Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ACP5.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G17790 437 / 7e-155 ATACP5, ATPAP17, PAP17 purple acid phosphatase 17 (.1) AT1G25230 395 / 2e-138 Calcineurin-like metallo-phosphoesterase superfamily protein (.1) AT1G14700 394 / 3e-137 PAP3, ATPAP3 purple acid phosphatase 3 (.1.2) AT2G01890 390 / 2e-136 PAP8, ATPAP8 purple acid phosphatase 8 (.1.2) AT2G01880 365 / 1e-126 PAP7, ATPAP7 purple acid phosphatase 7 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G031400 [exp] 589 / 0 AT3G17790 473 / 1e-168 purple acid phosphatase 17 (.1) Potri.010G101900 [exp] 432 / 1e-152 AT3G17790 443 / 6e-157 purple acid phosphatase 17 (.1) Potri.008G139100 [exp] 423 / 5e-149 AT1G14700 476 / 2e-169 purple acid phosphatase 3 (.1.2) Potri.015G031300 [exp] 410 / 4e-144 AT1G14700 444 / 5e-157 purple acid phosphatase 3 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031941 [exp] 413 / 2e-145 AT1G14700 426 / 2e-150 purple acid phosphatase 3 (.1.2) Lus10035100 [exp] 392 / 1e-134 AT1G14700 419 / 7e-145 purple acid phosphatase 3 (.1.2) Lus10019133 [exp] 353 / 7e-122 AT2G01890 417 / 5e-147 purple acid phosphatase 8 (.1.2) Lus10034429 [exp] 341 / 3e-117 AT1G14700 416 / 2e-146 purple acid phosphatase 3 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0163 [poplar] [flax] Calcineurin PF00149 [poplar] [flax] Metallophos Calcineurin-like phosphoesterase
Representative CDS sequence Show only first row Show all	>Potri.012G042200.1 pacid=42783179 polypeptide=Potri.012G042200.1.p locus=Potri.012G042200 ID=Potri.012G042200.1.v4.1 annot-version=v4.1 ATGGCAGCAGGTCTTAACAACGAATACATGGCTCTGTGCCTTGTTTTGATGATTAGTAGTTTTGGTTTGTGTTTGGTCTCGACACATGCAGAGCTTCGAA GGTTTGAACAACCTGCAAAAACTGACGGGACACTTTCCTTTCTGGTGCTTGGAGACTGGGGCAGAAAGGGTGCTTTCAACCAGTCTGAAGTTGCTCTTCA GATGGGAAGGATTGGAGAGAAGCTGGACATAGATTTTGTAGTATCAACAGGCGATAATTTCTATGATGACGGATTAATTGGTGAACAAGACAAAGCATTT GAGGAATCCTTTACCCAAATCTACACCGCCAAGAGCCTGCAAAAGCAGTGGTATAGTGTGTTGGGAAACCATGATTATAGAGGGAATGCGGAAGCACAGT TAAGCCTTCACCTCAGGAAAATAGATAGCAGGTGGCTTTGTTTGAGATCTTTCATTGTCGATGCTGAATTGGCTGAAATTTTCTTTGTGGACACCACCCC TTTTGTCCAATCTTACTTCACTGATGCCGAGGGCCATAATTATGACTGGAGAGGCATTGGTTCTCCTAGAGCTTACATCGCAAACCTAATAAAGGATCTA AAGTTGGCGTTGAGCGAATCAAGTGCAAAGTGGAAAATTGTCGTGGGTCATCACTCGATTAGAAGCATTGGACATCACGGGGACACTAAGGAACTTGTAA GCAAGCTTCTTCCAATCCTGAAGGCCAACAAAGTGGATTTTTACATGAATGGACATGACCATTGCCTTGAACACATCGGTGACGCTGAGAGCCCAATACA ATTTCTAACTAGTGGAGCTGGGTCTAAGGCATGGAGGGGTGACATTAAAAAACAAAAGACAGGTGGGCTAAAATTCTTCTATGATGGTCAAGGTTTCATG TCTGTGCAGTTGACTCAGGATGCAGCAGAGATTGCATTTTATGATGTTTCTGGCAATGTTTTGCATAGATGGACTACAACAAAGTTGCTTTACTCATCAA TATAA
AA sequence Show only first row Show all	>Potri.012G042200.1 pacid=42783179 polypeptide=Potri.012G042200.1.p locus=Potri.012G042200 ID=Potri.012G042200.1.v4.1 annot-version=v4.1 MAAGLNNEYMALCLVLMISSFGLCLVSTHAELRRFEQPAKTDGTLSFLVLGDWGRKGAFNQSEVALQMGRIGEKLDIDFVVSTGDNFYDDGLIGEQDKAF EESFTQIYTAKSLQKQWYSVLGNHDYRGNAEAQLSLHLRKIDSRWLCLRSFIVDAELAEIFFVDTTPFVQSYFTDAEGHNYDWRGIGSPRAYIANLIKDL KLALSESSAKWKIVVGHHSIRSIGHHGDTKELVSKLLPILKANKVDFYMNGHDHCLEHIGDAESPIQFLTSGAGSKAWRGDIKKQKTGGLKFFYDGQGFM SVQLTQDAAEIAFYDVSGNVLHRWTTTKLLYSSI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G17790		ATACP5, ATPAP17...	purple acid phosphatase 17 (.1...		Potri.012G042200 [exp]	0	1	ACP5.3
AT2G27140			HSP20-like chaperones superfam...		Potri.012G070100 [exp]	10.86	0.7899
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Potri.004G026100 [exp]	13.96	0.7676
AT2G47140		AtSDR5	short-chain dehydrogenase redu...		Potri.015G065700 [exp]	14.07	0.6853
AT3G47800			Galactose mutarotase-like supe...		Potri.017G080200 [exp]	31.17	0.7387
AT3G13540	MYB	ATMYB5, ATM2	myb domain protein 5 (.1)		Potri.003G219900 [exp]	34.23	0.7674
AT4G01500	B3	NGA4	NGATHA4, AP2/B3-like transcrip...		Potri.012G013501 [exp]	42.49	0.7097
AT3G61220		SDR1	short-chain dehydrogenase/redu...		Potri.014G080100 [exp]	42.57	0.7142
AT2G46680	HD	ATHB7, ATHB-7	ARABIDOPSIS THALIANA HOMEOBOX ...		Potri.012G023700 [exp]	58.99	0.7411
AT3G14470			NB-ARC domain-containing disea...		Potri.017G121700 [exp]	76.34	0.6986
AT5G18290		SIP1B, SIP1;2	SMALL AND BASIC INTRINSIC PROT...		Potri.002G227500 [exp]	79.49	0.6959

Compare expression of checked genes

Potri.012G042200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.