Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP71AP2v1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G26330 433 / 7e-148 CYP71B37 "cytochrome P450, family 71, subfamily B, polypeptide 37", cytochrome P450, family 71, subfamily B, polypeptide 37 (.1) AT3G26310 426 / 5e-145 CYP71B35 "cytochrome P450, family 71, subfamily B, polypeptide 35", cytochrome P450, family 71, subfamily B, polypeptide 35 (.1) AT3G26300 419 / 2e-142 CYP71B34 "cytochrome P450, family 71, subfamily B, polypeptide 34", cytochrome P450, family 71, subfamily B, polypeptide 34 (.1) AT3G48280 417 / 9e-142 CYP71A25 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) AT1G13080 415 / 5e-141 CYP71B2 "cytochrome P450, family 71, subfamily B, polypeptide 2", cytochrome P450, family 71, subfamily B, polypeptide 2 (.1.2) AT5G57260 410 / 3e-139 CYP71B10 "cytochrome P450, family 71, subfamily B, polypeptide 10", cytochrome P450, family 71, subfamily B, polypeptide 10 (.1) AT3G26210 409 / 1e-138 CYP71B23 "cytochrome P450, family 71, subfamily B, polypeptide 23", cytochrome P450, family 71, subfamily B, polypeptide 23 (.1) AT1G13110 409 / 1e-138 CYP71B7 "cytochrome P450, family 71 subfamily B, polypeptide 7", cytochrome P450, family 71 subfamily B, polypeptide 7 (.1) AT3G48270 409 / 2e-138 CYP71A26 "cytochrome P450, family 71, subfamily A, polypeptide 26", cytochrome P450, family 71, subfamily A, polypeptide 26 (.1) AT3G26320 408 / 3e-138 CYP71B36 "cytochrome P450, family 71, subfamily B, polypeptide 36", cytochrome P450, family 71, subfamily B, polypeptide 36 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G089900 [exp] 946 / 0 AT3G48280 429 / 1e-146 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Potri.015G086000 [exp] 913 / 0 AT1G13080 434 / 2e-148 "cytochrome P450, family 71, subfamily B, polypeptide 2", cytochrome P450, family 71, subfamily B, polypeptide 2 (.1.2) Potri.015G085800 [exp] 485 / 3e-168 AT3G48270 479 / 7e-166 "cytochrome P450, family 71, subfamily A, polypeptide 26", cytochrome P450, family 71, subfamily A, polypeptide 26 (.1) Potri.008G223500 [exp] 457 / 3e-157 AT3G26300 395 / 3e-133 "cytochrome P450, family 71, subfamily B, polypeptide 34", cytochrome P450, family 71, subfamily B, polypeptide 34 (.1) Potri.002G025800 [exp] 449 / 3e-154 AT4G31500 490 / 3e-170 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1) Potri.002G026500 [exp] 448 / 1e-153 AT4G31500 489 / 8e-170 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1) Potri.002G025500 [exp] 444 / 5e-152 AT4G31500 502 / 6e-175 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1) Potri.016G137600 [exp] 443 / 1e-151 AT3G48270 401 / 2e-135 "cytochrome P450, family 71, subfamily A, polypeptide 26", cytochrome P450, family 71, subfamily A, polypeptide 26 (.1) Potri.002G025350 [exp] 441 / 5e-151 AT4G31500 514 / 7e-180 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017961 [exp] 487 / 9e-169 AT3G48280 502 / 4e-175 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Lus10041951 [exp] 469 / 9e-162 AT3G48280 519 / 0.0 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Lus10016601 [exp] 469 / 1e-161 AT3G26320 402 / 6e-136 "cytochrome P450, family 71, subfamily B, polypeptide 36", cytochrome P450, family 71, subfamily B, polypeptide 36 (.1) Lus10043308 [exp] 459 / 6e-158 AT3G48280 463 / 5e-160 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Lus10006443 [exp] 455 / 4e-156 AT3G26310 366 / 2e-121 "cytochrome P450, family 71, subfamily B, polypeptide 35", cytochrome P450, family 71, subfamily B, polypeptide 35 (.1) Lus10019457 [exp] 454 / 5e-156 AT3G48280 467 / 2e-161 "cytochrome P450, family 71, subfamily A, polypeptide 25", cytochrome P450, family 71, subfamily A, polypeptide 25 (.1) Lus10033172 [exp] 437 / 1e-149 AT4G31500 540 / 0.0 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1) Lus10024315 [exp] 436 / 4e-149 AT4G31500 540 / 0.0 SUPERROOT 2, RUNT 1, RED ELONGATED 1, "cytochrome P450, family 83, subfamily B, polypeptide 1", ALTERED TRYPTOPHAN REGULATION 4, cytochrome P450, family 83, subfamily B, polypeptide 1 (.1) Lus10042815 [exp] 436 / 7e-149 AT1G13110 396 / 3e-133 "cytochrome P450, family 71 subfamily B, polypeptide 7", cytochrome P450, family 71 subfamily B, polypeptide 7 (.1) Lus10039063 [exp] 434 / 2e-147 AT3G26300 392 / 3e-131 "cytochrome P450, family 71, subfamily B, polypeptide 34", cytochrome P450, family 71, subfamily B, polypeptide 34 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.012G090000.1 pacid=42784032 polypeptide=Potri.012G090000.1.p locus=Potri.012G090000 ID=Potri.012G090000.1.v4.1 annot-version=v4.1 ATGGCTTTACTACAATGGCTGAAAGAATGCTCCAAACCTACCTTGCTCGTTGTAACTATTTTTCTAGTAGTAGTGCTCAAGTTTCTCATGAAGGAGAAGC TGAAAAAGAGGAAGCTCAATCTCCCACCAAGCCCTGCAAAATTGCCAATCATTGGTAACCTTCACCAGCTTGGTAATATGCCTCACATCTCTCTCCGAGG GCTTGCCAAGAAGTATGGTCCCATCATTTTCTTACAGCTTGGGGAGATCCCAACTGTAGTGATTTCATCAGCTGGATTGGCAAAAGAAGTCCTGAAAACT CATGATCTTGTACTCTCCAGCCGTCCGCAGCTCTTTTCGGCCAAACACTTGTTCTATGGTTGCACTGATATTGTTTTTGCTCCTTATGGTGCTTACTGGA GGAATATAAGGAAAATTTGCATACTTGAGCTACTCAGTGCCAAGCGTGTCCACTGGTACAGCTTTGTTAGAGAAGAAGAAGTTGCTCGCTTGATTCGTCG GATTGCAGAATCTTATCCTGGCATCACCAATCTAAGCTCGATGATTGCACTATATGCCAATGATGTTCTTTGTCGGATTGCGCTAGGAAAGGATTTCTCT GGAGGAGGAGAGTATGATCGGCACGGGTTCCAAAAGATGCTCGACGATTATCAAGCATTGCTTGGAGGATTCAGTCTTGGAGACTATTTTCCTTCGATGG AGTTTGTGCACAGTCTGACTGGAATGAAATCGAAACTCCAGTACACCTTCAGACGGTTTGATCAGTTCTTCGATGAGGTGATAGCTGAGCACCGCAGTTC TAAGGGAAAACAAGAGGAGGAGAAGGACCTTGTTGACGTTCTACTTGATATTCAGAAGGATGGATCTTCTGAAATTCCTCTCACCATGGATAACATTAAA GCTGTCATCTTGGACATGTTTGCTGCAGGAACAGATACCAACTTCATAACCCTTGATTGGGCAATGACAGAGCTTATCATGAATCCTCATGTCATGGAGA AAGCACAAGCTGAAGTACGAAGTGTTGTCGGAGACAGAAGAGTGGTGCAAGAGAGTGATCTGCGCCGGCTGAACTACATGAAAGCTGTTATCAAAGAGAT CTTCCGGTTACATCCTGCCGCTCCAGTTTTAGTCCCAAGAGAATCTTTAGAAGATGTTGTAATTGATGGCTACAACATTCCAGCTAAAACTCGGATTTAT GTCAATGTCTGGGGAATGGGGAGGGATCCAGAACTGTGGGAAAATCCTGAAACATTTGAACCGGAAAGATTTATGGGCAGCGGTATAGATTTCAAGGGGC AAGATTTTGAGCTGATACCATTTGGAGCAGGTAGAAGAAGCTGCCCAGCCATCACATTTGGGGTCGCAACCGTTGAAATTGCTTTAGCTCAACTCCTCCA CAGCTTTGATTGGAAGCTTCCTCCTGGTCTCGAAGCAAAGGATATAGACAATACAGAAGCTTTTGGCATCTCAATGCACAGGACAGTTCCCCTGCACGTC ATTGCAAAACCACACTTCGATTGA
AA sequence Show only first row Show all	>Potri.012G090000.1 pacid=42784032 polypeptide=Potri.012G090000.1.p locus=Potri.012G090000 ID=Potri.012G090000.1.v4.1 annot-version=v4.1 MALLQWLKECSKPTLLVVTIFLVVVLKFLMKEKLKKRKLNLPPSPAKLPIIGNLHQLGNMPHISLRGLAKKYGPIIFLQLGEIPTVVISSAGLAKEVLKT HDLVLSSRPQLFSAKHLFYGCTDIVFAPYGAYWRNIRKICILELLSAKRVHWYSFVREEEVARLIRRIAESYPGITNLSSMIALYANDVLCRIALGKDFS GGGEYDRHGFQKMLDDYQALLGGFSLGDYFPSMEFVHSLTGMKSKLQYTFRRFDQFFDEVIAEHRSSKGKQEEEKDLVDVLLDIQKDGSSEIPLTMDNIK AVILDMFAAGTDTNFITLDWAMTELIMNPHVMEKAQAEVRSVVGDRRVVQESDLRRLNYMKAVIKEIFRLHPAAPVLVPRESLEDVVIDGYNIPAKTRIY VNVWGMGRDPELWENPETFEPERFMGSGIDFKGQDFELIPFGAGRRSCPAITFGVATVEIALAQLLHSFDWKLPPGLEAKDIDNTEAFGISMHRTVPLHV IAKPHFD

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G26330		CYP71B37	"cytochrome P450, family 71, s...		Potri.012G090000 [exp]	0	1	CYP71AP2v1
AT1G02260			Divalent ion symporter (.1)		Potri.017G141800 [exp]	2.64	0.9532
AT5G49040			Disease resistance-responsive ...		Potri.006G195300 [exp]	7.48	0.9073
AT1G45616		AtRLP6	receptor like protein 6 (.1)		Potri.012G025400 [exp]	8.66	0.9415
AT5G36930			Disease resistance protein (TI...		Potri.013G097050 [exp]	9.21	0.9359
AT5G05340			Peroxidase superfamily protein...		Potri.013G156400 [exp]	13.74	0.9300
AT2G05940		RIPK	RPM1-induced protein kinase, P...		Potri.001G168000 [exp]	15.29	0.9302
AT3G21750		UGT71B1	UDP-glucosyl transferase 71B1 ...		Potri.016G017100 [exp]	15.74	0.9240
AT5G27060		AtRLP53	receptor like protein 53 (.1)		Potri.011G054500 [exp]	16.00	0.9365
AT2G29100		ATGLR2.9	GLUTAMATE RECEPTOR 2.9, gluta...		Potri.004G052600 [exp]	20.71	0.9206
AT5G22510		INV-E, At-A/N-I...	Arabidopsis alkaline/neutral i...		Potri.010G236100 [exp]	20.78	0.9195

Compare expression of checked genes

Potri.012G090000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.