Potri.012G092400 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT3G48430 803 / 0 JUMONJI JMJ12, REF6 Jumonji domain-containing protein 12, relative of early flowering 6 (.1)
AT5G04240 311 / 2e-86 JUMONJI ELF6 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
AT5G46910 257 / 2e-71 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT2G34880 202 / 3e-53 PKDM7C, MEE27 maternal effect embryo arrest 27, Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT1G30810 189 / 7e-49 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
AT4G20400 182 / 3e-46 PKDM7B, JMJ14 JUMONJI 14 (.1.2)
AT1G08620 175 / 6e-44 PKDM7D Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
AT1G63490 146 / 4e-35 transcription factor jumonji (jmjC) domain-containing protein (.1)
AT2G38950 126 / 3e-29 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT4G06634 59 / 2e-08 C2H2ZnF zinc finger (C2H2 type) family protein (.1), zinc finger (C2H2 type) family protein (.2), zinc finger (C2H2 type) family protein (.3)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.015G089000 2778 / 0 AT3G48430 807 / 0.0 Jumonji domain-containing protein 12, relative of early flowering 6 (.1)
Potri.008G037800 331 / 4e-92 AT5G04240 997 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Potri.010G224700 329 / 2e-91 AT5G04240 956 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Potri.003G096100 255 / 2e-70 AT5G46910 924 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Potri.001G137700 251 / 4e-69 AT5G46910 893 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Potri.013G046700 189 / 4e-48 AT1G08620 1281 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Potri.001G440900 187 / 1e-47 AT4G20400 733 / 0.0 JUMONJI 14 (.1.2)
Potri.019G018700 186 / 3e-47 AT1G08620 1260 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Potri.011G155100 167 / 2e-41 AT4G20400 707 / 0.0 JUMONJI 14 (.1.2)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10019482 855 / 0 AT3G48430 984 / 0.0 Jumonji domain-containing protein 12, relative of early flowering 6 (.1)
Lus10043332 747 / 0 AT3G48430 877 / 0.0 Jumonji domain-containing protein 12, relative of early flowering 6 (.1)
Lus10009218 332 / 9e-92 AT5G04240 993 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Lus10037989 328 / 2e-91 AT5G04240 988 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Lus10030988 256 / 5e-71 AT5G46910 850 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Lus10035385 254 / 3e-70 AT5G46910 843 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Lus10008063 184 / 4e-47 AT1G30810 901 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Lus10022024 159 / 1e-38 AT3G04490 1370 / 0.0 unknown protein
Lus10042566 159 / 2e-38 AT3G04490 1382 / 0.0 unknown protein
Lus10008495 140 / 5e-33 AT1G63490 916 / 0.0 transcription factor jumonji (jmjC) domain-containing protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0029 Cupin PF02373 JmjC JmjC domain, hydroxylase
CL0029 Cupin PF02375 JmjN jmjN domain
Representative CDS sequence
>Potri.012G092400.1 pacid=42783181 polypeptide=Potri.012G092400.1.p locus=Potri.012G092400 ID=Potri.012G092400.1.v4.1 annot-version=v4.1
ATGGCGGCTCCAAGTGGGTTAAGTCCAGAACCACCACAACCACCAACAAGTACAGAAGTATGTCAATGGCTAAAGAACTTACCTTTAGCACCTGAATACC
GTCCAACACAAGCTGAATTCCAAGATCCAATTGCTTACATTTTCAAAATTGAAAAAGAAGCTTCTCAATATGGAATCTGCAAAATTATCCCTCCTGTCTT
ACCCTCTGCTAAAAAAACCACTCTTTCCAACCTCAACCGCTCTCTCTCCGCCCGTAACGGTGACTCTTCTGCCCCCACATTCACCACACGGCAGCAGCAG
ATCGGATTCTGCCCCAGGAAACCTCGCCCTGTTCAAAAACCAGTGTGGCAGAGCGGTGAGACCTACACATTTCAAGAATTTGAAACCAAGGCTAAAAGCT
TTGAGAAGAATTATTTGAAGAAGTTCTCTAAGAAGGGAGGTCTTTCTCCATTAGAAATTGAAAACCTTTATTGGAAAGCTACTTTAGATAAGCCTTTTGC
TGTAGAATATGCTAATGATATGCCTGGTTCTGCGTTTTCGCCGAGGAAAAAGGAGGGACAAGGAGGGGTTGTTGGGGAGGGAATGTATGTGGGGGAAACT
GAGTGGAATATGAGGAGTGTTTCAAGGGCTAAAGGGTCCCTGTTGAGGTTTATGAAGGAGGAAATACCAGGGGTTACTTCGCCTATGGTTTATATTGGGA
TGATATTTAGTTGGTTTGCTTGGCATGTTGAGGATCATGATTTGCATAGCTTGAATTATATGCATATGGGTGCTGGGAAGACTTGGTATGGTGTGCCTAG
AGAGGCTGCTGTCGCATTTGAGGAAGTTGTTAGGGTTCATGGGTATGGTGGAGAGAATAATCCTCTTGTTACATTTGCTGTTCTCGGTGAGAAGACGACA
GTAATGTCACCTGAAGTATTTATCAGTGCAGGTGTACCATGCTGCAGGTTAGTTCAAAATGCCGGGGAGTTTGTGGTCACTTTCCCAAGAGCCTATCATT
CAGGGTTCAGTCATGGATTCAACTGTGGGGAGGCAGCCAATATTGCTACACCTGAATGGTTGACAGTTGCTAAAGATGCTGCTATTCGAAGAGCTTCAAT
CAATTACCCTCCTATGGTGTCTCATTTCCAGTTACTTTATGATCTTGCTCTTGAATTTTGTACAAGAATACCTGTGAACATCAGTGCTAAACCACGGAGT
TCAAGACTGAAAGATAAGCAAAAGGGTGAAGGAGAAACACTGGTTAAAGAGCAATTTGTGAAGAATATGATGCAGAATAATGACCTGCTTCATATTCTTG
GAAAAGGATCTTCAGTGGTGCTTCTTCCACGAAGTTCTTCAGACATTTCTGTTTGTTCAAACTTACGAGTTGGATCCCAGCTAAGAGATAACCCCACCCT
TGGATTAAGCAGCCAGAAGGATTTTATGAAATCCTCAAAAAGCTCAGGTTCTGATGACATCTTGATGGACGAGAACCAGGAAATTAATCAAGTGAAAGGC
TTCTTTTCAGTGAAAGCGAAGTTTGCTTCTTTGTGTGAAAGGAATAGGTTCTCCACAATAAACGGAAATGAATGCACACAGAGTATGAACATGAGTACTG
AAAGAGGTAGCCCCATTCATGGTGATAAGCTGTCAGATCAGAGACTGTTTTCATGCGTCACATGTGGAATTTTGAGCTTTGATTGTCTTGCCATCATTCA
ACCGAAAGAGGCAGCTTCTAGATACCTCATGTCAGCTGATTGTAGTTTCTTTAATGATTGGGTCGTTGGTTCTGGAGTAACTAGGGATGTTTTTACTGTT
GCTGGTGGGATTGCAAATATTCCTGAGCAGAATTCCTCAATGAGATGGGTGAGAAAGAATACCGTGGCTGGTTTATATGATGTCCCTGTTCAATCTCTTA
ATTACCAAATTCAGATGGCAGATCAAAGTGTTGAAGTGGCTTCCAGTTCTGCAAAACAGATGGAGTCTTCTGCTCTTGGCCTATTAGCTTTGAATTATGG
AAATTCGTCTGATTCTGAGGATGATCAGGTTGAAGCAGGTCTATCTTGCCATGATGAAACTAACTTCACAAACTGTTCATTAGAAAGCAAATATCAGGGT
CAGAGTTCTGCTTGCCCTTCTTACAAGCAGAAGTACTATGATGCTGAAACTGGTGGTCACCCTCTATCTCCATCAAAACATGATCAGCGGGGTGATGTTC
CTTTCAAAGCTATTGATATGTATCCAGAACATGGAGATAGGCCAGATAATTTCAAGGATAGAAGTGATGATACTCTTGGATGTTCTTTTGGATTCCCAGC
CAATAACCCTGCTTGCATTGAATCAAATGGTTTGGATGGTAGATACAGAGATCCGGTTTCAATACCACACATGTCTTTAAATTGTTCCCCAATTGTCCAT
GATACTGAAAAAACAAAGTTTAACAGGCCTACTGTACCAATAGAGAATCCAGATATGCCATTTACCCAAAGATCTGATAGAGACTCTTCGTGCTTGCACG
TGTTCTGTCTTGAGCATGCTGTAGAAATAGAACAACAACTTCGTCAAATCGGTGGAGTACATATATTCCTTCTTTGCCATCCAGAGTATCCCAGGATTGA
AGCAGAAGCAAAGTCAGTGTCAGAAGAATTGGGAATTGATCATCTATGGAATGACATTACTTTCAGAGATGCTGCCAAAGAGGATGAGGAGAGGATCCAG
TCAGCTTTGGATACTGAGGAAGCCATACCAGGGAATGGGGACTGGGCTGTAAAGTTGGGGATCAATCTTTTTTACAGTGCCAACCTCAGCCGATCTCCTC
TTTATAGTAAGCAGATGCCATACAATTCAGTTATATACAATGCCTTTGGTCGTGCTTCTCCAGTTAGTTCACCCCCAAAATTTAAGGTTTATGGAAGGAG
ATCTGGGAAGCCAAAAAAAGTTGTGGCAGGGAAATGGTGTGGAAAAGTTTGGATGTCAAATCAAGTTCATCCCTTTCTAGTGAAAAGGGATTTTGTATAT
CAAAATCAAGAACAAGAACAAGAAAGAAGCTTCCATGCTTTGGCCACTCCTGATGAAAAGCTTGAGAAAAAACCACAAACCATCCACAGAAATGAAACCA
GTAGAAAATCTGGGAGGAAGAGGAAAATAATAGCAGGGAGCAGGACTGTTAAGAAAGTTAAGTGTCTGGAAGCAGAAGAAGCAGATTCAGAAGACTCGGT
GGGGGATAATTCTCATAGGCAGCATATGAGAATTCACAATAGGAAAAACACTGAAGACATTGAGAGAGAGATTTCATATGATCTAGTAGAGGATAGCAAT
CAGCAGCATGGGAGCTACAGACGCAAATGGGCCAAATCTGTTGAGAGTGATGATGCAGTTTCAGATGATCCATTAGCTGAACATGTTCGTCAGCAGTATA
GGAGAATGCGTAGAAGCAAGCAAGCCAAATCTATCAAGAGGGAAAATACAGTTTCTTATGCTTCAGTGGAGAACAAGTTTCGAAAGCAGCTTAGGAGAGT
TCATAGAAGCGACCAAGCCAAATGTTCTGAGAGACGATGTGTAGCTTCTGATGACTCACTGGACGATAACAGTGATCAGTGGCATGGGAGAGCTCCAAGA
AGCACACTAGCAAAATATACTGAGAGGGAAGATGCAAATTCAGATGATTCACCAGAGGAGAGTTCTCGTTGGCAACATGGGAGAGTTTCTAGGAGCAAAC
TTTTGAGATATGTCAAAAAGGAAAGTGCAATTTCAGATGATTCATTGGAGAATGGCTTTAAACAGCACAACAAGAGGATATCAAGAGGCAAGCGAGCCCA
GGTCATTAAAAGGGATGATGTGGTTTCCGATGATTCATTGGATGAAAGTGCATTTCAGCAGCTCCCGAGATTTTCTAGGATCAAGCTAGCCAAATTAATT
GAGAGGGAAGATGCATTTTCAGATGGTTCGTTGGAGGAAAATATCCATCAGCAGCATGGAAGGATTCTTAGAAGCAAGCAATCCAAATTTGTTGAAAGGG
AAGATGCAATTTCAGATGATTCTCTTGAGGACAGTACTCACTGGCAGCACAGAAGAATTCCTAGAAGCAAAATGGCCAAATTTGTCGAGAGGGAAGATGC
AGCTTCAGATGATTTGCAGGAGGATGATGGTCATCAGCATCACAGAAGAATTCCAAAACGCAAAAAGGCCAACTCTATTGAGAGTGAAGATGTAGTTTCT
GATGATCTGTGGCAGAATAATATTCATCGGCACCTTAGGAAGACTCCTAGAGGCAAGCAACCCAATATAGTGGAGAGGGAAGAAGCTGTTTCAGATGACT
TACTGGAGAATAGTTCTGATCAGCAGGACAGGATTATTCTTCGAAGCAAGCAGAAGAAATCTTCAATGAAACAAGGGATTCCTCGGCAACTGAAACAGAG
TGCCCCTAAGATGATAAAAAAAGAGACCCCACAATTAATGAAACAAGAGAGACAAATAAAGCCAGAAACTCCTCAGCTTCGGTTTGGTAAAAGTGATATG
AATGCTAGACAGTTTGATTCACATGCTGAAGAGGAGCGAGGTGGACCTTGCATGCGCCTCAGGAAAAGACTCTCAAAGGCTCCAAAACAGTCGTTAACAA
GGCTGAAAGAGAAGCAGAACATCAAGAAAAAAGTGAAGGATGCTACAGCAGTGAAGGCTCCAGCTGGGCGAAAGAATGTTAAAATGAAAGACGAGGAGGC
AGAATATCAGTGTGACATTGACGGGTGCAGAATGAGTTTTGTATCGAAACAGGAGCTTGCACTGCACAAAAGAAACATTTGTCCAGTCAAGGGGTGTGGA
AAGAAGTTTTTCTCGCACAAATATCTGGTGCAGCATCGCCGAGTCCATATAGATGACCGCCCTCTCAAGTGCCCTTGGAAGGGATGCAAGATGACATTCA
AGTGGGCATGGGCCCGGACCGAACATATCAGGGTTCACACAGGTGCTCGTCCTTATGTATGTGCTGAGGAAGGCTGTGGCCAGACATTCAGATTTGTGTC
AGATTTCAGTCGTCACAAGCGGAAGACTGGTCATTTGGCAAAGAAAGGCCGGGGGTAA
AA sequence
>Potri.012G092400.1 pacid=42783181 polypeptide=Potri.012G092400.1.p locus=Potri.012G092400 ID=Potri.012G092400.1.v4.1 annot-version=v4.1
MAAPSGLSPEPPQPPTSTEVCQWLKNLPLAPEYRPTQAEFQDPIAYIFKIEKEASQYGICKIIPPVLPSAKKTTLSNLNRSLSARNGDSSAPTFTTRQQQ
IGFCPRKPRPVQKPVWQSGETYTFQEFETKAKSFEKNYLKKFSKKGGLSPLEIENLYWKATLDKPFAVEYANDMPGSAFSPRKKEGQGGVVGEGMYVGET
EWNMRSVSRAKGSLLRFMKEEIPGVTSPMVYIGMIFSWFAWHVEDHDLHSLNYMHMGAGKTWYGVPREAAVAFEEVVRVHGYGGENNPLVTFAVLGEKTT
VMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLTVAKDAAIRRASINYPPMVSHFQLLYDLALEFCTRIPVNISAKPRS
SRLKDKQKGEGETLVKEQFVKNMMQNNDLLHILGKGSSVVLLPRSSSDISVCSNLRVGSQLRDNPTLGLSSQKDFMKSSKSSGSDDILMDENQEINQVKG
FFSVKAKFASLCERNRFSTINGNECTQSMNMSTERGSPIHGDKLSDQRLFSCVTCGILSFDCLAIIQPKEAASRYLMSADCSFFNDWVVGSGVTRDVFTV
AGGIANIPEQNSSMRWVRKNTVAGLYDVPVQSLNYQIQMADQSVEVASSSAKQMESSALGLLALNYGNSSDSEDDQVEAGLSCHDETNFTNCSLESKYQG
QSSACPSYKQKYYDAETGGHPLSPSKHDQRGDVPFKAIDMYPEHGDRPDNFKDRSDDTLGCSFGFPANNPACIESNGLDGRYRDPVSIPHMSLNCSPIVH
DTEKTKFNRPTVPIENPDMPFTQRSDRDSSCLHVFCLEHAVEIEQQLRQIGGVHIFLLCHPEYPRIEAEAKSVSEELGIDHLWNDITFRDAAKEDEERIQ
SALDTEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYNAFGRASPVSSPPKFKVYGRRSGKPKKVVAGKWCGKVWMSNQVHPFLVKRDFVY
QNQEQEQERSFHALATPDEKLEKKPQTIHRNETSRKSGRKRKIIAGSRTVKKVKCLEAEEADSEDSVGDNSHRQHMRIHNRKNTEDIEREISYDLVEDSN
QQHGSYRRKWAKSVESDDAVSDDPLAEHVRQQYRRMRRSKQAKSIKRENTVSYASVENKFRKQLRRVHRSDQAKCSERRCVASDDSLDDNSDQWHGRAPR
STLAKYTEREDANSDDSPEESSRWQHGRVSRSKLLRYVKKESAISDDSLENGFKQHNKRISRGKRAQVIKRDDVVSDDSLDESAFQQLPRFSRIKLAKLI
EREDAFSDGSLEENIHQQHGRILRSKQSKFVEREDAISDDSLEDSTHWQHRRIPRSKMAKFVEREDAASDDLQEDDGHQHHRRIPKRKKANSIESEDVVS
DDLWQNNIHRHLRKTPRGKQPNIVEREEAVSDDLLENSSDQQDRIILRSKQKKSSMKQGIPRQLKQSAPKMIKKETPQLMKQERQIKPETPQLRFGKSDM
NARQFDSHAEEERGGPCMRLRKRLSKAPKQSLTRLKEKQNIKKKVKDATAVKAPAGRKNVKMKDEEAEYQCDIDGCRMSFVSKQELALHKRNICPVKGCG
KKFFSHKYLVQHRRVHIDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEEGCGQTFRFVSDFSRHKRKTGHLAKKGRG

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT3G48430 JUMONJI JMJ12, REF6 Jumonji domain-containing prot... Potri.012G092400 0 1
AT1G31930 XLG3 extra-large GTP-binding protei... Potri.001G135300 1.41 0.8208
AT5G47790 FHA SMAD/FHA domain-containing pro... Potri.016G003800 2.82 0.7547
AT5G43310 COP1-interacting protein-relat... Potri.010G070200 5.65 0.7206
AT3G48430 JUMONJI JMJ12, REF6 Jumonji domain-containing prot... Potri.015G089000 5.83 0.8049
AT4G02070 ATMSH6, MSH6-1 MUTS HOMOLOG 6-1, ARABIDOPSIS... Potri.014G121601 13.30 0.7591
AT4G12560 CPR1, CPR30 CONSTITUTIVE EXPRESSER OF PR G... Potri.010G154601 16.43 0.7506
AT2G06040 unknown protein Potri.006G142200 16.61 0.7325
AT4G24560 UBP16 ubiquitin-specific protease 16... Potri.002G104800 17.32 0.7454 UBP16.2
AT5G19420 Regulator of chromosome conden... Potri.009G071800 18.43 0.7199
AT3G51060 SRS1, STY1 STYLISH 1, SHI RELATED SEQUENC... Potri.005G118200 21.02 0.7050 SHI2,Pt-STY1.2

Potri.012G092400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.