCAAAATGTTCGTGCATCATCTAAAGGACTTACTCTTGAACTTTGTCGGTGGATTGGA AAAGACCCTGTTAAATCAATTCTGTTGGAGAAGATGCGAGATACAATGAAAAAAGAATTGGAGGCTGAGCTTGTTAATGTTACAGGAACAGCTAAGCCAT CCCGCAAGATTAGATCTGAGCAAGACAAGGAGCCAGAGCCAGAAGGAGTATCAGAAGTTGCGGGTCCTGGTCAGTCCGAAGAAGTTGCACCTGATGCTCC TCAAGAAATAGATGAGTATGATCTTATGGACCCTGTTGATATTTTATCACCCTTGGAAAAATCTGGATTTTGGGATGGAGTGAAAGCTACCAAATGGTCA GAAAGAAAGGAGGCTGTTGCAGAGCTGACGAAGCTTGCTTCCACAAAGAGGATAGCACCTGGTGATTTCTCTGAAGTTTGTCGGACATTGAAGAAGCTTA TTACAGATGTGAACATCGCTGTTGCAGTTGAAGCCATACAAGCTATTGGAAACCTTGCGCGTGGTCTAAGATCCCATTTTTCTGGCAGCTCTCGGTTCTT ATTGCCTGTTTTGCTTGAAAAACTGAAAGAGAAAAAACCTACTCTGACAGAGTCACTTACACAAACTCTCCAAGCAATGCATAAGGCTGGATGCTCAAAT CTTGCTGACATTGTTGAAGATGTCAAAACAGCAGTGAAAAATAAAGTTCCTCTTGTGCGCTCATTAACTCTAAACTGGGTGACATTTTGTATTGAAACCA GTAATAAAGCTGTTATTCTGAAGGTGCATAAGGATTATGTCCCTATCTGTATGGAGAGCCTCAATGATGGGACTCCTGATGTGAGGGATTCTGCCTTTTC AGTGTTAGCGGCAGTAGCTAAGATGGTTGGCATGAGGCCTTTGGAGAGGTCACTGGAGAAACTTGATGATGTGAGAAGAAAGAAGCTGTCCGAAATGATA GCAGGTTCTGGGGATGGTGTGGCAGCTGTGGCAACCTCAGGTACTGTCCAAACTGCTCGTGGAAGTATGTCTTCTGTAGAGACATCAGAAAGCTCATTTG TTAAGAAGTCAGCGGCAAGCATGCTTTCTGGGAAGAGGCCTGCTCCAGCAGCTCCTGCTAACAAAAAGGCGGCACCTACAAAATCAGGGGCCAGCAAGAA AGTTGATGGAGCTGGGCGACCAGAAACTTCACGAGCACTTGAACCACCTGAAGATGTTGAGCCAGCAGAGATGAGTCTTGAAGAAATTGAAACCAGATTA GGCTCTCTCATTCAAGCAGATACCATTTCTCAACTGAAGAGTGCAGTATGGAAAGAGCGGCTGGAAGCAATATCTTCATTGAAAGAACAAGTGGAGGGGT TGCAGAACTGTAATCAATCTGTGGAGATTTTGATTCGTTTACTCTGTGCTATTCCTGGCTGGAATGAGAAAAATGTTCAGGTTCAGCAACAGTTCATTGA AGTCATTACTTACCTAGCTTCAACTGCATCAAAATTTCCAAAGAAATGTGTAGTGCTCTGCCTTCTAGGTATTAGTGAACGGGTAGCGGATATTAAAACC AGAGCTTATGCTATGAAGTGCCTTACTACTTTCACGGAAGCAGTAGGTCCAGGATTCGTTTTTGACCGACTTTACAAAATTATGAAAGAGCACAAGAATC CAAAGGTTCTTAGTGAGGGAATACTCTGGATGGTTTTGGCAATTGATGACTTTGGTGTGTCACATTTGAAGCTTAAGGATTTAATTGACTTCTGTAAAGA TACTGGGCTACAGTCCAGTGTAGCTGCTAGCAGAAATGCAACTATCAAACTTTTGGGTGCCTTACATAAGTTTGTTGGTCCAGATATTAAAGGTTTTCTG GCTGATGTCAAACCTGCACTGCTCAGTGCACTTGATGCGGAGTATGAAAAAAATCCTTTTGAGGGTGCTTCTGCTATTCCAAAGAAAACAGTTAGGACGT CAGAGTCCATGACTTGTGTTTCTGGTGGTGGGCTGGATAGCCTGCCACGTGAAGATATTAGTGGAAAGGTAACACCTACTCTGATCAAGAGCTTGGAAAG TCCTGATTGGAAGGTTCGACTTGAGTCAATTGAAGCTGTCAATAAAATTTTGGAGGAGGCTAATAAACGCATTCAACCAAATGGAACTGGTGAATTATTT GGTGCCCTTAGAGGGCGTCTGTATGACAGCAATAAAAATCTAATCATGACAGCTTTGACTACCATTGGTGGTGTTGCTTCTGCTATGGGACCAGCTGTCG AGAAGTCAAGCAAGGGTGTTCTGTCAGATATTTTGAAATGTCTTGGGGACAATAAGAAACATATGAGGGAATGTGCTCTGAATACATTAGATTCTTGGGT TGCTGCTGTTCATCTTGATAAAATGATTCCTTACATCACAGCTGCTTTATTTGAAAGTAAGCTTGGTGCTGAAGGCCGCAAGGACCTTTTTGATTGGCTT TCAAAGCAACTTTCTGGATTAAGCGAGTTTCCTGATGCCATACATTTGCTGAAACCTGCTGGCTCTGCTATGACGGATAAATCAGCAGATGTTCGAAAAG CAGCTGAAGCATGCATCTCTGAGATTTTGAGAGTGTGTGGACAAGAAATGATTGAGAGGAATCTGAAAGATATTCATGGGCCAGCCTTAGCTCTCGTTCT CGAACGTGTGAGGCCTGCTAGTGTTTATCAAGAGTCATTTGAATCAACAAAAACAATTTCAATGGGTCCATCATCCAAAACAAGCTCAAAGGTTGGGAAA GCTGCTTCCAATGGCATATCAAAGCATTCAAATAGATCTATATCTTCGAGAGTCATACCAACAAAAGGGTCAAAGCCAGAGCCAGCGATGTCTATTCAGG ACAGAGCTGTTCAGTCTCAAGCATTATTGAATGTCAAGGACTCAAACAAGGAGGATAGGGAAAGAATGGTAGTCCGAAGGTTTAAGTTTGAAGAGCCACG GATGGAACAAATTCAAGATCTTGAGGGTGATATGATGAAGTACTTAAGAGAGGATCTGAACAGGAGGCTTTTAAGTCTGGATTTTAAGAAACAAGTTGAT GGGCTAGAGATGTTACAAAAGGCCCTTCCATCCATTGGAAATGAAATAATTGAAGTTCTGGACATACTCTTGAAGTGGTTTGTTTTGCAGTTTTGTAAAT CTAACACAACGTGCCTGTTAAAGGTTTTGGAATTCCTCCCTGCACTTTTTGACTTGCTCCGGGATGAGGCCTACACTTTGAGTGAATCAGAAGCAGCTAT ATTTCTTCCATGCTTGATTGAAAAGTTGGGGCATAACATTGAGAAAGTGCGGGAAAAAATGCGTGAGCTAGCCAAACAAATTTTGCATGCGTATTCAGCA ACAAAATCTTTCCCGTACATTCTGGAGGGTTTGCGCTCTAAGAACAACCGTACTCGGATAGAGTGTGCAGATCTAGTTGGTTTCTTGATTGATCAGCACG GGGCTGAGATAAGTGGACAGTTAAAGTCATTGCAAATTGTTGCAAGCTTGACTGCAGAACGTGATGGTGAAATTAGAAAAGCTGCATTAAATGCTCTGGC TACTGGTTATAAGATTCTTGGTGAGGACATTTGGAGATATCTTGGGAAGCTAACAGATGCTCAGAAAAGCATGATTGATGATAGATTTAAGTGGAAGGTT CGAGAGATGGAAAAAAGGAAAGAAGGTCGCCCTGGTGATGCTAGAGCTGCTTTAAGGCGCTCTGTTCGGGAAAATGGGTCTGATATAGCAGAACAGAGTG GGGAAGTTTCACAATCAGTCTCTGGCCCTATATTAGCCAGGAAAAACTTTGGTACTCAGGAGCTTCAGGTGGAGAGACATATAATGCCCCGTGCACTCAC TAGTGCCAGTGGCCCCACGGACTGGAATGAAGCTCTGGACATCATTTCTTTTAGTTCCCCAGAGCAGTCAGTTGAAGGCATGAAAGTTGTTTGCCATGAG CTGGCACAGGCTACCAGTGATGAAGAAGGAAGTGTGATGGATGAACTAGTGAAAGATGCAGATAGACTTGTTTCATGCTTGGCAAACAAGGTAGCAAGGA CATTTGACTTCAGTTTGACTGGAGCATCATCACGGTCTTGTAAATATGTTCTTAACACACTCATGCAGACTTTTCAAAATAAAACACTTGCTCATGCTGT CAAAGAGAGCACTCTTGACAGTCTGATAACGGAGCTTCTACTTTGGCTTTTGGATGAAAGGGTCCCACATATGGATGATGGCAGCCAACTCCTAAAAGCA TTGAATGTGCTGATGCTTAAGATACTGGATAATGCGGATCGAACATCATCCTTTGATGTCTTGATTAATCTGTTGCGACCTTTGGATCCCAGCAGGTGGC CTTCACCTGCATCAACTGAGACCTTTGCCATAAGGAACCAGAAGTTCTCTGATCTTGTTGTAAAATGCCTCATCAAACTTACAAAGGTTCTTCAAAGCAC TATATATGATGTTGATCTTGACCGCATCCTTCGGAGCATCCATATTTACCTCCAAGAATTGGGAATGGAAGAAATCAGGAGAAGAGCGGGAGCGGATGAC AAGCCTTTGCGTATGGTGAAAACTGTTCTCCATGAACTTGTTAAGCTCCGTGGAGGTTCCATAAAGGGTCACCTATCCATGGTTCCTATTGACATGAAAC CTCAGCCAATTATTCTTGCCTACATTGATCTTAATCTTGAGACTTTAGCTGCAGCAAGAATGTTGACCTCAACAGCCCCCGTGGGCCAAAATCATTGGGG TGATTCTGCAGCCAACAATTCATCACCTGCCACGCATTCTGCCGAGGCTCAGTTGAAGCAAGAACTCGCTGCCATATTCAAGAAAATTGGTGACAAACAA ACCTGCACCATTGGTTTATATGAGCTCTATCGCATTACTCAGTTATATCCCAAGGTTGATATATTTGCTCAGCTCCAAAATGCTAGCGAGGCATTTCGCA CTTACATTAGAGATGGTCTAGCTCAGATGGAGAAGAATACTGCTGCTGGAAGGACGCCTTCTAGTTTGCCTATGTCAACCCCCCCTCCATCCGCTCCAAA TGTTTCTTCCCCTGATTTGCAGCCTCTTTCCCCTGTTCATACAAACTCCTTAAATGATTCAAAACCTTTACATGCTAAACCAGAAGCGACAAACTTTCAT CTACCTCCCTCATATTCTGAAGATGGTGCCATTTTATCTAGAGGTTTTGTCTCGGAGAATTCTTTGGGTGACCAAAGAAATGAGAAGCTTATTAGTGGAG TAACCAGCGGGACATTAGATGCAATTAGGGAAAGGATGAAGAGTATGCAGTTAGCTGCCACTGCTGGGCTTCCTGATTCAGGAAGCAGGCCACTGATGTC TGTGAATGATAATTTAAATAATGGACTTTCTAGTCTGATTCTTCATGCGCCAGACTCTGCAGGCATGGAGAATCCTGTGCTTGGCGGGGTTCTTCCTTTG GATGAGAAGGCGTTGTCTGGGCTTCAAGCCCGGATGGAGAGACTTAAAAGTGGATCTCTTGAACCTCTGTAG
AA sequence Show only first row Show all	>Potri.011G153700.2 pacid=42781823 polypeptide=Potri.011G153700.2.p locus=Potri.011G153700 ID=Potri.011G153700.2.v4.1 annot-version=v4.1 MSEEEKLLKEAKKLPWEDRLLHKNWKVRNEANIDLASLCVSIFDPKDSRLREFAPLFRKTVADSNAPVQEKALDALIAFLRAADADAGRYAKEVCDAIVA KCLTGRPKTVEKAQAAFMLWVELEAVEAFLDAMEKAIKNKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFDHQDQNVRASSKGLTLELCRWIG KDPVKSILLEKMRDTMKKELEAELVNVTGTAKPSRKIRSEQDKEPEPEGVSEVAGPGQSEEVAPDAPQEIDEYDLMDPVDILSPLEKSGFWDGVKATKWS ERKEAVAELTKLASTKRIAPGDFSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRSHFSGSSRFLLPVLLEKLKEKKPTLTESLTQTLQAMHKAGCSN LADIVEDVKTAVKNKVPLVRSLTLNWVTFCIETSNKAVILKVHKDYVPICMESLNDGTPDVRDSAFSVLAAVAKMVGMRPLERSLEKLDDVRRKKLSEMI AGSGDGVAAVATSGTVQTARGSMSSVETSESSFVKKSAASMLSGKRPAPAAPANKKAAPTKSGASKKVDGAGRPETSRALEPPEDVEPAEMSLEEIETRL GSLIQADTISQLKSAVWKERLEAISSLKEQVEGLQNCNQSVEILIRLLCAIPGWNEKNVQVQQQFIEVITYLASTASKFPKKCVVLCLLGISERVADIKT RAYAMKCLTTFTEAVGPGFVFDRLYKIMKEHKNPKVLSEGILWMVLAIDDFGVSHLKLKDLIDFCKDTGLQSSVAASRNATIKLLGALHKFVGPDIKGFL ADVKPALLSALDAEYEKNPFEGASAIPKKTVRTSESMTCVSGGGLDSLPREDISGKVTPTLIKSLESPDWKVRLESIEAVNKILEEANKRIQPNGTGELF GALRGRLYDSNKNLIMTALTTIGGVASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECALNTLDSWVAAVHLDKMIPYITAALFESKLGAEGRKDLFDWL SKQLSGLSEFPDAIHLLKPAGSAMTDKSADVRKAAEACISEILRVCGQEMIERNLKDIHGPALALVLERVRPASVYQESFESTKTISMGPSSKTSSKVGK AASNGISKHSNRSISSRVIPTKGSKPEPAMSIQDRAVQSQALLNVKDSNKEDRERMVVRRFKFEEPRMEQIQDLEGDMMKYLREDLNRRLLSLDFKKQVD GLEMLQKALPSIGNEIIEVLDILLKWFVLQFCKSNTTCLLKVLEFLPALFDLLRDEAYTLSESEAAIFLPCLIEKLGHNIEKVREKMRELAKQILHAYSA TKSFPYILEGLRSKNNRTRIECADLVGFLIDQHGAEISGQLKSLQIVASLTAERDGEIRKAALNALATGYKILGEDIWRYLGKLTDAQKSMIDDRFKWKV REMEKRKEGRPGDARAALRRSVRENGSDIAEQSGEVSQSVSGPILARKNFGTQELQVERHIMPRALTSASGPTDWNEALDIISFSSPEQSVEGMKVVCHE LAQATSDEEGSVMDELVKDADRLVSCLANKVARTFDFSLTGASSRSCKYVLNTLMQTFQNKTLAHAVKESTLDSLITELLLWLLDERVPHMDDGSQLLKA LNVLMLKILDNADRTSSFDVLINLLRPLDPSRWPSPASTETFAIRNQKFSDLVVKCLIKLTKVLQSTIYDVDLDRILRSIHIYLQELGMEEIRRRAGADD KPLRMVKTVLHELVKLRGGSIKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTAPVGQNHWGDSAANNSSPATHSAEAQLKQELAAIFKKIGDKQ TCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGLAQMEKNTAAGRTPSSLPMSTPPPSAPNVSSPDLQPLSPVHTNSLNDSKPLHAKPEATNFH LPPSYSEDGAILSRGFVSENSLGDQRNEKLISGVTSGTLDAIRERMKSMQLAATAGLPDSGSRPLMSVNDNLNNGLSSLILHAPDSAGMENPVLGGVLPL DEKALSGLQARMERLKSGSLEPL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G35630		GEM1, MOR1	MICROTUBULE ORGANIZATION 1, AR...		Potri.011G153700 [exp]	0	1	Pt-MOR1.1
AT4G39050			Kinesin motor family protein (...		Potri.009G122100 [exp]	1.41	0.9174
AT2G35110		NAPP, GRL, NAP1	NCK-ASSOCIATED PROTEIN 1, GNAR...		Potri.015G124500 [exp]	2.00	0.8980
AT5G65930		PKCBP, ZWI	POTATO KINESIN-LIKE CALMODULIN...		Potri.001G455300 [exp]	2.82	0.8903
AT2G35630		GEM1, MOR1	MICROTUBULE ORGANIZATION 1, AR...		Potri.001G443200 [exp]	3.31	0.8825	MOR2,Pt-MOR1.2
AT2G45540			WD-40 repeat family protein / ...		Potri.002G150000 [exp]	3.46	0.8971
AT3G06550		RWA2	REDUCED WALL ACETYLATION 2, O-...		Potri.010G148500 [exp]	9.16	0.8820
AT1G04650			unknown protein		Potri.001G053000 [exp]	10.95	0.8536
AT5G60720			Protein of unknown function, D...		Potri.009G009500 [exp]	12.84	0.8967
AT1G52150	HD	ATHB15, ICU4, C...	INCURVATA 4, CORONA, Homeobox-...		Potri.001G188800 [exp]	13.00	0.8795	ATHB.12
AT3G54800			Pleckstrin homology (PH) and l...		Potri.008G038800 [exp]	13.85	0.8172

Compare expression of checked genes

Potri.011G153700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.