Potri.012G020000 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.012G020000.4 pacid=42782641 polypeptide=Potri.012G020000.4.p locus=Potri.012G020000 ID=Potri.012G020000.4.v4.1 annot-version=v4.1
ATGGCGGAAGACGAAGTGCTTTACGAGACGCGTCTTCACATCTCCAGACCTTATACTTCCAATTACCCTCCTCTCCTACACTCCAACAAGGTCAATCAAG
GCGGTTTCTTGTCCATAATCAAAGAGAAATTGAGTGATTATAGGAATTATAATTCAAAATCATCAACAGAAATTAGGAAAAATCTATCGCTGTTTATATC
TACACGAGGTGATTACGTTGCTGTAGCTAGTGCTAATCAAATTACGATTTTGTCCAAAGAGAATGATTATCAGCAACCGCACGGAAGCTTCACTTGTAGA
GGTGGTGGTGTGTTCACGAGCGGAGTGTGGTCTGAATTTCATGGTGTCTTAGGAGTAGTAGATGATAGTGATACGGTTTATTTGATCAAAGTGAATGGGG
AAGAGATTATGAGAATTAGTAAGCGGCAGTTGAGAGCAAGTTCGTCGATAGTAGGATTGATTCCACAGGATGCTGATGATAATGATGCGCAGCGGTCTTG
TTTGTGTAGATTTGTTGTTATTACAGCAGATGGATGTCTTCATTTGATTGAGATGAGTAAGGAGCCAAGTGCTTCTGTTTTAAATAGTGGGTTGAAGTCG
CTGGGGAAGTTTCCAAAGGATGTTTTCTGCTCTGACTATAGTTCGGAATGTTCCTTGCTTGTTGTTGTTGGTAGTGCAGTTGGTATCTCGCAATCGTCTG
TTGAAAATGCTGCTGGATCTTGTCTTCTTTCTCTTTGGTGTAGAAGTCGAAACTTAGATTTGGAACCATTGATTTCTATTCAGTTCGAAGGCTTGTATTC
CAAATCAAAAGATGCCATACTATCATGTCCAAAGGTGCTAATTTCACCACAAGGTAAGTTTGTTGCCACTTTAGATATAACAGGACGCTTGCACATTTTC
AAGATGGATAAAGAAAGTCGATCACTTGTGAGTTTTGCTTGTGAAGAGCAATTACGTTCACAAGGAACCAGTAACATAACAAATGGACAGAATGAGCTTT
TAAATGATATTGTGGATTTTACTTGGTGGTCTGACCGCATCATGACTCTTGCAAAACGTGGAGGCATTTTGGCCATGCTTGATATTGTTACTGGCTTAAA
GTTTCAAGAGCACAACCATCTATATTCAATGCTTGTTCTGGATAGGATACAGCAGTTTCAAGGCCGCATATTTGTTTTAGATAGCAAAGTTCCAAGTAAA
CCTCATAGAGAGTCAGGTAATGTGTACAATGTAGAGCAGGTCACAGGTAGCAGAAGTGATCAACTTGATGTTTCCCAGTTGCACTGGAGCTTGATCTCAC
TGTCAAAGAGATCTGTTCCTGAAATGTATAATATCTTAATTAGTAACTGTAAATATCAAGCTGCCTTGGACTTTGCCAATCGTCATGGCTTGGACAGAGA
TGAAGTTTTAAAATCTCAGTGGCTGCACTCTAGCCAAGGAAAAGATGGTATTAACATGTTTTTGTCCAATATCAAGGATCACAGTTTTGTGCTTTCTGAA
TGTGTTGATAAGGTTGGACCAACAGAAGATGCGGTAAAAGCTCTACTGTCATATGGGCTGCAAGTGACTGATCAGTTCCGTTTTTCGGAATCAGAAGCTG
ATGAAGGGAGCCAGATCTGGGATTTTCGTATGGCTAGACTTCAGCTGTTACAATTCAGGGACAGGCTAGAGACCTATATGGGGATAAACATGGGCAGGTT
TTCTGTACAGGAATATCGCAAATTTCGTATTATACCTGTTGGTGAAGCTGCCATAACACTTGCTGAAAGTGGGAAAATTGGGGCCCTAAACCTCCTCTTC
AAGCGTCATCCTTATTCACTATCTCCTTCATTGTTGAAAATATTAGCTGCTATTCCTGAAACTGTTCCTCTTCAAACCTATGGGCAGCTTCTTCCTGGGA
GATCTCCTCCCCCAAGAATTGCTCTTAGGGAAGAAGATTGGGTAGAATGTGAGGAAATGGTTAACTTTATCAATAGGCTACCAGAGAATCATGAGATTGG
TACCCAGATCCAAACTGAGCCCATTGTCAAGCGGCGCCTTGGTTATCTTTGGCCGTCATCTAGTGAACTCTCTGAGTGGTACAAGAACAGAGCTAGAGAT
ATTGATAGCTTTAGTGGCCAGCTTGACAACTGCATCGACTTGATTGATTTGGCTTGCCGCAAAGGCATCTATGAGTTACAGAAGTTTCATGAGGATATTT
TATTGTTGCACCAGCTAATTTATTCTGATGAAAATGATGTTGACGCATGTTCTAATATGAGTCTTATCTCCTGGGAACAGTTATCTGATTACGAAAAATT
CAGAATGATGCTTAAGGGAGTGAAAGAGGAAAATGTGGTAAAGAGGTTGCATGATAAGGCTATTCCATTTATGAGAAATAGGTTTCACAACATGACCTAT
TTTACTCAAGATCAGGATACAGATTGCCATTTTCCTTCGCATGAAAATGATTCATTTGTGGTAAAATGGCTAAAGGAAATTGCATTGGAGAATAAACTAG
ACACATGCTTGATGGTTATTGAGGAAGGATGCAGGGAATTGCATATGAATGGTTTCTTCAAGGATGAGATTGAGGCTGTAGATTGTGCTTTGCAGTGCAT
TTATTTGTGCACTGTTACAGATAGATGGAGTGTAATGGCTGCCTTATTGTCAAAACTCCCACAGAAGCAAGATGTCGGTATTTCTATTGAGCACCTCGAG
AAACGACTGAAGCTTGCTGAAGGTCATATTGAAGCAGGGAGGCTTCTGGCACTGTACCAGGTTCCAAAGCCAATGAATTTCTTCCTTGAGGCCCATGCAG
ATGAAAAAGGTGTTAAACAGATTCTTCGTCTTATACTGTCAAAATTTGTTCGCAGACAGCCAGGTCGATCAGATAATGATTGGGCAAACATGTGGCATGA
TTTGCAATGCTTGCGAGAGAAGGCTTTTCCTTTCCTTGACCCAGAGTATATGCTAGTGGAATTCTGCAGAGGACTGCTGAAAGCTGGGAAATTTTCACTT
GCTAGAAATTATCTGAAAGGTACAAGTTCAGTAGCCTTGGCATCAGAGAAAGCAGAAAATCTTGTTATTCAAGCTGCACGGGAGTACTTTTTCTCAGCTT
CAAGTTTGTCTTGCTCTGAAATCTGGAAGGCTAAGGAATGCCTTAATTTATTTCCAAGTAGCAGAAATGTTCAGACAGAGGCTGATTTAATTGATGCTCT
CACTGTTAAACTTCCTTACCTTGGAGTGACTCTACTTCCTTTGCAATTTAGGCAAATAAAGGATCCTATAGAGATCATCAAAATGGCAATCACTAGCCAA
GCTGGAGCTTATCTACATGTTGATGAACTCATTGAGGTTGCCAAACTTCTTGGGTTGAACTCTTCAGAAGATATATCTACTGTTCAGGAAGCTATTGCTA
GAGAAGCTGCAGTGGCAGGTGATCTACAATTGGCATTTGATCTCTGTCTTGTTCTGGCCAAAAAAGGGCATGGTCATGTTTGGGATCTATGTGCTGCGAT
AGCCAGGGGTCCTGCCCTTGAAAATATTGATATAGGCTCTCGAAAGCATTTACTAGGTTTTGCTTTGAGTCATTGTGATGAGGAATCTATTGGTGAGTTG
CTTCATGCGTGGAAAGATCTTGACATGCAAGGCCAGTGTGAGACACTGTCAATCTTGACTGGGACAAGTCCTTCAAGCTTCTCAGATCAAGGTTCGTCTA
TAACATCACCCCCAGCCTATGAAGAAACAATTGATCTTAAGGATTACTCTGAACTGGACGGAGGAGCAAGCAGTGGAGATCGAGAAGTTTGTTTCAGTAA
CATTAAAAACACACTTTCTTTTGTTACTAAAAACTGTCGTGTGGATAGTGGAACTGATCTGGAATCTTTTTTGTGGGAAAATGGAAAACTTGTATCTTTT
GCCTCTATTCAACTTCCATGGTTGCTTGAATTGAGTAAGAAAGCAGATAATGGTAAGAAATTTTCTACCTTTATTCCTGGTAAGCATTACGTTAGCATAA
AAACACAAGCTGTGGTAACTATCCTGTCGTGGCTGGCAAAAAATGATTATGCTCCCAGAGATGATGTTATCGCCTCACTGGCAAAATCAATCATAGAACC
ACCTGTTACAGAAGAGGAGGATATCATGGGGTGCTCTATCTTATTGAATCTCGCGGATGCCTTTAGTGGAGTAGAAATAATAGAAGAGCAGCTAAGGATA
CGGGAGAATTACCAAGAAATTTGTAGCATCATGAATGTGGGAATGACATACAGTTTATTACATAACTCTGGAGTTGAGTGCAAGGGTCCGGCTCAGAGGA
GAGAGCTGCTGCTGAGGAAGTTTAAAGAGAAGCACAAACCACCTAGTTCAGATGAAATGACCAAAATTGATGTACAGTCCACGTTTTGGAGGGAATGGAA
GTTTAAATTGGAAGAAAAAAAACATGTAGCTGAACAATCTAGAGTGTTGGAGAAAATCATTCCTGGAGTTGAAACTGGGCGTTTTCTGTCTGGTGACCTT
GACTACATTAAGAGTGCTATTTTCTCCTTGATTGAATCAGTAAAGTTCGAAAAGAAGCACATTATAAAGGATGTGTTAAGATTGGTCGATGCCTATGGCT
TAAATCACACTGAGGTGCTACTAAGGTATCTTAGTTCTATCCTTGTTTCTGAGGTTTGGACTGATGATGATGATGTTAAGGCTGAAATTTCAGAGGTCAA
AGGAGAAATAATTAGCTTTGGTTCTGAAACCATCAAAACTATTTCCTTGGTTGTATACCCTACAATTGATGGGTGCAACAAGCAACGCCTTGCTTGTATA
TATGGCCTCCTCTCTGACTGCTACTTGTGGCTGGGAGAATCCAAAAAATCATCGTCAACAGCACATCCAAATTCACCAAATTTGTCTGCTCTTGATGTAG
CTCGTTTGTACAAGGTCTTTGAGCAAGAATGTCATAGAGTTTCTTTTATCAAGAACTTAGACTTCAAGAATGTTGCTGGATTAGATGGTTTGAATTTGCA
GTCTTTCAAAAATGAAGTCTTTTCACATGTTAATGAATCTAGCTTGGAAGCCTTGGCAAAAATGGTACAAACATTGGCCAGTATCTATGCTGATTCACTG
CCTGAAGGTCTCATAGTGTGGCAAGATGTCTACAAACATTACACAATGAGTTTATTGACTACTTTGGAAAGTAGAGTTAGAAAAGAGTGTGATGTTCAAA
ATGCTGAAAGATTTCAGGAATTTATGAGTCAACTGGAGCAAACCTATGATTTTTGCAGAACATATATGAGGCTTTTGTCACATTCAGATTCTTTAGATAT
TATGAAGCGATACTTCACAGTGATTATACCCCTGCACAGTTCTCATGAGATTATACCTGATAACTCAACATGGCAGGATTGCGTCATTGTTCTTTTGAAC
TTCTGGCTTAAATTGACAGAAGAAATGCAGGAGATAGCATTAGATGAGAGTTCAGTAGGAACACTGAGGTTTGATCCAGAGTTCTTATCAAGTTGCCTGA
AGGTTTTTATGAGGATGGTGATGGAGGACAGTGTTTCACCAAGTCAGGCCAGGGGCACCGTAATTGGTTATGCAAGTTCTGGTTTAATTGGAGATTTTTC
TGTTGAGATACCAATTTTCTGCAGAGCTATGTTATATTCTGGTTGCGGGTTTGGAGCCATTTCAGAAGTATTCTTGGAATCAATGTCAATCTGCGCCATC
AGCTCAGCTTCAACTGCTAAGAATGAATCCCTGGATCTTCCTCATCTCTATGTAAATATGTTGGAGCTGATTCTAAGAAACTTGGTTGGTGGATCCCATG
AACACCAGAATCTGTATCATTTGTTATCATCTCTGAGTAAGTTGGAAGGTCAAATGGAGAATTTGCAAAGAGTCAGGCATGTAGTTTGGGAAAGAATGGC
CCAATTCTCTGATAATTTGGAGCTCCCAAGCCATGTTCGAGTATATGTTCTAGAGATTATGCAGTTCATCACAGGTAGAAGCATTAAGGGTTTCTCCACA
GAGCTAAATTCTAATCTTTTACCATGGGAAGGATGGGATGGGTTGCTCTCTACTGGTAAAAAGAGCAACCCTTCTGCAAATCAGGGGTCACCTGATCATA
CAGATAATTCTAGCAGGTTTACAAGTACACTGGTTGCCCTCAGATCATCTCAGCTCGCATCAGCCATATCCCCAAGCATAGCAATTACCCCTGATGATCT
CTTGAATGCTGAGACTGCAGTCTCTTGCTTCTTGAAATTGTGTGAATCTTCCAGTACAGAGCCTCATTTCGATGCTTTGATAGGCATTTTAGAAGAGTGG
GAAGGGTTTTTTGTAACTGCAAAAGATGAGGTAGATACCACAGAAGCAACAGAAACAGGAAATGACTGGAATAATGATGACTGGGATGAAGGATGGGAGA
GCTTTCAGGAAGTAGAAGCTCTGGAGAAAGAGAAGCCAGAGAATTCCAATCACGTTCATCCTTTACATGTCTGTTGGATGGAAATTTTCAAAAAGCTTAT
CACGTTGTCCAAGTTTAAGGATGTGCTAAGACTGATTGACTGTTCCCTATCAAAATCTTATGGAATATTGCTTGATGAAGATGATGCGAGGAGCTTGAGT
CACACTGTGCTTGAGAAAGATTCTTTTATGGCTCTAAAAATGGGGCTTCTTCTGCCTTATGAAGCAATACAGTTGCAGTGTTTGAATGTAGTTGAAGACA
AGCTGAAACAAGGAGGGATCTCAGGCGTGCTTGGCAGGGACCATGAGGTCTTAATGCTCGTGTTATCTTCTGGGGTTATATCAAATATAATCACCAAACC
CTCATATGGCACCACTTTCTCATATCTCTGCTATGTGGTTGGGAATTTCTCGCGCCAGAGTCAGGAAGCCCAGTTATCAACAATCACAAACAAGGGAGCA
AATGAACGTGTAAACATAGAGAAAGATGTGTTGTTACTTTTCATAAGAATCATGTTCCCCTGCTTCATATCAGAGCTTGTGAAGACAGATCAGCAGATCC
TAGCTGGATTTCTCATTACAAAATTTATGCACACAAATCCTTCTTTCAGTCTCATAAACACCACAGAGTCTAGTCTTAGTAGGTACTTGGAGAGGCAGCT
CCATGCACTACAGCAAGGCGACTACTTTTCCCTCGAGGAGATAAGTTCCTGTGAAATGTTCAGGAATACAGTCTCCAGACTGACGAACAAGTTGGGAGAT
GAGATTCGATCGGCATTGCCATTGCTTTCTAGTAATGCTAGATGA
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AA sequence
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>Potri.012G020000.4 pacid=42782641 polypeptide=Potri.012G020000.4.p locus=Potri.012G020000 ID=Potri.012G020000.4.v4.1 annot-version=v4.1
MAEDEVLYETRLHISRPYTSNYPPLLHSNKVNQGGFLSIIKEKLSDYRNYNSKSSTEIRKNLSLFISTRGDYVAVASANQITILSKENDYQQPHGSFTCR
GGGVFTSGVWSEFHGVLGVVDDSDTVYLIKVNGEEIMRISKRQLRASSSIVGLIPQDADDNDAQRSCLCRFVVITADGCLHLIEMSKEPSASVLNSGLKS
LGKFPKDVFCSDYSSECSLLVVVGSAVGISQSSVENAAGSCLLSLWCRSRNLDLEPLISIQFEGLYSKSKDAILSCPKVLISPQGKFVATLDITGRLHIF
KMDKESRSLVSFACEEQLRSQGTSNITNGQNELLNDIVDFTWWSDRIMTLAKRGGILAMLDIVTGLKFQEHNHLYSMLVLDRIQQFQGRIFVLDSKVPSK
PHRESGNVYNVEQVTGSRSDQLDVSQLHWSLISLSKRSVPEMYNILISNCKYQAALDFANRHGLDRDEVLKSQWLHSSQGKDGINMFLSNIKDHSFVLSE
CVDKVGPTEDAVKALLSYGLQVTDQFRFSESEADEGSQIWDFRMARLQLLQFRDRLETYMGINMGRFSVQEYRKFRIIPVGEAAITLAESGKIGALNLLF
KRHPYSLSPSLLKILAAIPETVPLQTYGQLLPGRSPPPRIALREEDWVECEEMVNFINRLPENHEIGTQIQTEPIVKRRLGYLWPSSSELSEWYKNRARD
IDSFSGQLDNCIDLIDLACRKGIYELQKFHEDILLLHQLIYSDENDVDACSNMSLISWEQLSDYEKFRMMLKGVKEENVVKRLHDKAIPFMRNRFHNMTY
FTQDQDTDCHFPSHENDSFVVKWLKEIALENKLDTCLMVIEEGCRELHMNGFFKDEIEAVDCALQCIYLCTVTDRWSVMAALLSKLPQKQDVGISIEHLE
KRLKLAEGHIEAGRLLALYQVPKPMNFFLEAHADEKGVKQILRLILSKFVRRQPGRSDNDWANMWHDLQCLREKAFPFLDPEYMLVEFCRGLLKAGKFSL
ARNYLKGTSSVALASEKAENLVIQAAREYFFSASSLSCSEIWKAKECLNLFPSSRNVQTEADLIDALTVKLPYLGVTLLPLQFRQIKDPIEIIKMAITSQ
AGAYLHVDELIEVAKLLGLNSSEDISTVQEAIAREAAVAGDLQLAFDLCLVLAKKGHGHVWDLCAAIARGPALENIDIGSRKHLLGFALSHCDEESIGEL
LHAWKDLDMQGQCETLSILTGTSPSSFSDQGSSITSPPAYEETIDLKDYSELDGGASSGDREVCFSNIKNTLSFVTKNCRVDSGTDLESFLWENGKLVSF
ASIQLPWLLELSKKADNGKKFSTFIPGKHYVSIKTQAVVTILSWLAKNDYAPRDDVIASLAKSIIEPPVTEEEDIMGCSILLNLADAFSGVEIIEEQLRI
RENYQEICSIMNVGMTYSLLHNSGVECKGPAQRRELLLRKFKEKHKPPSSDEMTKIDVQSTFWREWKFKLEEKKHVAEQSRVLEKIIPGVETGRFLSGDL
DYIKSAIFSLIESVKFEKKHIIKDVLRLVDAYGLNHTEVLLRYLSSILVSEVWTDDDDVKAEISEVKGEIISFGSETIKTISLVVYPTIDGCNKQRLACI
YGLLSDCYLWLGESKKSSSTAHPNSPNLSALDVARLYKVFEQECHRVSFIKNLDFKNVAGLDGLNLQSFKNEVFSHVNESSLEALAKMVQTLASIYADSL
PEGLIVWQDVYKHYTMSLLTTLESRVRKECDVQNAERFQEFMSQLEQTYDFCRTYMRLLSHSDSLDIMKRYFTVIIPLHSSHEIIPDNSTWQDCVIVLLN
FWLKLTEEMQEIALDESSVGTLRFDPEFLSSCLKVFMRMVMEDSVSPSQARGTVIGYASSGLIGDFSVEIPIFCRAMLYSGCGFGAISEVFLESMSICAI
SSASTAKNESLDLPHLYVNMLELILRNLVGGSHEHQNLYHLLSSLSKLEGQMENLQRVRHVVWERMAQFSDNLELPSHVRVYVLEIMQFITGRSIKGFST
ELNSNLLPWEGWDGLLSTGKKSNPSANQGSPDHTDNSSRFTSTLVALRSSQLASAISPSIAITPDDLLNAETAVSCFLKLCESSSTEPHFDALIGILEEW
EGFFVTAKDEVDTTEATETGNDWNNDDWDEGWESFQEVEALEKEKPENSNHVHPLHVCWMEIFKKLITLSKFKDVLRLIDCSLSKSYGILLDEDDARSLS
HTVLEKDSFMALKMGLLLPYEAIQLQCLNVVEDKLKQGGISGVLGRDHEVLMLVLSSGVISNIITKPSYGTTFSYLCYVVGNFSRQSQEAQLSTITNKGA
NERVNIEKDVLLLFIRIMFPCFISELVKTDQQILAGFLITKFMHTNPSFSLINTTESSLSRYLERQLHALQQGDYFSLEEISSCEMFRNTVSRLTNKLGD
EIRSALPLLSSNAR
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.012G020000 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.